RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 SRBD1Q8N5C6 995 aaKnown RBP6.47□□□□□ -1.37
MRE11-209ENST00000540013 USP38Q8NB14 1042 aa6.47□□□□□ -1.37
MRE11-209ENST00000540013 OR1N1Q8NGS0 311 aa6.47□□□□□ -1.37
MRE11-209ENST00000540013 GDAP1Q8TB36 358 aa6.47□□□□□ -1.37
MRE11-209ENST00000540013 STON2Q8WXE9 905 aa6.47□□□□□ -1.37
MRE11-209ENST00000540013 DVL3Q92997 716 aaPredicted RBP6.47□□□□□ -1.37
MRE11-209ENST00000540013 CUL5Q93034 780 aa6.47□□□□□ -1.37
MRE11-209ENST00000540013 TMEM176AQ96HP8 235 aa6.47□□□□□ -1.37
MRE11-209ENST00000540013 EPC1Q9H2F5 836 aa6.47□□□□□ -1.37
MRE11-209ENST00000540013 BCO1Q9HAY6 547 aa6.47□□□□□ -1.37
MRE11-209ENST00000540013 HPF1Q9NWY4 346 aa6.47□□□□□ -1.37
MRE11-209ENST00000540013 GPRC5DQ9NZD1 345 aa6.47□□□□□ -1.37
MRE11-209ENST00000540013 CALCOCO1Q9P1Z2 691 aa6.47□□□□□ -1.37
MRE11-209ENST00000540013 POLKQ9UBT6 870 aa6.47□□□□□ -1.37
MRE11-209ENST00000540013 IKBKGQ9Y6K9 419 aa6.47□□□□□ -1.37
MRE11-209ENST00000540013 TAF1LQ8IZX4 1826 aa6.47□□□□□ -1.37
MRE11-209ENST00000540013 TOGARAM1Q9Y4F4 1720 aa6.47□□□□□ -1.37
MRE11-209ENST00000540013 ITGA10O75578 1167 aa6.46□□□□□ -1.38
MRE11-209ENST00000540013 SLC22A3O75751 556 aa6.46□□□□□ -1.38
MRE11-209ENST00000540013 GNAT2P19087 354 aa6.46□□□□□ -1.38
MRE11-209ENST00000540013 TNNT2P45379 298 aaPredicted RBP6.46□□□□□ -1.38
MRE11-209ENST00000540013 CTCFP49711 727 aaPredicted RBP6.46□□□□□ -1.38
MRE11-209ENST00000540013 MCM2P49736 904 aa6.46□□□□□ -1.38
MRE11-209ENST00000540013 FOXL1Q12952 345 aa6.46□□□□□ -1.38
MRE11-209ENST00000540013 PRPF4BQ13523 1007 aaKnown RBP6.46□□□□□ -1.38
MRE11-209ENST00000540013 ACAP1Q15027 740 aa6.46□□□□□ -1.38
MRE11-209ENST00000540013 TBCEQ15813 527 aaPredicted RBP6.46□□□□□ -1.38
MRE11-209ENST00000540013 TRIM71Q2Q1W2 868 aaKnown RBP6.46□□□□□ -1.38
MRE11-209ENST00000540013 SLC44A4Q53GD3 710 aa6.46□□□□□ -1.38
MRE11-209ENST00000540013 NAA35Q5VZE5 725 aa6.46□□□□□ -1.38
MRE11-209ENST00000540013 RRAGBQ5VZM2 374 aa6.46□□□□□ -1.38
MRE11-209ENST00000540013 KLHL24Q6TFL4 600 aa6.46□□□□□ -1.38
MRE11-209ENST00000540013 ABHD15Q6UXT9 468 aa6.46□□□□□ -1.38
MRE11-209ENST00000540013 CCDC73Q6ZRK6 1079 aa6.46□□□□□ -1.38
MRE11-209ENST00000540013 USP51Q70EK9 711 aa6.46□□□□□ -1.38
MRE11-209ENST00000540013 SLC9B2Q86UD5 537 aa6.46□□□□□ -1.38
MRE11-209ENST00000540013 SGMS1Q86VZ5 419 aa6.46□□□□□ -1.38
MRE11-209ENST00000540013 MICU3Q86XE3 530 aa6.46□□□□□ -1.38
MRE11-209ENST00000540013 THNSL1Q8IYQ7 743 aa6.46□□□□□ -1.38
MRE11-209ENST00000540013 TAGAPQ8N103 731 aa6.46□□□□□ -1.38
MRE11-209ENST00000540013 LRRC71Q8N4P6 559 aa6.46□□□□□ -1.38
MRE11-209ENST00000540013 TTC39CQ8N584 583 aa6.46□□□□□ -1.38
MRE11-209ENST00000540013 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.46□□□□□ -1.38
MRE11-209ENST00000540013 SPC24Q8NBT2 197 aa6.46□□□□□ -1.38
MRE11-209ENST00000540013 SCAMP5Q8TAC9 235 aa6.46□□□□□ -1.38
MRE11-209ENST00000540013 USP6NLQ92738 828 aa6.46□□□□□ -1.38
MRE11-209ENST00000540013 MIEF2Q96C03 454 aa6.46□□□□□ -1.38
MRE11-209ENST00000540013 C8orf49Q96NF6 230 aa6.46□□□□□ -1.38
MRE11-209ENST00000540013 VRK1Q99986 396 aaPredicted RBP6.46□□□□□ -1.38
MRE11-209ENST00000540013 C1QTNF3Q9BXJ4 246 aa6.46□□□□□ -1.38
MRE11-209ENST00000540013 SMURF2Q9HAU4 748 aa6.46□□□□□ -1.38
MRE11-209ENST00000540013 RXFP3Q9NSD7 469 aa6.46□□□□□ -1.38
MRE11-209ENST00000540013 AURKAIP1Q9NWT8 199 aaPredicted RBP6.46□□□□□ -1.38
MRE11-209ENST00000540013 ZNF212Q9UDV6 495 aa6.46□□□□□ -1.38
MRE11-209ENST00000540013 ST6GALNAC2Q9UJ37 374 aa6.46□□□□□ -1.38
MRE11-209ENST00000540013 ZNF215Q9UL58 517 aaPredicted RBP6.46□□□□□ -1.38
MRE11-209ENST00000540013 PCDHA1Q9Y5I3 950 aa6.46□□□□□ -1.38
MRE11-209ENST00000540013 PIAS3Q9Y6X2 628 aa6.46□□□□□ -1.38
MRE11-209ENST00000540013 KIF7Q2M1P5 1343 aa6.46□□□□□ -1.38
MRE11-209ENST00000540013 CCDC69A6NI79 296 aa6.45□□□□□ -1.38
MRE11-209ENST00000540013 MPHOSPH10O00566 681 aaKnown RBP6.45□□□□□ -1.38
MRE11-209ENST00000540013 SH2B2O14492 632 aaPredicted RBP6.45□□□□□ -1.38
MRE11-209ENST00000540013 MUSKO15146 869 aa6.45□□□□□ -1.38
MRE11-209ENST00000540013 VILLO15195 856 aa6.45□□□□□ -1.38
MRE11-209ENST00000540013 KCNQ3O43525 872 aa6.45□□□□□ -1.38
MRE11-209ENST00000540013 KRT10P13645 584 aa6.45□□□□□ -1.38
MRE11-209ENST00000540013 IL1R1P14778 569 aa6.45□□□□□ -1.38
MRE11-209ENST00000540013 MALP21145 153 aa6.45□□□□□ -1.38
MRE11-209ENST00000540013 ACO1P21399 889 aaKnown RBP6.45□□□□□ -1.38
MRE11-209ENST00000540013 CASRP41180 1078 aa6.45□□□□□ -1.38
MRE11-209ENST00000540013 DPP6P42658 865 aa6.45□□□□□ -1.38
MRE11-209ENST00000540013 RAD23AP54725 363 aa6.45□□□□□ -1.38
MRE11-209ENST00000540013 PER3P56645 1201 aa6.45□□□□□ -1.38
MRE11-209ENST00000540013 UBXN2AP68543 259 aa6.45□□□□□ -1.38
MRE11-209ENST00000540013 COG2Q14746 738 aa6.45□□□□□ -1.38
MRE11-209ENST00000540013 PRKD1Q15139 912 aaPredicted RBP6.45□□□□□ -1.38
MRE11-209ENST00000540013 NOMO1Q15155 1222 aa6.45□□□□□ -1.38
MRE11-209ENST00000540013 GPR68Q15743 365 aa6.45□□□□□ -1.38
MRE11-209ENST00000540013 ADIPOQQ15848 244 aa6.45□□□□□ -1.38
MRE11-209ENST00000540013 MAPKAPK3Q16644 382 aa6.45□□□□□ -1.38
MRE11-209ENST00000540013 KYNUQ16719 465 aa6.45□□□□□ -1.38
MRE11-209ENST00000540013 ATPAF1Q5TC12 328 aaPredicted RBP6.45□□□□□ -1.38
MRE11-209ENST00000540013 EMC10Q5UCC4 262 aa6.45□□□□□ -1.38
MRE11-209ENST00000540013 USP17L6PQ6QN14 398 aa6.45□□□□□ -1.38
MRE11-209ENST00000540013 MAMDC4Q6UXC1 1216 aa6.45□□□□□ -1.38
MRE11-209ENST00000540013 H1FNTQ75WM6 255 aaPredicted RBP6.45□□□□□ -1.38
MRE11-209ENST00000540013 PRRT2Q7Z6L0 340 aaPredicted RBP6.45□□□□□ -1.38
MRE11-209ENST00000540013 ZFPM1Q8IX07 1006 aa6.45□□□□□ -1.38
MRE11-209ENST00000540013 OR7D4Q8NG98 312 aa6.45□□□□□ -1.38
MRE11-209ENST00000540013 MOSPD2Q8NHP6 518 aa6.45□□□□□ -1.38
MRE11-209ENST00000540013 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.45□□□□□ -1.38
MRE11-209ENST00000540013 RSC1A1Q92681 617 aa6.45□□□□□ -1.38
MRE11-209ENST00000540013 TAF4BQ92750 862 aa6.45□□□□□ -1.38
MRE11-209ENST00000540013 CYFIP2Q96F07 1278 aa6.45□□□□□ -1.38
MRE11-209ENST00000540013 ZNF512Q96ME7 567 aaPredicted RBP6.45□□□□□ -1.38
MRE11-209ENST00000540013 CCDC43Q96MW1 224 aaKnown RBP6.45□□□□□ -1.38
MRE11-209ENST00000540013 UHRF1Q96T88 793 aaPredicted RBP6.45□□□□□ -1.38
MRE11-209ENST00000540013 ANP32EQ9BTT0 268 aa6.45□□□□□ -1.38
MRE11-209ENST00000540013 ZNF518BQ9C0D4 1074 aa6.45□□□□□ -1.38
MRE11-209ENST00000540013 KLC2Q9H0B6 622 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms