RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 ARL4AP40617 200 aa12.3□□□□□ -0.44
CPNE8-203ENST00000538596 SLC1A6P48664 564 aa12.3□□□□□ -0.44
CPNE8-203ENST00000538596 RAP1GDS1P52306 607 aa12.3□□□□□ -0.44
CPNE8-203ENST00000538596 BCAT1P54687 386 aa12.3□□□□□ -0.44
CPNE8-203ENST00000538596 SOX4Q06945 474 aaPredicted RBP12.3□□□□□ -0.44
CPNE8-203ENST00000538596 NME3Q13232 169 aa12.3□□□□□ -0.44
CPNE8-203ENST00000538596 TUBB3Q13509 450 aa12.3□□□□□ -0.44
CPNE8-203ENST00000538596 PEX6Q13608 980 aa12.3□□□□□ -0.44
CPNE8-203ENST00000538596 PCLAFQ15004 111 aa12.3□□□□□ -0.44
CPNE8-203ENST00000538596 OTUD1Q5VV17 481 aaPredicted RBP12.3□□□□□ -0.44
CPNE8-203ENST00000538596 TMEM154Q6P9G4 183 aa12.3□□□□□ -0.44
CPNE8-203ENST00000538596 SLC27A1Q6PCB7 646 aa12.3□□□□□ -0.44
CPNE8-203ENST00000538596 ZDHHC17Q8IUH5 632 aa12.3□□□□□ -0.44
CPNE8-203ENST00000538596 BEST2Q8NFU1 509 aa12.3□□□□□ -0.44
CPNE8-203ENST00000538596 ADAM32Q8TC27 787 aa12.3□□□□□ -0.44
CPNE8-203ENST00000538596 PGBD4Q96DM1 585 aa12.3□□□□□ -0.44
CPNE8-203ENST00000538596 CDCA5Q96FF9 252 aa12.3□□□□□ -0.44
CPNE8-203ENST00000538596 ADAMTS10Q9H324 1103 aa12.3□□□□□ -0.44
CPNE8-203ENST00000538596 ADARB2Q9NS39 739 aaKnown RBP12.3□□□□□ -0.44
CPNE8-203ENST00000538596 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.3□□□□□ -0.44
CPNE8-203ENST00000538596 TMEM216Q9P0N5 145 aa12.3□□□□□ -0.44
CPNE8-203ENST00000538596 CACNG4Q9UBN1 327 aa12.3□□□□□ -0.44
CPNE8-203ENST00000538596 FZD10Q9ULW2 581 aa12.3□□□□□ -0.44
CPNE8-203ENST00000538596 LIN7AO14910 233 aaPredicted RBP12.3□□□□□ -0.44
CPNE8-203ENST00000538596 PLIN3O60664 434 aa12.3□□□□□ -0.44
CPNE8-203ENST00000538596 ALDH1A2O94788 518 aa12.3□□□□□ -0.44
CPNE8-203ENST00000538596 SNAI1O95863 264 aaPredicted RBP12.3□□□□□ -0.44
CPNE8-203ENST00000538596 AMHP03971 560 aa12.3□□□□□ -0.44
CPNE8-203ENST00000538596 ITGA2BP08514 1039 aa12.3□□□□□ -0.44
CPNE8-203ENST00000538596 SMPD1P17405 629 aa12.3□□□□□ -0.44
CPNE8-203ENST00000538596 PDE1BQ01064 536 aa12.3□□□□□ -0.44
CPNE8-203ENST00000538596 ZNF792Q3KQV3 632 aa12.3□□□□□ -0.44
CPNE8-203ENST00000538596 FBXO47Q5MNV8 452 aa12.3□□□□□ -0.44
CPNE8-203ENST00000538596 SYPL2Q5VXT5 272 aa12.3□□□□□ -0.44
CPNE8-203ENST00000538596 C9orf131Q5VYM1 1079 aa12.3□□□□□ -0.44
CPNE8-203ENST00000538596 STEAP4Q687X5 459 aa12.3□□□□□ -0.44
CPNE8-203ENST00000538596 TIFABQ6ZNK6 161 aa12.3□□□□□ -0.44
CPNE8-203ENST00000538596 MARK2Q7KZI7 788 aaKnown RBP12.3□□□□□ -0.44
CPNE8-203ENST00000538596 PIGZQ86VD9 579 aa12.3□□□□□ -0.44
CPNE8-203ENST00000538596 TNS4Q8IZW8 715 aa12.3□□□□□ -0.44
CPNE8-203ENST00000538596 CFAP61Q8NHU2 1237 aa12.3□□□□□ -0.44
CPNE8-203ENST00000538596 MOCOSQ96EN8 888 aa12.3□□□□□ -0.44
CPNE8-203ENST00000538596 FCRL3Q96P31 734 aaPredicted RBP12.3□□□□□ -0.44
CPNE8-203ENST00000538596 OXCT2Q9BYC2 517 aaPredicted RBP12.3□□□□□ -0.44
CPNE8-203ENST00000538596 PRDM12Q9H4Q4 367 aa12.3□□□□□ -0.44
CPNE8-203ENST00000538596 ACSS2Q9NR19 701 aa12.3□□□□□ -0.44
CPNE8-203ENST00000538596 KPNA7A9QM74 516 aa12.29□□□□□ -0.44
CPNE8-203ENST00000538596 FAM72CH0Y354 149 aa12.29□□□□□ -0.44
CPNE8-203ENST00000538596 TM7SF2O76062 418 aa12.29□□□□□ -0.44
CPNE8-203ENST00000538596 SERPINA6P08185 405 aa12.29□□□□□ -0.44
CPNE8-203ENST00000538596 KLC1Q07866 573 aa12.29□□□□□ -0.44
CPNE8-203ENST00000538596 WASHC5Q12768 1159 aa12.29□□□□□ -0.44
CPNE8-203ENST00000538596 PPIL2Q13356 520 aa12.29□□□□□ -0.44
CPNE8-203ENST00000538596 DCAF4L1Q3SXM0 396 aa12.29□□□□□ -0.44
CPNE8-203ENST00000538596 RALGPS1Q5JS13 557 aa12.29□□□□□ -0.44
CPNE8-203ENST00000538596 FAM72AQ5TYM5 149 aa12.29□□□□□ -0.44
CPNE8-203ENST00000538596 FAM72DQ6L9T8 149 aa12.29□□□□□ -0.44
CPNE8-203ENST00000538596 LRRC8BQ6P9F7 803 aa12.29□□□□□ -0.44
CPNE8-203ENST00000538596 C4orf22Q6V702 233 aa12.29□□□□□ -0.44
CPNE8-203ENST00000538596 HFE2Q6ZVN8 426 aa12.29□□□□□ -0.44
CPNE8-203ENST00000538596 CTU1Q7Z7A3 348 aaKnown RBP12.29□□□□□ -0.44
CPNE8-203ENST00000538596 UNC93AQ86WB7 457 aa12.29□□□□□ -0.44
CPNE8-203ENST00000538596 FAM72BQ86X60 149 aa12.29□□□□□ -0.44
CPNE8-203ENST00000538596 ZNF567Q8N184 647 aa12.29□□□□□ -0.44
CPNE8-203ENST00000538596 RNF169Q8NCN4 708 aa12.29□□□□□ -0.44
CPNE8-203ENST00000538596 PIWIL2Q8TC59 973 aaKnown RBP12.29□□□□□ -0.44
CPNE8-203ENST00000538596 RNF139Q8WU17 664 aa12.29□□□□□ -0.44
CPNE8-203ENST00000538596 TTC1Q99614 292 aa12.29□□□□□ -0.44
CPNE8-203ENST00000538596 MORF4L1Q9UBU8 362 aa12.29□□□□□ -0.44
CPNE8-203ENST00000538596 ZNF487B1APH4 448 aa12.29□□□□□ -0.44
CPNE8-203ENST00000538596 MAGEC1O60732 1142 aa12.29□□□□□ -0.44
CPNE8-203ENST00000538596 MATKP42679 507 aa12.29□□□□□ -0.44
CPNE8-203ENST00000538596 PGGT1BP53609 377 aa12.29□□□□□ -0.44
CPNE8-203ENST00000538596 SARNPP82979 210 aaKnown RBP12.29□□□□□ -0.44
CPNE8-203ENST00000538596 DPY19L2Q6NUT2 758 aa12.29□□□□□ -0.44
CPNE8-203ENST00000538596 KYAT3Q6YP21 454 aaKnown RBP12.29□□□□□ -0.44
CPNE8-203ENST00000538596 ARCQ7LC44 396 aa12.29□□□□□ -0.44
CPNE8-203ENST00000538596 OSTM1Q86WC4 334 aa12.29□□□□□ -0.44
CPNE8-203ENST00000538596 RASSF3Q86WH2 238 aa12.29□□□□□ -0.44
CPNE8-203ENST00000538596 HACE1Q8IYU2 909 aa12.29□□□□□ -0.44
CPNE8-203ENST00000538596 EFCAB3Q8N7B9 438 aa12.29□□□□□ -0.44
CPNE8-203ENST00000538596 LRRC52Q8N7C0 313 aa12.29□□□□□ -0.44
CPNE8-203ENST00000538596 GSTCDQ8NEC7 633 aa12.29□□□□□ -0.44
CPNE8-203ENST00000538596 OR52K1Q8NGK4 314 aa12.29□□□□□ -0.44
CPNE8-203ENST00000538596 TMEM40Q8WWA1 233 aa12.29□□□□□ -0.44
CPNE8-203ENST00000538596 APBB2Q92870 758 aa12.29□□□□□ -0.44
CPNE8-203ENST00000538596 SORT1Q99523 831 aa12.29□□□□□ -0.44
CPNE8-203ENST00000538596 KATNBL1Q9H079 304 aa12.29□□□□□ -0.44
CPNE8-203ENST00000538596 SNX25Q9H3E2 840 aa12.29□□□□□ -0.44
CPNE8-203ENST00000538596 PLEKHA5Q9HAU0 1116 aa12.29□□□□□ -0.44
CPNE8-203ENST00000538596 DLGAP2Q9P1A6 1054 aa12.29□□□□□ -0.44
CPNE8-203ENST00000538596 GTF2IRD1Q9UHL9 959 aa12.29□□□□□ -0.44
CPNE8-203ENST00000538596 RPS6KL1Q9Y6S9 549 aa12.29□□□□□ -0.44
CPNE8-203ENST00000538596 NUP205Q92621 2012 aa12.29□□□□□ -0.44
CPNE8-203ENST00000538596 SMIM28A0A1B0GU29 152 aa12.28□□□□□ -0.44
CPNE8-203ENST00000538596 GPR32O75388 356 aa12.28□□□□□ -0.44
CPNE8-203ENST00000538596 BAG2O95816 211 aa12.28□□□□□ -0.44
CPNE8-203ENST00000538596 CPOXP36551 454 aa12.28□□□□□ -0.44
CPNE8-203ENST00000538596 SNX16P57768 344 aa12.28□□□□□ -0.44
CPNE8-203ENST00000538596 C1orf146Q5VVC0 180 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms