RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 STILQ15468 1287 aa20.86■□□□□ 0.93
TMEM260-203ENST00000539559 LBX2Q6XYB7 198 aa20.86■□□□□ 0.93
TMEM260-203ENST00000539559 TSHZ1Q6ZSZ6 1077 aa20.86■□□□□ 0.93
TMEM260-203ENST00000539559 ILDR2Q71H61 639 aa20.86■□□□□ 0.93
TMEM260-203ENST00000539559 MAPK15Q8TD08 544 aa20.86■□□□□ 0.93
TMEM260-203ENST00000539559 ACTRT2Q8TDY3 377 aa20.86■□□□□ 0.93
TMEM260-203ENST00000539559 PPP4R1Q8TF05 950 aa20.86■□□□□ 0.93
TMEM260-203ENST00000539559 HPDLQ96IR7 371 aa20.86■□□□□ 0.93
TMEM260-203ENST00000539559 DNAJC1Q96KC8 554 aaKnown RBP20.86■□□□□ 0.93
TMEM260-203ENST00000539559 FRMD8Q9BZ67 464 aaPredicted RBP20.86■□□□□ 0.93
TMEM260-203ENST00000539559 RNF19AQ9NV58 838 aa20.86■□□□□ 0.93
TMEM260-203ENST00000539559 SERPINE1P05121 402 aa20.85■□□□□ 0.93
TMEM260-203ENST00000539559 PYGLP06737 847 aa20.85■□□□□ 0.93
TMEM260-203ENST00000539559 VDRP11473 427 aa20.85■□□□□ 0.93
TMEM260-203ENST00000539559 VAV1P15498 845 aa20.85■□□□□ 0.93
TMEM260-203ENST00000539559 SDC4P31431 198 aa20.85■□□□□ 0.93
TMEM260-203ENST00000539559 MAGEA6P43360 314 aa20.85■□□□□ 0.93
TMEM260-203ENST00000539559 FOLH1Q04609 750 aa20.85■□□□□ 0.93
TMEM260-203ENST00000539559 SLC9B1Q4ZJI4 515 aa20.85■□□□□ 0.93
TMEM260-203ENST00000539559 BOLA3Q53S33 107 aa20.85■□□□□ 0.93
TMEM260-203ENST00000539559 PPP1R26Q5T8A7 1209 aaPredicted RBP20.85■□□□□ 0.93
TMEM260-203ENST00000539559 PLD6Q8N2A8 252 aaKnown RBP20.85■□□□□ 0.93
TMEM260-203ENST00000539559 ZNF781Q8N8C0 355 aa20.85■□□□□ 0.93
TMEM260-203ENST00000539559 KHSRPQ92945 711 aaKnown RBP eCLIP20.85■□□□□ 0.93
TMEM260-203ENST00000539559 LRRC39Q96DD0 335 aa20.85■□□□□ 0.93
TMEM260-203ENST00000539559 GBA2Q9HCG7 927 aaPredicted RBP20.85■□□□□ 0.93
TMEM260-203ENST00000539559 HCRTO43612 131 aa20.85■□□□□ 0.93
TMEM260-203ENST00000539559 GABBR2O75899 941 aa20.85■□□□□ 0.93
TMEM260-203ENST00000539559 STAG3L1P0CL83 205 aa20.85■□□□□ 0.93
TMEM260-203ENST00000539559 SERPINB5P36952 375 aa20.85■□□□□ 0.93
TMEM260-203ENST00000539559 PHKA2P46019 1235 aa20.85■□□□□ 0.93
TMEM260-203ENST00000539559 CDK18Q07002 472 aa20.85■□□□□ 0.93
TMEM260-203ENST00000539559 DYNC1I2Q13409 638 aaKnown RBP20.85■□□□□ 0.93
TMEM260-203ENST00000539559 GADL1Q6ZQY3 521 aa20.85■□□□□ 0.93
TMEM260-203ENST00000539559 ADGRG6Q86SQ4 1221 aa20.85■□□□□ 0.93
TMEM260-203ENST00000539559 SESTD1Q86VW0 696 aa20.85■□□□□ 0.93
TMEM260-203ENST00000539559 ARHGAP18Q8N392 663 aa20.85■□□□□ 0.93
TMEM260-203ENST00000539559 RNF148Q8N7C7 305 aa20.85■□□□□ 0.93
TMEM260-203ENST00000539559 ADAM32Q8TC27 787 aa20.85■□□□□ 0.93
TMEM260-203ENST00000539559 ELP3Q9H9T3 547 aa20.85■□□□□ 0.93
TMEM260-203ENST00000539559 ZDHHC7Q9NXF8 308 aa20.85■□□□□ 0.93
TMEM260-203ENST00000539559 ITGA11Q9UKX5 1188 aa20.85■□□□□ 0.93
TMEM260-203ENST00000539559 TBC1D30Q9Y2I9 924 aa20.85■□□□□ 0.93
TMEM260-203ENST00000539559 ACKR2O00590 384 aa20.84■□□□□ 0.93
TMEM260-203ENST00000539559 GLRA3O75311 464 aa20.84■□□□□ 0.93
TMEM260-203ENST00000539559 ARIH2O95376 493 aa20.84■□□□□ 0.93
TMEM260-203ENST00000539559 ITGA2BP08514 1039 aa20.84■□□□□ 0.93
TMEM260-203ENST00000539559 RALBP11234 206 aa20.84■□□□□ 0.93
TMEM260-203ENST00000539559 ICAM3P32942 547 aa20.84■□□□□ 0.93
TMEM260-203ENST00000539559 TLR1Q15399 786 aa20.84■□□□□ 0.93
TMEM260-203ENST00000539559 PPM1LQ5SGD2 360 aa20.84■□□□□ 0.93
TMEM260-203ENST00000539559 OLFML1Q6UWY5 402 aa20.84■□□□□ 0.93
TMEM260-203ENST00000539559 NAPRTQ6XQN6 538 aa20.84■□□□□ 0.93
TMEM260-203ENST00000539559 SPATA24Q86W54 205 aa20.84■□□□□ 0.93
TMEM260-203ENST00000539559 CXorf38Q8TB03 319 aa20.84■□□□□ 0.93
TMEM260-203ENST00000539559 NCSTNQ92542 709 aa20.84■□□□□ 0.93
TMEM260-203ENST00000539559 SEPT10Q9P0V9 454 aa20.84■□□□□ 0.93
TMEM260-203ENST00000539559 AK5Q9Y6K8 562 aa20.84■□□□□ 0.93
TMEM260-203ENST00000539559 WDR90Q96KV7 1748 aa20.84■□□□□ 0.93
TMEM260-203ENST00000539559 AIM2O14862 343 aa20.84■□□□□ 0.93
TMEM260-203ENST00000539559 IRF6O14896 467 aa20.84■□□□□ 0.93
TMEM260-203ENST00000539559 DGKIO75912 1065 aa20.84■□□□□ 0.93
TMEM260-203ENST00000539559 TYK2P29597 1187 aa20.84■□□□□ 0.93
TMEM260-203ENST00000539559 RANBP1P43487 201 aa20.84■□□□□ 0.93
TMEM260-203ENST00000539559 IGBP1P78318 339 aa20.84■□□□□ 0.93
TMEM260-203ENST00000539559 FAM160B1Q5W0V3 765 aa20.84■□□□□ 0.93
TMEM260-203ENST00000539559 PAOXQ6QHF9 649 aa20.84■□□□□ 0.93
TMEM260-203ENST00000539559 TIFABQ6ZNK6 161 aa20.84■□□□□ 0.93
TMEM260-203ENST00000539559 ACOT1Q86TX2 421 aa20.84■□□□□ 0.93
TMEM260-203ENST00000539559 CDKL3Q8IVW4 592 aaPredicted RBP20.84■□□□□ 0.93
TMEM260-203ENST00000539559 ANKRD13AQ8IZ07 590 aa20.84■□□□□ 0.93
TMEM260-203ENST00000539559 OTUD5Q96G74 571 aa20.84■□□□□ 0.93
TMEM260-203ENST00000539559 CXCL16Q9H2A7 254 aa20.84■□□□□ 0.93
TMEM260-203ENST00000539559 COG4Q9H9E3 785 aa20.84■□□□□ 0.93
TMEM260-203ENST00000539559 COPG2Q9UBF2 871 aa20.84■□□□□ 0.93
TMEM260-203ENST00000539559 C15orf38-AP3S2A0A0A6YYH1 394 aa20.83■□□□□ 0.93
TMEM260-203ENST00000539559 NEMP1O14524 444 aa20.83■□□□□ 0.93
TMEM260-203ENST00000539559 COX4I1P13073 169 aa20.83■□□□□ 0.93
TMEM260-203ENST00000539559 CCR10P46092 362 aa20.83■□□□□ 0.93
TMEM260-203ENST00000539559 ABCE1P61221 599 aaKnown RBP20.83■□□□□ 0.93
TMEM260-203ENST00000539559 NIPAL4Q0D2K0 466 aa20.83■□□□□ 0.93
TMEM260-203ENST00000539559 LSAMPQ13449 338 aa20.83■□□□□ 0.93
TMEM260-203ENST00000539559 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.83■□□□□ 0.93
TMEM260-203ENST00000539559 HEATR6Q6AI08 1181 aaKnown RBP20.83■□□□□ 0.93
TMEM260-203ENST00000539559 USP50Q70EL3 339 aaPredicted RBP20.83■□□□□ 0.93
TMEM260-203ENST00000539559 ARPINQ7Z6K5 226 aa20.83■□□□□ 0.93
TMEM260-203ENST00000539559 TTC30AQ86WT1 665 aa20.83■□□□□ 0.93
TMEM260-203ENST00000539559 ERO1BQ86YB8 467 aa20.83■□□□□ 0.93
TMEM260-203ENST00000539559 FBXW8Q8N3Y1 598 aa20.83■□□□□ 0.93
TMEM260-203ENST00000539559 DNERQ8NFT8 737 aa20.83■□□□□ 0.93
TMEM260-203ENST00000539559 SEPT1Q8WYJ6 367 aa20.83■□□□□ 0.93
TMEM260-203ENST00000539559 TMPRSS4Q9NRS4 437 aa20.83■□□□□ 0.93
TMEM260-203ENST00000539559 SORCS3Q9UPU3 1222 aa20.83■□□□□ 0.93
TMEM260-203ENST00000539559 DLG2Q15700 870 aa20.83■□□□□ 0.92
TMEM260-203ENST00000539559 UGT2A3Q6UWM9 527 aa20.83■□□□□ 0.92
TMEM260-203ENST00000539559 CCDC185Q8N715 623 aa20.83■□□□□ 0.92
TMEM260-203ENST00000539559 OR52B2Q96RD2 323 aa20.83■□□□□ 0.92
TMEM260-203ENST00000539559 VCX3BQ9H321 246 aa20.83■□□□□ 0.92
TMEM260-203ENST00000539559 CAB39LQ9H9S4 337 aa20.83■□□□□ 0.92
TMEM260-203ENST00000539559 VCX3AQ9NNX9 186 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms