RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 ANKRD13BQ86YJ7 626 aa9.73□□□□□ -0.85
CTNNA1-243ENST00000540387 LILRA2Q8N149 483 aa9.73□□□□□ -0.85
CTNNA1-243ENST00000540387 SYTL5Q8TDW5 730 aaPredicted RBP9.73□□□□□ -0.85
CTNNA1-243ENST00000540387 CRYGNQ8WXF5 182 aa9.73□□□□□ -0.85
CTNNA1-243ENST00000540387 ZIC5Q96T25 663 aa9.73□□□□□ -0.85
CTNNA1-243ENST00000540387 ZNF395Q9H8N7 513 aaPredicted RBP9.73□□□□□ -0.85
CTNNA1-243ENST00000540387 PCDH12Q9NPG4 1184 aa9.73□□□□□ -0.85
CTNNA1-243ENST00000540387 CNTN3Q9P232 1028 aa9.73□□□□□ -0.85
CTNNA1-243ENST00000540387 DNAJC12Q9UKB3 198 aa9.73□□□□□ -0.85
CTNNA1-243ENST00000540387 SLC30A1Q9Y6M5 507 aa9.73□□□□□ -0.85
CTNNA1-243ENST00000540387 I3L4J1 428 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 ARHGAP33O14559 1287 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 KLF11O14901 512 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 BMPR1AP36894 532 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 NKX2-5P52952 324 aaPredicted RBP9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 DLG4P78352 724 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 TWF2Q6IBS0 349 aaKnown RBP9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 GALNT18Q6P9A2 607 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 SLC30A10Q6XR72 485 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 LSMEM2Q8N112 164 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 HM13Q8TCT9 377 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 OSCP1Q8WVF1 389 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 SLC35C1Q96A29 364 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 TAAR1Q96RJ0 339 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 UIMC1Q96RL1 719 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 FAM118BQ9BPY3 351 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 EBF4Q9BQW3 602 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 C2orf49Q9BVC5 232 aaPredicted RBP9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 SHCBP1LQ9BZQ2 653 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 GPR88Q9GZN0 384 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 PPME1Q9Y570 386 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 C1orf232A0A0U1RR37 186 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 ARHGEF37A1IGU5 675 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 POTEMA6NI47 508 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 SDR42E2A6NKP2 422 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 FAM155AB1AL88 458 aaPredicted RBP9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 EML1O00423 815 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 DYNC1LI2O43237 492 aaPredicted RBP9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 SLC37A4O43826 429 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 AKAP3O75969 853 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 SLC10A3P09131 477 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 MSL3P1P0C860 447 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 ITGAXP20702 1163 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 ADSSP30520 456 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 SREBF1P36956 1147 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 NR4A2P43354 598 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 ATP6V0D1P61421 351 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 MRPS22P82650 360 aaKnown RBP9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 CHRNEQ04844 493 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 GALNT2Q10471 571 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 BST1Q10588 318 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 CCDC142Q17RM4 750 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 CLEC16AQ2KHT3 1053 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 PPM1LQ5SGD2 360 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 ZNF618Q5T7W0 954 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 ADGRD1Q6QNK2 874 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 CARM1Q86X55 608 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 GALNT13Q8IUC8 556 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 RIOX2Q8IUF8 465 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 KIAA2013Q8IYS2 634 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 CLIP4Q8N3C7 705 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 CYP2W1Q8TAV3 490 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 SLC20A1Q8WUM9 679 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 ZNF486Q96H40 463 aaPredicted RBP9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 C7orf26Q96N11 449 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 DOK1Q99704 481 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 AGPAT1Q99943 283 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 FRMD8Q9BZ67 464 aaPredicted RBP9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 HOXD1Q9GZZ0 328 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 ACAD9Q9H845 621 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 CXorf21Q9HAI6 301 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 PNPLA3Q9NST1 481 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 ITGA11Q9UKX5 1188 aa9.72□□□□□ -0.85
CTNNA1-243ENST00000540387 C7orf72A4D263 438 aa9.71□□□□□ -0.85
CTNNA1-243ENST00000540387 GABBR2O75899 941 aa9.71□□□□□ -0.85
CTNNA1-243ENST00000540387 DDHD2O94830 711 aa9.71□□□□□ -0.85
CTNNA1-243ENST00000540387 PRKCAP17252 672 aa9.71□□□□□ -0.85
CTNNA1-243ENST00000540387 OTUD4Q01804 1114 aaKnown RBP9.71□□□□□ -0.85
CTNNA1-243ENST00000540387 GHRHRQ02643 423 aa9.71□□□□□ -0.85
CTNNA1-243ENST00000540387 FSTL1Q12841 308 aa9.71□□□□□ -0.85
CTNNA1-243ENST00000540387 STX3Q13277 289 aa9.71□□□□□ -0.85
CTNNA1-243ENST00000540387 CDONQ4KMG0 1287 aa9.71□□□□□ -0.85
CTNNA1-243ENST00000540387 TMEM119Q4V9L6 283 aa9.71□□□□□ -0.85
CTNNA1-243ENST00000540387 PERM1Q5SV97 790 aa9.71□□□□□ -0.85
CTNNA1-243ENST00000540387 GPR107Q5VW38 600 aa9.71□□□□□ -0.85
CTNNA1-243ENST00000540387 KRT80Q6KB66 452 aa9.71□□□□□ -0.85
CTNNA1-243ENST00000540387 CYP4V2Q6ZWL3 525 aaPredicted RBP9.71□□□□□ -0.85
CTNNA1-243ENST00000540387 TAS2R42Q7RTR8 314 aa9.71□□□□□ -0.85
CTNNA1-243ENST00000540387 FIBCD1Q8N539 461 aa9.71□□□□□ -0.85
CTNNA1-243ENST00000540387 LSMEM1Q8N8F7 131 aa9.71□□□□□ -0.85
CTNNA1-243ENST00000540387 ZNF420Q8TAQ5 688 aaPredicted RBP9.71□□□□□ -0.85
CTNNA1-243ENST00000540387 ETNPPLQ8TBG4 499 aa9.71□□□□□ -0.85
CTNNA1-243ENST00000540387 GJA10Q969M2 543 aa9.71□□□□□ -0.85
CTNNA1-243ENST00000540387 PAFAH2Q99487 392 aa9.71□□□□□ -0.85
CTNNA1-243ENST00000540387 PKP2Q99959 881 aa9.71□□□□□ -0.85
CTNNA1-243ENST00000540387 THAP1Q9NVV9 213 aa9.71□□□□□ -0.85
CTNNA1-243ENST00000540387 GTF3C4Q9UKN8 822 aa9.71□□□□□ -0.85
CTNNA1-243ENST00000540387 SLC8A2Q9UPR5 921 aa9.71□□□□□ -0.85
CTNNA1-243ENST00000540387 EXOC7Q9UPT5 735 aa9.71□□□□□ -0.85
CTNNA1-243ENST00000540387 SORCS3Q9UPU3 1222 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms