RNA–Protein interactions for RNA: ENST00000540445.5

LMO3-222, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-222ENST00000540445 RAPGEF1Q13905 1077 aa9.35□□□□□ -0.91
LMO3-222ENST00000540445 KCNJ12Q14500 433 aa9.35□□□□□ -0.91
LMO3-222ENST00000540445 TAF5Q15542 800 aa9.35□□□□□ -0.91
LMO3-222ENST00000540445 MEA1Q16626 185 aa9.35□□□□□ -0.91
LMO3-222ENST00000540445 DUOXA1Q1HG43 343 aa9.35□□□□□ -0.91
LMO3-222ENST00000540445 FAM133BQ5BKY9 247 aaKnown RBP9.35□□□□□ -0.91
LMO3-222ENST00000540445 ZC3H12AQ5D1E8 599 aaKnown RBP9.35□□□□□ -0.91
LMO3-222ENST00000540445 MPP7Q5T2T1 576 aa9.35□□□□□ -0.91
LMO3-222ENST00000540445 MBLAC2Q68D91 279 aa9.35□□□□□ -0.91
LMO3-222ENST00000540445 OR6B2Q6IFH4 312 aa9.35□□□□□ -0.91
LMO3-222ENST00000540445 SLC23A3Q6PIS1 610 aa9.35□□□□□ -0.91
LMO3-222ENST00000540445 ADIPOR2Q86V24 386 aa9.35□□□□□ -0.91
LMO3-222ENST00000540445 CACUL1Q86Y37 369 aa9.35□□□□□ -0.91
LMO3-222ENST00000540445 ZNF366Q8N895 744 aa9.35□□□□□ -0.91
LMO3-222ENST00000540445 ZNF557Q8N988 423 aaPredicted RBP9.35□□□□□ -0.91
LMO3-222ENST00000540445 HJURPQ8NCD3 748 aaPredicted RBP9.35□□□□□ -0.91
LMO3-222ENST00000540445 FIBINQ8TAL6 211 aa9.35□□□□□ -0.91
LMO3-222ENST00000540445 CEP76Q8TAP6 659 aa9.35□□□□□ -0.91
LMO3-222ENST00000540445 SHC3Q92529 594 aa9.35□□□□□ -0.91
LMO3-222ENST00000540445 TMEM131Q92545 1883 aa9.35□□□□□ -0.91
LMO3-222ENST00000540445 FOXJ1Q92949 421 aa9.35□□□□□ -0.91
LMO3-222ENST00000540445 FCRL2Q96LA5 508 aaPredicted RBP9.35□□□□□ -0.91
LMO3-222ENST00000540445 HSPA12BQ96MM6 686 aa9.35□□□□□ -0.91
LMO3-222ENST00000540445 GTPBP2Q9BX10 602 aaKnown RBP9.35□□□□□ -0.91
LMO3-222ENST00000540445 GPR174Q9BXC1 333 aa9.35□□□□□ -0.91
LMO3-222ENST00000540445 IRX2Q9BZI1 471 aaPredicted RBP9.35□□□□□ -0.91
LMO3-222ENST00000540445 MKRN2Q9H000 416 aaKnown RBP9.35□□□□□ -0.91
LMO3-222ENST00000540445 CD93Q9NPY3 652 aa9.35□□□□□ -0.91
LMO3-222ENST00000540445 SAMSN1Q9NSI8 373 aaKnown RBP9.35□□□□□ -0.91
LMO3-222ENST00000540445 LMBRD1Q9NUN5 540 aa9.35□□□□□ -0.91
LMO3-222ENST00000540445 TJP2Q9UDY2 1190 aa9.35□□□□□ -0.91
LMO3-222ENST00000540445 SUN2Q9UH99 717 aa9.35□□□□□ -0.91
LMO3-222ENST00000540445 CYTH4Q9UIA0 394 aa9.35□□□□□ -0.91
LMO3-222ENST00000540445 CEP83Q9Y592 693 aa9.35□□□□□ -0.91
LMO3-222ENST00000540445 DOCK4Q8N1I0 1966 aa9.34□□□□□ -0.91
LMO3-222ENST00000540445 MEI4A8MW99 385 aa9.34□□□□□ -0.91
LMO3-222ENST00000540445 MOCS3O95396 460 aa9.34□□□□□ -0.91
LMO3-222ENST00000540445 DLDP09622 509 aaKnown RBP9.34□□□□□ -0.91
LMO3-222ENST00000540445 PNMA6AP0CW24 399 aaPredicted RBP9.34□□□□□ -0.91
LMO3-222ENST00000540445 SLC2A3P11169 496 aa9.34□□□□□ -0.91
LMO3-222ENST00000540445 GNSP15586 552 aa9.34□□□□□ -0.91
LMO3-222ENST00000540445 ENGP17813 658 aa9.34□□□□□ -0.91
LMO3-222ENST00000540445 ABCB4P21439 1286 aa9.34□□□□□ -0.91
LMO3-222ENST00000540445 MAOBP27338 520 aa9.34□□□□□ -0.91
LMO3-222ENST00000540445 OXTRP30559 389 aa9.34□□□□□ -0.91
LMO3-222ENST00000540445 CD70P32970 193 aa9.34□□□□□ -0.91
LMO3-222ENST00000540445 CLCN1P35523 988 aa9.34□□□□□ -0.91
LMO3-222ENST00000540445 TPMTP51580 245 aa9.34□□□□□ -0.91
LMO3-222ENST00000540445 RNASE9P60153 205 aaKnown RBP9.34□□□□□ -0.91
LMO3-222ENST00000540445 ST8SIA6P61647 398 aa9.34□□□□□ -0.91
LMO3-222ENST00000540445 RPS24P62847 133 aaKnown RBP9.34□□□□□ -0.91
LMO3-222ENST00000540445 SHC2P98077 582 aa9.34□□□□□ -0.91
LMO3-222ENST00000540445 CDK17Q00537 523 aa9.34□□□□□ -0.91
LMO3-222ENST00000540445 NNTQ13423 1086 aa9.34□□□□□ -0.91
LMO3-222ENST00000540445 CDH18Q13634 790 aa9.34□□□□□ -0.91
LMO3-222ENST00000540445 DRAP1Q14919 205 aaPredicted RBP9.34□□□□□ -0.91
LMO3-222ENST00000540445 MS4A13Q5J8X5 152 aa9.34□□□□□ -0.91
LMO3-222ENST00000540445 CT47A1Q5JQC4 288 aaPredicted RBP9.34□□□□□ -0.91
LMO3-222ENST00000540445 MIIPQ5JXC2 388 aa9.34□□□□□ -0.91
LMO3-222ENST00000540445 WDR45BQ5MNZ6 344 aa9.34□□□□□ -0.91
LMO3-222ENST00000540445 RAP1GAP2Q684P5 730 aa9.34□□□□□ -0.91
LMO3-222ENST00000540445 NADSYN1Q6IA69 706 aa9.34□□□□□ -0.91
LMO3-222ENST00000540445 PSAPL1Q6NUJ1 521 aa9.34□□□□□ -0.91
LMO3-222ENST00000540445 C11orf57Q6ZUT1 292 aaPredicted RBP9.34□□□□□ -0.91
LMO3-222ENST00000540445 BEND5Q7L4P6 421 aa9.34□□□□□ -0.91
LMO3-222ENST00000540445 RABEPKQ7Z6M1 372 aa9.34□□□□□ -0.91
LMO3-222ENST00000540445 METTL3Q86U44 580 aaKnown RBP9.34□□□□□ -0.91
LMO3-222ENST00000540445 TAC4Q86UU9 113 aa9.34□□□□□ -0.91
LMO3-222ENST00000540445 FAM124AQ86V42 546 aa9.34□□□□□ -0.91
LMO3-222ENST00000540445 SLC47A2Q86VL8 602 aa9.34□□□□□ -0.91
LMO3-222ENST00000540445 SLC41A1Q8IVJ1 513 aa9.34□□□□□ -0.91
LMO3-222ENST00000540445 LGI2Q8N0V4 545 aa9.34□□□□□ -0.91
LMO3-222ENST00000540445 DEFB106AQ8N104 65 aa9.34□□□□□ -0.91
LMO3-222ENST00000540445 WDTC1Q8N5D0 677 aa9.34□□□□□ -0.91
LMO3-222ENST00000540445 ATP6V0D2Q8N8Y2 350 aa9.34□□□□□ -0.91
LMO3-222ENST00000540445 WFDC5Q8TCV5 224 aa9.34□□□□□ -0.91
LMO3-222ENST00000540445 TOE1Q96GM8 510 aaKnown RBP9.34□□□□□ -0.91
LMO3-222ENST00000540445 ZNF419Q96HQ0 510 aaPredicted RBP9.34□□□□□ -0.91
LMO3-222ENST00000540445 BTN2A3PQ96KV6 586 aa9.34□□□□□ -0.91
LMO3-222ENST00000540445 GBP4Q96PP9 640 aa9.34□□□□□ -0.91
LMO3-222ENST00000540445 CPXM1Q96SM3 734 aa9.34□□□□□ -0.91
LMO3-222ENST00000540445 NUP58Q9BVL2 599 aa9.34□□□□□ -0.91
LMO3-222ENST00000540445 NUCKS1Q9H1E3 243 aaKnown RBP9.34□□□□□ -0.91
LMO3-222ENST00000540445 MIR1-1HGQ9H1L0 117 aa9.34□□□□□ -0.91
LMO3-222ENST00000540445 LHX5Q9H2C1 402 aa9.34□□□□□ -0.91
LMO3-222ENST00000540445 FAM204AQ9H8W3 233 aa9.34□□□□□ -0.91
LMO3-222ENST00000540445 SIX2Q9NPC8 291 aa9.34□□□□□ -0.91
LMO3-222ENST00000540445 PLCB1Q9NQ66 1216 aa9.34□□□□□ -0.91
LMO3-222ENST00000540445 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.34□□□□□ -0.91
LMO3-222ENST00000540445 WSB2Q9NYS7 404 aaPredicted RBP9.34□□□□□ -0.91
LMO3-222ENST00000540445 PCDHGC3Q9UN70 934 aa9.34□□□□□ -0.91
LMO3-222ENST00000540445 SLC6A14Q9UN76 642 aa9.34□□□□□ -0.91
LMO3-222ENST00000540445 DOCK9Q9BZ29 2069 aa9.34□□□□□ -0.91
LMO3-222ENST00000540445 USP24Q9UPU5 2620 aa9.34□□□□□ -0.91
LMO3-222ENST00000540445 KCNU1A8MYU2 1149 aa9.33□□□□□ -0.92
LMO3-222ENST00000540445 F5H5T6 163 aa9.33□□□□□ -0.92
LMO3-222ENST00000540445 GOLGA6L22H0YM25 854 aa9.33□□□□□ -0.92
LMO3-222ENST00000540445 GIPC1O14908 333 aa9.33□□□□□ -0.92
LMO3-222ENST00000540445 TPM2P07951 284 aa9.33□□□□□ -0.92
LMO3-222ENST00000540445 GLI1P08151 1106 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms