RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 DENND1CQ8IV53 801 aa17.82■□□□□ 0.44
CLN6-202ENST00000538696 ADHFE1Q8IWW8 467 aa17.82■□□□□ 0.44
CLN6-202ENST00000538696 UNC45BQ8IWX7 931 aa17.82■□□□□ 0.44
CLN6-202ENST00000538696 BBS7Q8IWZ6 715 aa17.82■□□□□ 0.44
CLN6-202ENST00000538696 ATP6V0D2Q8N8Y2 350 aa17.82■□□□□ 0.44
CLN6-202ENST00000538696 RSAD2Q8WXG1 361 aa17.82■□□□□ 0.44
CLN6-202ENST00000538696 RAPGEF5Q92565 580 aa17.82■□□□□ 0.44
CLN6-202ENST00000538696 NTAN1Q96AB6 310 aa17.82■□□□□ 0.44
CLN6-202ENST00000538696 RNF25Q96BH1 459 aaPredicted RBP17.82■□□□□ 0.44
CLN6-202ENST00000538696 DCLK3Q9C098 648 aa17.82■□□□□ 0.44
CLN6-202ENST00000538696 TKTL2Q9H0I9 626 aa17.82■□□□□ 0.44
CLN6-202ENST00000538696 WDCPQ9H6R7 721 aa17.82■□□□□ 0.44
CLN6-202ENST00000538696 ANKZF1Q9H8Y5 726 aa17.82■□□□□ 0.44
CLN6-202ENST00000538696 TMEM51Q9NW97 253 aa17.82■□□□□ 0.44
CLN6-202ENST00000538696 DDX56Q9NY93 547 aaKnown RBP17.82■□□□□ 0.44
CLN6-202ENST00000538696 PRKAG3Q9UGI9 489 aa17.82■□□□□ 0.44
CLN6-202ENST00000538696 AGO1Q9UL18 857 aaKnown RBP17.82■□□□□ 0.44
CLN6-202ENST00000538696 ZRANB2O95218 330 aaKnown RBP eCLIP17.81■□□□□ 0.44
CLN6-202ENST00000538696 LATS1O95835 1130 aa17.81■□□□□ 0.44
CLN6-202ENST00000538696 BMP1P13497 986 aa17.81■□□□□ 0.44
CLN6-202ENST00000538696 MRPS25P82663 173 aaKnown RBP17.81■□□□□ 0.44
CLN6-202ENST00000538696 GRM2Q14416 872 aa17.81■□□□□ 0.44
CLN6-202ENST00000538696 SIX1Q15475 284 aaPredicted RBP17.81■□□□□ 0.44
CLN6-202ENST00000538696 ZFYVE27Q5T4F4 411 aa17.81■□□□□ 0.44
CLN6-202ENST00000538696 NADSYN1Q6IA69 706 aa17.81■□□□□ 0.44
CLN6-202ENST00000538696 MFSD7Q6UXD7 560 aa17.81■□□□□ 0.44
CLN6-202ENST00000538696 CCDC50Q8IVM0 306 aa17.81■□□□□ 0.44
CLN6-202ENST00000538696 MFSD6LQ8IWD5 586 aa17.81■□□□□ 0.44
CLN6-202ENST00000538696 KLHL7Q8IXQ5 586 aa17.81■□□□□ 0.44
CLN6-202ENST00000538696 DEPDC1BQ8WUY9 529 aa17.81■□□□□ 0.44
CLN6-202ENST00000538696 ASIC4Q96FT7 647 aa17.81■□□□□ 0.44
CLN6-202ENST00000538696 ASB2Q96Q27 587 aa17.81■□□□□ 0.44
CLN6-202ENST00000538696 KRT12Q99456 494 aa17.81■□□□□ 0.44
CLN6-202ENST00000538696 NAP1L3Q99457 506 aaPredicted RBP17.81■□□□□ 0.44
CLN6-202ENST00000538696 NCAPGQ9BPX3 1015 aa17.81■□□□□ 0.44
CLN6-202ENST00000538696 LIMD1Q9UGP4 676 aa17.81■□□□□ 0.44
CLN6-202ENST00000538696 USP18Q9UMW8 372 aa17.81■□□□□ 0.44
CLN6-202ENST00000538696 WNT6Q9Y6F9 365 aa17.81■□□□□ 0.44
CLN6-202ENST00000538696 DOCK4Q8N1I0 1966 aa17.81■□□□□ 0.44
CLN6-202ENST00000538696 COL6A3P12111 3177 aa17.81■□□□□ 0.44
CLN6-202ENST00000538696 LRRD1A4D1F6 860 aa17.8■□□□□ 0.44
CLN6-202ENST00000538696 ACSL4O60488 711 aa17.8■□□□□ 0.44
CLN6-202ENST00000538696 PAGE1O75459 146 aa17.8■□□□□ 0.44
CLN6-202ENST00000538696 KRT7P08729 469 aa17.8■□□□□ 0.44
CLN6-202ENST00000538696 ADRA1BP35368 520 aa17.8■□□□□ 0.44
CLN6-202ENST00000538696 GGCXP38435 758 aa17.8■□□□□ 0.44
CLN6-202ENST00000538696 TUBB4BP68371 445 aa17.8■□□□□ 0.44
CLN6-202ENST00000538696 FCHO2Q0JRZ9 810 aa17.8■□□□□ 0.44
CLN6-202ENST00000538696 SCAPQ12770 1279 aa17.8■□□□□ 0.44
CLN6-202ENST00000538696 KCNT1Q5JUK3 1230 aa17.8■□□□□ 0.44
CLN6-202ENST00000538696 PIK3R6Q5UE93 754 aa17.8■□□□□ 0.44
CLN6-202ENST00000538696 SPOCD1Q6ZMY3 1216 aa17.8■□□□□ 0.44
CLN6-202ENST00000538696 FAM217AQ8IXS0 508 aa17.8■□□□□ 0.44
CLN6-202ENST00000538696 RCOR2Q8IZ40 523 aa17.8■□□□□ 0.44
CLN6-202ENST00000538696 GPR161Q8N6U8 529 aaKnown RBP17.8■□□□□ 0.44
CLN6-202ENST00000538696 KIAA1958Q8N8K9 716 aa17.8■□□□□ 0.44
CLN6-202ENST00000538696 AZIN2Q96A70 460 aa17.8■□□□□ 0.44
CLN6-202ENST00000538696 RBM41Q96IZ5 413 aaKnown RBP17.8■□□□□ 0.44
CLN6-202ENST00000538696 BTN2A3PQ96KV6 586 aa17.8■□□□□ 0.44
CLN6-202ENST00000538696 SNRNP25Q9BV90 132 aaKnown RBP17.8■□□□□ 0.44
CLN6-202ENST00000538696 OSBPL8Q9BZF1 889 aa17.8■□□□□ 0.44
CLN6-202ENST00000538696 DDX47Q9H0S4 455 aaKnown RBP17.8■□□□□ 0.44
CLN6-202ENST00000538696 KCNK12Q9HB15 430 aa17.8■□□□□ 0.44
CLN6-202ENST00000538696 GPATCH2LQ9NWQ4 482 aa17.8■□□□□ 0.44
CLN6-202ENST00000538696 STOML2Q9UJZ1 356 aa17.8■□□□□ 0.44
CLN6-202ENST00000538696 FZD10Q9ULW2 581 aa17.8■□□□□ 0.44
CLN6-202ENST00000538696 ZNF510Q9Y2H8 683 aa17.8■□□□□ 0.44
CLN6-202ENST00000538696 SNX10Q9Y5X0 201 aa17.8■□□□□ 0.44
CLN6-202ENST00000538696 MIA3Q5JRA6 1907 aa17.79■□□□□ 0.44
CLN6-202ENST00000538696 GOLGA6L7A0A1B0GV03 622 aa17.79■□□□□ 0.44
CLN6-202ENST00000538696 CCDC188H7C350 402 aa17.79■□□□□ 0.44
CLN6-202ENST00000538696 PRPSAP2O60256 369 aa17.79■□□□□ 0.44
CLN6-202ENST00000538696 ASGR2P07307 311 aa17.79■□□□□ 0.44
CLN6-202ENST00000538696 RARAP10276 462 aa17.79■□□□□ 0.44
CLN6-202ENST00000538696 PSMC3P17980 439 aa17.79■□□□□ 0.44
CLN6-202ENST00000538696 SLC6A4P31645 630 aa17.79■□□□□ 0.44
CLN6-202ENST00000538696 SLC11A2P49281 568 aa17.79■□□□□ 0.44
CLN6-202ENST00000538696 ARL13BQ3SXY8 428 aa17.79■□□□□ 0.44
CLN6-202ENST00000538696 FAM133BQ5BKY9 247 aaKnown RBP17.79■□□□□ 0.44
CLN6-202ENST00000538696 MS4A13Q5J8X5 152 aa17.79■□□□□ 0.44
CLN6-202ENST00000538696 PRELID2Q8N945 189 aa17.79■□□□□ 0.44
CLN6-202ENST00000538696 OSCP1Q8WVF1 389 aa17.79■□□□□ 0.44
CLN6-202ENST00000538696 HSPH1Q92598 858 aa17.79■□□□□ 0.44
CLN6-202ENST00000538696 ZFYVE19Q96K21 471 aa17.79■□□□□ 0.44
CLN6-202ENST00000538696 PNKPQ96T60 521 aa17.79■□□□□ 0.44
CLN6-202ENST00000538696 LRRC1Q9BTT6 524 aa17.79■□□□□ 0.44
CLN6-202ENST00000538696 HEMGNQ9BXL5 484 aa17.79■□□□□ 0.44
CLN6-202ENST00000538696 MAGEB5Q9BZ81 275 aa17.79■□□□□ 0.44
CLN6-202ENST00000538696 IGSF9Q9P2J2 1179 aa17.79■□□□□ 0.44
CLN6-202ENST00000538696 SLC12A6Q9UHW9 1150 aa17.79■□□□□ 0.44
CLN6-202ENST00000538696 HS3ST4Q9Y661 456 aa17.79■□□□□ 0.44
CLN6-202ENST00000538696 GOLGA6L10A0A0M3HER8 536 aa17.78■□□□□ 0.44
CLN6-202ENST00000538696 C19orf67A6NJJ6 358 aa17.78■□□□□ 0.44
CLN6-202ENST00000538696 C3orf70A6NLC5 250 aaPredicted RBP17.78■□□□□ 0.44
CLN6-202ENST00000538696 PTPN7P35236 360 aa17.78■□□□□ 0.44
CLN6-202ENST00000538696 IFNAR2P48551 515 aa17.78■□□□□ 0.44
CLN6-202ENST00000538696 AIF1P55008 147 aa17.78■□□□□ 0.44
CLN6-202ENST00000538696 VCPP55072 806 aaKnown RBP17.78■□□□□ 0.44
CLN6-202ENST00000538696 CA9Q16790 459 aa17.78■□□□□ 0.44
CLN6-202ENST00000538696 EFHC2Q5JST6 749 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms