RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 RNASEH1O60930 286 aaKnown RBP10.16□□□□□ -0.78
COL4A6-208ENST00000538570 RHOCP08134 193 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 NOS3P29474 1203 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 GRK4P32298 578 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 CASP5P51878 434 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 RHOAP61586 193 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 ADAM17P78536 824 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 USF2Q15853 346 aaPredicted RBP10.16□□□□□ -0.78
COL4A6-208ENST00000538570 C2CD6Q53TS8 623 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 PTAR1Q7Z6K3 402 aaPredicted RBP10.16□□□□□ -0.78
COL4A6-208ENST00000538570 STK32CQ86UX6 486 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 CACTIN-AS1Q8N1I8 211 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 FBXO25Q8TCJ0 367 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 RORBQ92753 470 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 ANKZF1Q9H8Y5 726 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 NT5MQ9NPB1 228 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 PLCL2Q9UPR0 1127 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 NDUFAF1Q9Y375 327 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 COMMD3-BMI1R4GMX3 469 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 CCDC154A6NI56 674 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 NCAM2O15394 837 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 ADCY6O43306 1168 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 CCNT2O60583 730 aaKnown RBP10.16□□□□□ -0.78
COL4A6-208ENST00000538570 CBFA2T3O75081 653 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 STAG3L1P0CL83 205 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 USP4Q13107 963 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 BMPR2Q13873 1038 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 FIGNQ5HY92 759 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 ATG14Q6ZNE5 492 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 HERC6Q8IVU3 1022 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 HPS1Q92902 700 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 STON1Q9Y6Q2 735 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 LDLRP01130 860 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 SERPINE1P05121 402 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 JAK1P23458 1154 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 TRAF3Q13114 568 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 TCHHL1Q5QJ38 904 aaPredicted RBP10.16□□□□□ -0.78
COL4A6-208ENST00000538570 NEK5Q6P3R8 708 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 ENGASEQ8NFI3 743 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 MRPS31Q92665 395 aaKnown RBP10.16□□□□□ -0.78
COL4A6-208ENST00000538570 TMEM237Q96Q45 408 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 UGT2B28Q9BY64 529 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 PCDH9Q9HC56 1237 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 KLHL1Q9NR64 748 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 NAALADL1Q9UQQ1 740 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 HBS1LQ9Y450 684 aaKnown RBP10.16□□□□□ -0.78
COL4A6-208ENST00000538570 CLOCKO15516 846 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 JCHAINP01591 159 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 ZNF806P0C7X5 589 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 FOSL1P15407 271 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 MYL12AP19105 171 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 CDH3P22223 829 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 CHRNA5P30532 468 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 RAP1GAPP47736 663 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 ILF2Q12905 390 aaKnown RBP10.16□□□□□ -0.78
COL4A6-208ENST00000538570 FASTKQ14296 549 aaKnown RBP10.16□□□□□ -0.78
COL4A6-208ENST00000538570 NR1D2Q14995 579 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 ZNF484Q5JVG2 852 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 OTUD3Q5T2D3 398 aaPredicted RBP10.16□□□□□ -0.78
COL4A6-208ENST00000538570 N4BP2L1Q5TBK1 243 aaPredicted RBP10.16□□□□□ -0.78
COL4A6-208ENST00000538570 ZFP1Q6P2D0 407 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 IKBIPQ70UQ0 350 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 RNASE11Q8TAA1 199 aaKnown RBP10.16□□□□□ -0.78
COL4A6-208ENST00000538570 SLITRK2Q9H156 845 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 PLGRKTQ9HBL7 147 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 VPS28Q9UK41 221 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 VAV3Q9UKW4 847 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 RAD51BO15315 384 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 INPP4BO15327 924 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 IL6P05231 212 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 CYP2A7P20853 494 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 CYP2F1P24903 491 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 ALDH9A1P49189 494 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 CASP4P49662 377 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 MAPK10P53779 464 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 BNIP1Q12981 228 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 PDCD10Q9BUL8 212 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 ADI1Q9BV57 179 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 MROH7Q68CQ1 1323 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 SETBP1Q9Y6X0 1596 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 H7C0S8 307 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 RIPK2O43353 540 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 HS6ST1O60243 411 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 RAG1P15918 1043 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 CD44P16070 742 aaKnown RBP10.16□□□□□ -0.78
COL4A6-208ENST00000538570 PAICSP22234 425 aaKnown RBP10.16□□□□□ -0.78
COL4A6-208ENST00000538570 CD151P48509 253 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 ZNF157P51786 506 aaPredicted RBP10.16□□□□□ -0.78
COL4A6-208ENST00000538570 STARD3Q14849 445 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 PLCL1Q15111 1095 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 GNASQ5JWF2 1037 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 AGAP11Q8TF27 550 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 TPD52L3Q96J77 140 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 RRN3Q9NYV6 651 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 SH3BP4Q9P0V3 963 aa10.16□□□□□ -0.78
COL4A6-208ENST00000538570 SF3B1O75533 1304 aaKnown RBP eCLIP10.15□□□□□ -0.78
COL4A6-208ENST00000538570 NOTOA8MTQ0 251 aa10.15□□□□□ -0.78
COL4A6-208ENST00000538570 B3GAT3O94766 335 aa10.15□□□□□ -0.78
COL4A6-208ENST00000538570 BMP10O95393 424 aa10.15□□□□□ -0.78
COL4A6-208ENST00000538570 ABCB1P08183 1280 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms