RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, humanhuman

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-205ENST00000538828 HINFPQ9BQA5 517 aa12.75□□□□□ -0.37
CLTCL1-205ENST00000538828 DUSP15Q9H1R2 295 aaPredicted RBP12.75□□□□□ -0.37
CLTCL1-205ENST00000538828 RETREG1Q9H6L5 497 aa12.75□□□□□ -0.37
CLTCL1-205ENST00000538828 NLRC4Q9NPP4 1024 aa12.75□□□□□ -0.37
CLTCL1-205ENST00000538828 GGA2Q9UJY4 613 aa12.75□□□□□ -0.37
CLTCL1-205ENST00000538828 TMEM59LQ9UK28 342 aa12.75□□□□□ -0.37
CLTCL1-205ENST00000538828 PLA2G4CQ9UP65 541 aa12.75□□□□□ -0.37
CLTCL1-205ENST00000538828 STON1Q9Y6Q2 735 aa12.75□□□□□ -0.37
CLTCL1-205ENST00000538828 GON4LQ3T8J9 2241 aa12.74□□□□□ -0.37
CLTCL1-205ENST00000538828 TCRBV21S2A2A0A5A6 115 aa12.74□□□□□ -0.37
CLTCL1-205ENST00000538828 F5H5T6 163 aa12.74□□□□□ -0.37
CLTCL1-205ENST00000538828 TBL1XO60907 577 aa12.74□□□□□ -0.37
CLTCL1-205ENST00000538828 ENDOD1O94919 500 aa12.74□□□□□ -0.37
CLTCL1-205ENST00000538828 DLDP09622 509 aaKnown RBP12.74□□□□□ -0.37
CLTCL1-205ENST00000538828 ZNF806P0C7X5 589 aa12.74□□□□□ -0.37
CLTCL1-205ENST00000538828 GABRG2P18507 467 aa12.74□□□□□ -0.37
CLTCL1-205ENST00000538828 TACR2P21452 398 aa12.74□□□□□ -0.37
CLTCL1-205ENST00000538828 HOXD12P35452 270 aa12.74□□□□□ -0.37
CLTCL1-205ENST00000538828 PXNP49023 591 aaPredicted RBP12.74□□□□□ -0.37
CLTCL1-205ENST00000538828 KLK7P49862 253 aa12.74□□□□□ -0.37
CLTCL1-205ENST00000538828 PLK1P53350 603 aa12.74□□□□□ -0.37
CLTCL1-205ENST00000538828 SRSF5Q13243 272 aaKnown RBP12.74□□□□□ -0.37
CLTCL1-205ENST00000538828 ZNF234Q14588 700 aa12.74□□□□□ -0.37
CLTCL1-205ENST00000538828 MAP7D1Q3KQU3 841 aa12.74□□□□□ -0.37
CLTCL1-205ENST00000538828 RABGAP1LQ5R372 815 aa12.74□□□□□ -0.37
CLTCL1-205ENST00000538828 SND1Q7KZF4 910 aaKnown RBP eCLIP12.74□□□□□ -0.37
CLTCL1-205ENST00000538828 ADIPOR2Q86V24 386 aa12.74□□□□□ -0.37
CLTCL1-205ENST00000538828 KBTBD6Q86V97 674 aa12.74□□□□□ -0.37
CLTCL1-205ENST00000538828 PHF13Q86YI8 300 aaPredicted RBP12.74□□□□□ -0.37
CLTCL1-205ENST00000538828 MFN1Q8IWA4 741 aa12.74□□□□□ -0.37
CLTCL1-205ENST00000538828 VCPIP1Q96JH7 1222 aa12.74□□□□□ -0.37
CLTCL1-205ENST00000538828 PCMTD1Q96MG8 357 aaPredicted RBP12.74□□□□□ -0.37
CLTCL1-205ENST00000538828 PRICKLE1Q96MT3 831 aaPredicted RBP12.74□□□□□ -0.37
CLTCL1-205ENST00000538828 NUCKS1Q9H1E3 243 aaKnown RBP12.74□□□□□ -0.37
CLTCL1-205ENST00000538828 TMEM245Q9H330 911 aa12.74□□□□□ -0.37
CLTCL1-205ENST00000538828 FAM204AQ9H8W3 233 aa12.74□□□□□ -0.37
CLTCL1-205ENST00000538828 ARHGEF38Q9NXL2 777 aa12.74□□□□□ -0.37
CLTCL1-205ENST00000538828 KIAA1522Q9P206 1035 aaPredicted RBP12.74□□□□□ -0.37
CLTCL1-205ENST00000538828 CLEC4EQ9ULY5 219 aa12.74□□□□□ -0.37
CLTCL1-205ENST00000538828 CACNA1AO00555 2505 aa12.73□□□□□ -0.37
CLTCL1-205ENST00000538828 NUP205Q92621 2012 aa12.73□□□□□ -0.37
CLTCL1-205ENST00000538828 THADAQ6YHU6 1953 aa12.73□□□□□ -0.37
CLTCL1-205ENST00000538828 A0A1B0GVM2 712 aa12.73□□□□□ -0.37
CLTCL1-205ENST00000538828 ANTXRLA6NF34 631 aa12.73□□□□□ -0.37
CLTCL1-205ENST00000538828 TCAF2A6NFQ2 919 aa12.73□□□□□ -0.37
CLTCL1-205ENST00000538828 M0QYT0 321 aa12.73□□□□□ -0.37
CLTCL1-205ENST00000538828 TSPAN3O60637 253 aa12.73□□□□□ -0.37
CLTCL1-205ENST00000538828 LUC7L3O95232 432 aaKnown RBP12.73□□□□□ -0.37
CLTCL1-205ENST00000538828 MOCS3O95396 460 aa12.73□□□□□ -0.37
CLTCL1-205ENST00000538828 IGLV3-19P01714 112 aa12.73□□□□□ -0.37
CLTCL1-205ENST00000538828 CALB1P05937 261 aa12.73□□□□□ -0.37
CLTCL1-205ENST00000538828 SRPRAP08240 638 aaKnown RBP12.73□□□□□ -0.37
CLTCL1-205ENST00000538828 CHRNB2P17787 502 aa12.73□□□□□ -0.37
CLTCL1-205ENST00000538828 POLR2EP19388 210 aaKnown RBP12.73□□□□□ -0.37
CLTCL1-205ENST00000538828 PITX1P78337 314 aaPredicted RBP12.73□□□□□ -0.37
CLTCL1-205ENST00000538828 ARID5AQ03989 594 aa12.73□□□□□ -0.37
CLTCL1-205ENST00000538828 SULT2A1Q06520 285 aa12.73□□□□□ -0.37
CLTCL1-205ENST00000538828 CAMK2GQ13555 558 aaPredicted RBP12.73□□□□□ -0.37
CLTCL1-205ENST00000538828 CDH18Q13634 790 aa12.73□□□□□ -0.37
CLTCL1-205ENST00000538828 PLA2G2CQ5R387 149 aa12.73□□□□□ -0.37
CLTCL1-205ENST00000538828 FAM102AQ5T9C2 384 aaPredicted RBP12.73□□□□□ -0.37
CLTCL1-205ENST00000538828 TAF3Q5VWG9 929 aa12.73□□□□□ -0.37
CLTCL1-205ENST00000538828 NAA35Q5VZE5 725 aa12.73□□□□□ -0.37
CLTCL1-205ENST00000538828 TMEM215Q68D42 235 aa12.73□□□□□ -0.37
CLTCL1-205ENST00000538828 RFWD3Q6PCD5 774 aa12.73□□□□□ -0.37
CLTCL1-205ENST00000538828 CHST9Q7L1S5 443 aa12.73□□□□□ -0.37
CLTCL1-205ENST00000538828 CHSY1Q86X52 802 aa12.73□□□□□ -0.37
CLTCL1-205ENST00000538828 ADAM32Q8TC27 787 aa12.73□□□□□ -0.37
CLTCL1-205ENST00000538828 HAPLN3Q96S86 360 aa12.73□□□□□ -0.37
CLTCL1-205ENST00000538828 ACOX2Q99424 681 aa12.73□□□□□ -0.37
CLTCL1-205ENST00000538828 WDCPQ9H6R7 721 aa12.73□□□□□ -0.37
CLTCL1-205ENST00000538828 SEMA4GQ9NTN9 838 aa12.73□□□□□ -0.37
CLTCL1-205ENST00000538828 ABCB8Q9NUT2 735 aa12.73□□□□□ -0.37
CLTCL1-205ENST00000538828 POLR3BQ9NW08 1133 aaPredicted RBP12.73□□□□□ -0.37
CLTCL1-205ENST00000538828 AIPL1Q9NZN9 384 aa12.73□□□□□ -0.37
CLTCL1-205ENST00000538828 BCCIPQ9P287 314 aaKnown RBP eCLIP12.73□□□□□ -0.37
CLTCL1-205ENST00000538828 SUN2Q9UH99 717 aa12.73□□□□□ -0.37
CLTCL1-205ENST00000538828 DMXL1Q9Y485 3027 aa12.73□□□□□ -0.37
CLTCL1-205ENST00000538828 CXorf51AA0A1B0GTR3 108 aa12.72□□□□□ -0.37
CLTCL1-205ENST00000538828 GOLGA6L7A0A1B0GV03 622 aa12.72□□□□□ -0.37
CLTCL1-205ENST00000538828 BCLAF3A2AJT9 711 aaKnown RBP12.72□□□□□ -0.37
CLTCL1-205ENST00000538828 SYNCRIPO60506 623 aaKnown RBP12.72□□□□□ -0.37
CLTCL1-205ENST00000538828 NDUFV2P19404 249 aa12.72□□□□□ -0.37
CLTCL1-205ENST00000538828 HOXC13P31276 330 aa12.72□□□□□ -0.37
CLTCL1-205ENST00000538828 PRKCIP41743 596 aa12.72□□□□□ -0.37
CLTCL1-205ENST00000538828 PI4KAP42356 2102 aa12.72□□□□□ -0.37
CLTCL1-205ENST00000538828 IL12RB1P42701 662 aa12.72□□□□□ -0.37
CLTCL1-205ENST00000538828 NSFP46459 744 aaKnown RBP12.72□□□□□ -0.37
CLTCL1-205ENST00000538828 LIMK1P53667 647 aa12.72□□□□□ -0.37
CLTCL1-205ENST00000538828 RPS24P62847 133 aaKnown RBP12.72□□□□□ -0.37
CLTCL1-205ENST00000538828 ZBTB16Q05516 673 aa12.72□□□□□ -0.37
CLTCL1-205ENST00000538828 C1QBPQ07021 282 aaKnown RBP12.72□□□□□ -0.37
CLTCL1-205ENST00000538828 NR1I3Q14994 352 aa12.72□□□□□ -0.37
CLTCL1-205ENST00000538828 CLEC16AQ2KHT3 1053 aa12.72□□□□□ -0.37
CLTCL1-205ENST00000538828 MBLAC2Q68D91 279 aa12.72□□□□□ -0.37
CLTCL1-205ENST00000538828 SERPINA13PQ6UXR4 307 aa12.72□□□□□ -0.37
CLTCL1-205ENST00000538828 LPCAT2Q7L5N7 544 aa12.72□□□□□ -0.37
CLTCL1-205ENST00000538828 IRF2BP2Q7Z5L9 587 aa12.72□□□□□ -0.37
CLTCL1-205ENST00000538828 LGI2Q8N0V4 545 aa12.72□□□□□ -0.37
CLTCL1-205ENST00000538828 DCLK2Q8N568 766 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms