RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 ABCB4P21439 1286 aa18.94■□□□□ 0.62
SNRPA1-203ENST00000540017 NTSR1P30989 418 aa18.94■□□□□ 0.62
SNRPA1-203ENST00000540017 CD70P32970 193 aa18.94■□□□□ 0.62
SNRPA1-203ENST00000540017 GGCXP38435 758 aa18.94■□□□□ 0.62
SNRPA1-203ENST00000540017 GSCP56915 257 aaPredicted RBP18.94■□□□□ 0.62
SNRPA1-203ENST00000540017 DEUP1Q05D60 604 aa18.94■□□□□ 0.62
SNRPA1-203ENST00000540017 EOGTQ5NDL2 527 aa18.94■□□□□ 0.62
SNRPA1-203ENST00000540017 SH3PXD2AQ5TCZ1 1133 aa18.94■□□□□ 0.62
SNRPA1-203ENST00000540017 ACAD10Q6JQN1 1059 aa18.94■□□□□ 0.62
SNRPA1-203ENST00000540017 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.94■□□□□ 0.62
SNRPA1-203ENST00000540017 TSTD1Q8NFU3 115 aa18.94■□□□□ 0.62
SNRPA1-203ENST00000540017 CPLX3Q8WVH0 158 aa18.94■□□□□ 0.62
SNRPA1-203ENST00000540017 ERLEC1Q96DZ1 483 aa18.94■□□□□ 0.62
SNRPA1-203ENST00000540017 NUP58Q9BVL2 599 aa18.94■□□□□ 0.62
SNRPA1-203ENST00000540017 EPC1Q9H2F5 836 aa18.94■□□□□ 0.62
SNRPA1-203ENST00000540017 CD248Q9HCU0 757 aa18.94■□□□□ 0.62
SNRPA1-203ENST00000540017 ELOVL2Q9NXB9 296 aa18.94■□□□□ 0.62
SNRPA1-203ENST00000540017 ARHGEF38Q9NXL2 777 aa18.94■□□□□ 0.62
SNRPA1-203ENST00000540017 CACNA2D2Q9NY47 1150 aa18.94■□□□□ 0.62
SNRPA1-203ENST00000540017 EBF1Q9UH73 591 aa18.94■□□□□ 0.62
SNRPA1-203ENST00000540017 SLC12A6Q9UHW9 1150 aa18.94■□□□□ 0.62
SNRPA1-203ENST00000540017 ZFHX2Q9C0A1 2572 aaPredicted RBP18.94■□□□□ 0.62
SNRPA1-203ENST00000540017 CCDC163A0A0D9SF12 145 aa18.93■□□□□ 0.62
SNRPA1-203ENST00000540017 A0A1W2PQF6 199 aa18.93■□□□□ 0.62
SNRPA1-203ENST00000540017 C2CD4BA6NLJ0 364 aa18.93■□□□□ 0.62
SNRPA1-203ENST00000540017 AXIN1O15169 862 aa18.93■□□□□ 0.62
SNRPA1-203ENST00000540017 LMNAP02545 664 aaKnown RBP18.93■□□□□ 0.62
SNRPA1-203ENST00000540017 GYPCP04921 128 aa18.93■□□□□ 0.62
SNRPA1-203ENST00000540017 CALB1P05937 261 aa18.93■□□□□ 0.62
SNRPA1-203ENST00000540017 RFC1P35251 1148 aaPredicted RBP18.93■□□□□ 0.62
SNRPA1-203ENST00000540017 IRAK1P51617 712 aa18.93■□□□□ 0.62
SNRPA1-203ENST00000540017 DGKEP52429 567 aa18.93■□□□□ 0.62
SNRPA1-203ENST00000540017 C1QBPQ07021 282 aaKnown RBP18.93■□□□□ 0.62
SNRPA1-203ENST00000540017 KLHL30Q0D2K2 578 aa18.93■□□□□ 0.62
SNRPA1-203ENST00000540017 C15orf59Q2T9L4 293 aaPredicted RBP18.93■□□□□ 0.62
SNRPA1-203ENST00000540017 CCDC14Q49A88 953 aa18.93■□□□□ 0.62
SNRPA1-203ENST00000540017 FSCBQ5H9T9 825 aa18.93■□□□□ 0.62
SNRPA1-203ENST00000540017 HGSNATQ68CP4 663 aa18.93■□□□□ 0.62
SNRPA1-203ENST00000540017 ANO7Q6IWH7 933 aa18.93■□□□□ 0.62
SNRPA1-203ENST00000540017 KIAA1211LQ6NV74 962 aa18.93■□□□□ 0.62
SNRPA1-203ENST00000540017 FBXL22Q6P050 247 aa18.93■□□□□ 0.62
SNRPA1-203ENST00000540017 C14orf80Q86SX3 495 aa18.93■□□□□ 0.62
SNRPA1-203ENST00000540017 ADIPOR2Q86V24 386 aa18.93■□□□□ 0.62
SNRPA1-203ENST00000540017 RASSF3Q86WH2 238 aa18.93■□□□□ 0.62
SNRPA1-203ENST00000540017 CIR1Q86X95 450 aaPredicted RBP18.93■□□□□ 0.62
SNRPA1-203ENST00000540017 CHPFQ8IZ52 775 aa18.93■□□□□ 0.62
SNRPA1-203ENST00000540017 MCOLN2Q8IZK6 566 aa18.93■□□□□ 0.62
SNRPA1-203ENST00000540017 C3orf20Q8ND61 904 aa18.93■□□□□ 0.62
SNRPA1-203ENST00000540017 MDGA1Q8NFP4 955 aa18.93■□□□□ 0.62
SNRPA1-203ENST00000540017 FIBINQ8TAL6 211 aa18.93■□□□□ 0.62
SNRPA1-203ENST00000540017 RXFP2Q8WXD0 754 aa18.93■□□□□ 0.62
SNRPA1-203ENST00000540017 IGSF8Q969P0 613 aa18.93■□□□□ 0.62
SNRPA1-203ENST00000540017 TKTL2Q9H0I9 626 aa18.93■□□□□ 0.62
SNRPA1-203ENST00000540017 WDCPQ9H6R7 721 aa18.93■□□□□ 0.62
SNRPA1-203ENST00000540017 GGA2Q9UJY4 613 aa18.93■□□□□ 0.62
SNRPA1-203ENST00000540017 CAPN11Q9UMQ6 739 aa18.93■□□□□ 0.62
SNRPA1-203ENST00000540017 SNX10Q9Y5X0 201 aa18.93■□□□□ 0.62
SNRPA1-203ENST00000540017 HS3ST4Q9Y661 456 aa18.93■□□□□ 0.62
SNRPA1-203ENST00000540017 TMCO5BA8MYB1 307 aa18.92■□□□□ 0.62
SNRPA1-203ENST00000540017 F5H5T6 163 aa18.92■□□□□ 0.62
SNRPA1-203ENST00000540017 DDX3XO00571 662 aaKnown RBP eCLIP18.92■□□□□ 0.622e-19■■■□□ 18.1
SNRPA1-203ENST00000540017 ENDOD1O94919 500 aa18.92■□□□□ 0.62
SNRPA1-203ENST00000540017 PABPC1P11940 636 aaKnown RBP18.92■□□□□ 0.62
SNRPA1-203ENST00000540017 HOXB2P14652 356 aa18.92■□□□□ 0.62
SNRPA1-203ENST00000540017 PDGFRAP16234 1089 aa18.92■□□□□ 0.62
SNRPA1-203ENST00000540017 ATP11AP98196 1134 aa18.92■□□□□ 0.62
SNRPA1-203ENST00000540017 LMAN2Q12907 356 aa18.92■□□□□ 0.62
SNRPA1-203ENST00000540017 AUHQ13825 339 aaKnown RBP18.92■□□□□ 0.62
SNRPA1-203ENST00000540017 BRMS1LQ5PSV4 323 aa18.92■□□□□ 0.62
SNRPA1-203ENST00000540017 ARTNQ5T4W7 220 aa18.92■□□□□ 0.62
SNRPA1-203ENST00000540017 CHST9Q7L1S5 443 aa18.92■□□□□ 0.62
SNRPA1-203ENST00000540017 TRMT11Q7Z4G4 463 aaKnown RBP18.92■□□□□ 0.62
SNRPA1-203ENST00000540017 MFN1Q8IWA4 741 aa18.92■□□□□ 0.62
SNRPA1-203ENST00000540017 CARNMT1Q8N4J0 409 aa18.92■□□□□ 0.62
SNRPA1-203ENST00000540017 GABRG3Q99928 467 aa18.92■□□□□ 0.62
SNRPA1-203ENST00000540017 TPSD1Q9BZJ3 242 aa18.92■□□□□ 0.62
SNRPA1-203ENST00000540017 CIPCQ9C0C6 399 aa18.92■□□□□ 0.62
SNRPA1-203ENST00000540017 SIK2Q9H0K1 926 aa18.92■□□□□ 0.62
SNRPA1-203ENST00000540017 THAP10Q9P2Z0 257 aaPredicted RBP18.92■□□□□ 0.62
SNRPA1-203ENST00000540017 INTS6Q9UL03 887 aaKnown RBP18.92■□□□□ 0.62
SNRPA1-203ENST00000540017 RAD54BQ9Y620 910 aa18.92■□□□□ 0.62
SNRPA1-203ENST00000540017 STON1Q9Y6Q2 735 aa18.92■□□□□ 0.62
SNRPA1-203ENST00000540017 SIGLEC16A6NMB1 481 aa18.91■□□□□ 0.62
SNRPA1-203ENST00000540017 LUC7L3O95232 432 aaKnown RBP18.91■□□□□ 0.62
SNRPA1-203ENST00000540017 F9P00740 461 aa18.91■□□□□ 0.62
SNRPA1-203ENST00000540017 KRT3P12035 628 aa18.91■□□□□ 0.62
SNRPA1-203ENST00000540017 RRM1P23921 792 aa18.91■□□□□ 0.62
SNRPA1-203ENST00000540017 IL12RB1P42701 662 aa18.91■□□□□ 0.62
SNRPA1-203ENST00000540017 ZBED6P86452 979 aa18.91■□□□□ 0.62
SNRPA1-203ENST00000540017 ENPP2Q13822 863 aa18.91■□□□□ 0.62
SNRPA1-203ENST00000540017 ZNF234Q14588 700 aa18.91■□□□□ 0.62
SNRPA1-203ENST00000540017 LPAL2Q16609 132 aa18.91■□□□□ 0.62
SNRPA1-203ENST00000540017 FUT11Q495W5 492 aa18.91■□□□□ 0.62
SNRPA1-203ENST00000540017 PPP1R15BQ5SWA1 713 aa18.91■□□□□ 0.62
SNRPA1-203ENST00000540017 WDR59Q6PJI9 974 aa18.91■□□□□ 0.62
SNRPA1-203ENST00000540017 FAM131BQ86XD5 332 aa18.91■□□□□ 0.62
SNRPA1-203ENST00000540017 ZNF683Q8IZ20 524 aa18.91■□□□□ 0.62
SNRPA1-203ENST00000540017 CYB5D2Q8WUJ1 264 aa18.91■□□□□ 0.62
SNRPA1-203ENST00000540017 SELENOOQ9BVL4 669 aa18.91■□□□□ 0.62
SNRPA1-203ENST00000540017 VANGL2Q9ULK5 521 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms