RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 CREMQ03060 361 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 UBE3AQ05086 875 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 DDR2Q16832 855 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 SLC30A10Q6XR72 485 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 TMEM132CQ8N3T6 1108 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 CCDC3Q9BQI4 270 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 SHCBP1LQ9BZQ2 653 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 DPY30Q9C005 99 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 RAD18Q9NS91 495 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 GPATCH2LQ9NWQ4 482 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 CPA4Q9UI42 421 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 SERPINE1P05121 402 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 YBX3P16989 372 aaKnown RBP eCLIP6.63□□□□□ -1.35
LSAMP-207ENST00000539563 YWHAZP63104 245 aaKnown RBP6.63□□□□□ -1.35
LSAMP-207ENST00000539563 LYPLAL1Q5VWZ2 237 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 B3GALNT2Q8NCR0 500 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 OR56A4Q8NGH8 313 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 FAM120BQ96EK7 910 aaKnown RBP6.63□□□□□ -1.35
LSAMP-207ENST00000539563 MED8Q96G25 268 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 UGT2B28Q9BY64 529 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 IL22Q9GZX6 179 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 L1RE1Q9UN81 338 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 SATB2Q9UPW6 733 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 SNCAIPQ9Y6H5 919 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 MYH3P11055 1940 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 FAM220BPB1ANY3 271 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 FGF10O15520 208 aaPredicted RBP6.63□□□□□ -1.35
LSAMP-207ENST00000539563 STAU1O95793 577 aaKnown RBP6.63□□□□□ -1.35
LSAMP-207ENST00000539563 HPCAL1P37235 193 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 INHBEP58166 350 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 ARHGAP17Q68EM7 881 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 FAM45BPQ6NSW5 357 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 FBXO39Q8N4B4 442 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 MTERF3Q96E29 417 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 FUCA2Q9BTY2 467 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 PAPOLBQ9NRJ5 636 aaKnown RBP6.63□□□□□ -1.35
LSAMP-207ENST00000539563 SPG21Q9NZD8 308 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 PNMA8BQ9ULN7 279 aaPredicted RBP6.63□□□□□ -1.35
LSAMP-207ENST00000539563 NRCAMQ92823 1304 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 hCG_2014768A0A024R1R8 64 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 SNUPNO95149 360 aaKnown RBP6.62□□□□□ -1.35
LSAMP-207ENST00000539563 PCDH8O95206 1070 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 MYL4P12829 197 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 MAGEA10P43363 369 aaPredicted RBP6.62□□□□□ -1.35
LSAMP-207ENST00000539563 ERVK-9P63128 1117 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 SGCGQ13326 291 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 USP39Q53GS9 565 aaKnown RBP6.62□□□□□ -1.35
LSAMP-207ENST00000539563 WASHC2DQ5SRD0 308 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 USP45Q70EL2 814 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 FGD2Q7Z6J4 655 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 TMPRSS6Q8IU80 811 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 SLC44A2Q8IWA5 706 aaPredicted RBP6.62□□□□□ -1.35
LSAMP-207ENST00000539563 SVOPQ8N4V2 548 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 KYQ8NBH2 561 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 MAGEB10Q96LZ2 347 aaPredicted RBP6.62□□□□□ -1.35
LSAMP-207ENST00000539563 TBKBP1A7MCY6 615 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 UBDO15205 165 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 GSTM1P09488 218 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 SCNN1BP51168 640 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 PSMD7P51665 324 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 BCL2L1Q07817 233 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 NFIL3Q16649 462 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 FAM171A1Q5VUB5 890 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 TMEM26Q6ZUK4 368 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 KATNAL2Q8IYT4 538 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 MIER2Q8N344 545 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 EMC1Q8N766 993 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 ATG16L2Q8NAA4 619 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 MKL1Q969V6 931 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 DEPDC7Q96QD5 511 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 BBS2Q9BXC9 721 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 HMX1Q9NP08 348 aaPredicted RBP6.62□□□□□ -1.35
LSAMP-207ENST00000539563 TCF7L2Q9NQB0 619 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 MYH7P12883 1935 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 E9PBE3 544 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 H3BMM5 538 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 CYP1A1P04798 512 aaPredicted RBP6.62□□□□□ -1.35
LSAMP-207ENST00000539563 SLC2A4P14672 509 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 MGAT1P26572 445 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 CXCL9Q07325 125 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 STARD3Q14849 445 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 PARP6Q2NL67 630 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 TMC7Q7Z402 723 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 RIOX2Q8IUF8 465 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 APOPT1Q96IL0 206 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 NFASCO94856 1347 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 MYH10P35580 1976 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 SIGLEC16A6NMB1 481 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 RGS5O15539 181 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 XYLBO75191 536 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 GUCY1B2O75343 617 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 CNPP09543 421 aaKnown RBP6.62□□□□□ -1.35
LSAMP-207ENST00000539563 BGNP21810 368 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 PSMC6P62333 389 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 GNA13Q14344 377 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 C2CD6Q53TS8 623 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 TLK2Q86UE8 772 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 GPC2Q8N158 579 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 DDHD1Q8NEL9 900 aa6.62□□□□□ -1.35
LSAMP-207ENST00000539563 WDR48Q8TAF3 677 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms