RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 CD72P21854 359 aa13.45□□□□□ -0.26
CCDC42-202ENST00000539522 HOXD9P28356 352 aaPredicted RBP13.45□□□□□ -0.26
CCDC42-202ENST00000539522 GBP1P32455 592 aa13.45□□□□□ -0.26
CCDC42-202ENST00000539522 CTHP32929 405 aa13.45□□□□□ -0.26
CCDC42-202ENST00000539522 HARS2P49590 506 aaKnown RBP13.45□□□□□ -0.26
CCDC42-202ENST00000539522 MLLT6P55198 1093 aaPredicted RBP13.45□□□□□ -0.26
CCDC42-202ENST00000539522 RPS24P62847 133 aaKnown RBP13.45□□□□□ -0.26
CCDC42-202ENST00000539522 SCAPQ12770 1279 aa13.45□□□□□ -0.26
CCDC42-202ENST00000539522 AUHQ13825 339 aaKnown RBP13.45□□□□□ -0.26
CCDC42-202ENST00000539522 ITPRIPL2Q3MIP1 535 aa13.45□□□□□ -0.26
CCDC42-202ENST00000539522 FBXL22Q6P050 247 aa13.45□□□□□ -0.26
CCDC42-202ENST00000539522 CC2D1AQ6P1N0 951 aaPredicted RBP13.45□□□□□ -0.26
CCDC42-202ENST00000539522 CIR1Q86X95 450 aaPredicted RBP13.45□□□□□ -0.26
CCDC42-202ENST00000539522 UNC45BQ8IWX7 931 aa13.45□□□□□ -0.26
CCDC42-202ENST00000539522 UBALD2Q8IYN6 164 aa13.45□□□□□ -0.26
CCDC42-202ENST00000539522 CFAP52Q8N1V2 620 aa13.45□□□□□ -0.26
CCDC42-202ENST00000539522 OR52K2Q8NGK3 314 aa13.45□□□□□ -0.26
CCDC42-202ENST00000539522 ATP2A3Q93084 1043 aa13.45□□□□□ -0.26
CCDC42-202ENST00000539522 NTAN1Q96AB6 310 aa13.45□□□□□ -0.26
CCDC42-202ENST00000539522 C16orf45Q96MC5 204 aaPredicted RBP13.45□□□□□ -0.26
CCDC42-202ENST00000539522 WNT16Q9UBV4 365 aa13.45□□□□□ -0.26
CCDC42-202ENST00000539522 LSM7Q9UK45 103 aaKnown RBP13.45□□□□□ -0.26
CCDC42-202ENST00000539522 FBXO10Q9UK96 956 aa13.45□□□□□ -0.26
CCDC42-202ENST00000539522 GUCA1BQ9UMX6 200 aa13.45□□□□□ -0.26
CCDC42-202ENST00000539522 HYOU1Q9Y4L1 999 aa13.45□□□□□ -0.26
CCDC42-202ENST00000539522 PIAS3Q9Y6X2 628 aa13.45□□□□□ -0.26
CCDC42-202ENST00000539522 IGLV3-10A0A075B6K4 115 aa13.44□□□□□ -0.26
CCDC42-202ENST00000539522 A0A0A6YYK5 440 aaPredicted RBP13.44□□□□□ -0.26
CCDC42-202ENST00000539522 SLC9A3R1O14745 358 aaPredicted RBP13.44□□□□□ -0.26
CCDC42-202ENST00000539522 BUB1BO60566 1050 aaPredicted RBP13.44□□□□□ -0.26
CCDC42-202ENST00000539522 CNTN5O94779 1100 aa13.44□□□□□ -0.26
CCDC42-202ENST00000539522 NFATC1O95644 943 aa13.44□□□□□ -0.26
CCDC42-202ENST00000539522 APOEP02649 317 aa13.44□□□□□ -0.26
CCDC42-202ENST00000539522 ADH5P11766 374 aa13.44□□□□□ -0.26
CCDC42-202ENST00000539522 ARSEP51690 589 aa13.44□□□□□ -0.26
CCDC42-202ENST00000539522 GNG11P61952 73 aa13.44□□□□□ -0.26
CCDC42-202ENST00000539522 MLF2Q15773 248 aaPredicted RBP13.44□□□□□ -0.26
CCDC42-202ENST00000539522 ATP13A4Q4VNC1 1196 aa13.44□□□□□ -0.26
CCDC42-202ENST00000539522 ALFQ53S48 1182 aa13.44□□□□□ -0.26
CCDC42-202ENST00000539522 CWF19L1Q69YN2 538 aaKnown RBP13.44□□□□□ -0.26
CCDC42-202ENST00000539522 BHMTQ93088 406 aa13.44□□□□□ -0.26
CCDC42-202ENST00000539522 HAPLN3Q96S86 360 aa13.44□□□□□ -0.26
CCDC42-202ENST00000539522 SNRNP25Q9BV90 132 aaKnown RBP13.44□□□□□ -0.26
CCDC42-202ENST00000539522 ARHGEF3Q9NR81 526 aa13.44□□□□□ -0.26
CCDC42-202ENST00000539522 PCSK1NQ9UHG2 260 aa13.44□□□□□ -0.26
CCDC42-202ENST00000539522 IP6K2Q9UHH9 426 aa13.44□□□□□ -0.26
CCDC42-202ENST00000539522 ZNF510Q9Y2H8 683 aa13.44□□□□□ -0.26
CCDC42-202ENST00000539522 KMT2EQ8IZD2 1858 aa13.44□□□□□ -0.26
CCDC42-202ENST00000539522 DRGXA6NNA5 263 aa13.43□□□□□ -0.26
CCDC42-202ENST00000539522 NEDD8-MDP1E9PL57 170 aa13.43□□□□□ -0.26
CCDC42-202ENST00000539522 BUB1O43683 1085 aa13.43□□□□□ -0.26
CCDC42-202ENST00000539522 CACNG3O60359 315 aa13.43□□□□□ -0.26
CCDC42-202ENST00000539522 TYRP14679 529 aa13.43□□□□□ -0.26
CCDC42-202ENST00000539522 PCK1P35558 622 aa13.43□□□□□ -0.26
CCDC42-202ENST00000539522 SLC11A2P49281 568 aa13.43□□□□□ -0.26
CCDC42-202ENST00000539522 STARD6P59095 220 aa13.43□□□□□ -0.26
CCDC42-202ENST00000539522 SIGLEC14Q08ET2 396 aa13.43□□□□□ -0.26
CCDC42-202ENST00000539522 PIGHQ14442 188 aaPredicted RBP13.43□□□□□ -0.26
CCDC42-202ENST00000539522 MESDQ14696 234 aa13.43□□□□□ -0.26
CCDC42-202ENST00000539522 IFI16Q16666 785 aaKnown RBP13.43□□□□□ -0.26
CCDC42-202ENST00000539522 FSCBQ5H9T9 825 aa13.43□□□□□ -0.26
CCDC42-202ENST00000539522 FSTL4Q6MZW2 842 aa13.43□□□□□ -0.26
CCDC42-202ENST00000539522 TRIM67Q6ZTA4 783 aa13.43□□□□□ -0.26
CCDC42-202ENST00000539522 TPRG1Q6ZUI0 275 aa13.43□□□□□ -0.26
CCDC42-202ENST00000539522 ANKS1BQ7Z6G8 1248 aa13.43□□□□□ -0.26
CCDC42-202ENST00000539522 RHOT2Q8IXI1 618 aa13.43□□□□□ -0.26
CCDC42-202ENST00000539522 LGI2Q8N0V4 545 aa13.43□□□□□ -0.26
CCDC42-202ENST00000539522 SIX5Q8N196 739 aa13.43□□□□□ -0.26
CCDC42-202ENST00000539522 NAT16Q8N8M0 369 aa13.43□□□□□ -0.26
CCDC42-202ENST00000539522 ATP6V0D2Q8N8Y2 350 aa13.43□□□□□ -0.26
CCDC42-202ENST00000539522 LRRC57Q8N9N7 239 aa13.43□□□□□ -0.26
CCDC42-202ENST00000539522 TPCN2Q8NHX9 752 aa13.43□□□□□ -0.26
CCDC42-202ENST00000539522 KIF18AQ8NI77 898 aa13.43□□□□□ -0.26
CCDC42-202ENST00000539522 CALR3Q96L12 384 aaKnown RBP13.43□□□□□ -0.26
CCDC42-202ENST00000539522 C1orf74Q96LT6 269 aa13.43□□□□□ -0.26
CCDC42-202ENST00000539522 KCTD15Q96SI1 283 aaPredicted RBP13.43□□□□□ -0.26
CCDC42-202ENST00000539522 SIK2Q9H0K1 926 aa13.43□□□□□ -0.26
CCDC42-202ENST00000539522 OSBPL2Q9H1P3 480 aa13.43□□□□□ -0.26
CCDC42-202ENST00000539522 NDFIP2Q9NV92 336 aa13.43□□□□□ -0.26
CCDC42-202ENST00000539522 VANGL2Q9ULK5 521 aa13.43□□□□□ -0.26
CCDC42-202ENST00000539522 USP18Q9UMW8 372 aa13.43□□□□□ -0.26
CCDC42-202ENST00000539522 GRID2IPA4D2P6 1211 aa13.42□□□□□ -0.26
CCDC42-202ENST00000539522 TMEM110-MUSTN1A8MSY1 372 aa13.42□□□□□ -0.26
CCDC42-202ENST00000539522 E9PAM4 449 aa13.42□□□□□ -0.26
CCDC42-202ENST00000539522 MYO1FO00160 1098 aa13.42□□□□□ -0.26
CCDC42-202ENST00000539522 TNFRSF10AO00220 468 aa13.42□□□□□ -0.26
CCDC42-202ENST00000539522 TULP3O75386 442 aa13.42□□□□□ -0.26
CCDC42-202ENST00000539522 RARAP10276 462 aa13.42□□□□□ -0.26
CCDC42-202ENST00000539522 SLC2A3P11169 496 aa13.42□□□□□ -0.26
CCDC42-202ENST00000539522 GLULP15104 373 aa13.42□□□□□ -0.26
CCDC42-202ENST00000539522 IL4RP24394 825 aa13.42□□□□□ -0.26
CCDC42-202ENST00000539522 TARSP26639 723 aaKnown RBP13.42□□□□□ -0.26
CCDC42-202ENST00000539522 MAN1A1P33908 653 aa13.42□□□□□ -0.26
CCDC42-202ENST00000539522 CHKAP35790 457 aa13.42□□□□□ -0.26
CCDC42-202ENST00000539522 GALK1P51570 392 aa13.42□□□□□ -0.26
CCDC42-202ENST00000539522 PFKPQ01813 784 aa13.42□□□□□ -0.26
CCDC42-202ENST00000539522 NRG1Q02297 640 aaPredicted RBP13.42□□□□□ -0.26
CCDC42-202ENST00000539522 ACAP1Q15027 740 aa13.42□□□□□ -0.26
CCDC42-202ENST00000539522 SMTNL2Q2TAL5 461 aa13.42□□□□□ -0.26
CCDC42-202ENST00000539522 ANO4Q32M45 955 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms