RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 EFR3BQ9Y2G0 817 aa11.01□□□□□ -0.65
TNFRSF1A-211ENST00000538363 SNX10Q9Y5X0 201 aa11.01□□□□□ -0.65
TNFRSF1A-211ENST00000538363 HS3ST4Q9Y661 456 aa11.01□□□□□ -0.65
TNFRSF1A-211ENST00000538363 CHD9Q3L8U1 2897 aa11.01□□□□□ -0.65
TNFRSF1A-211ENST00000538363 E9PAM4 449 aa11□□□□□ -0.65
TNFRSF1A-211ENST00000538363 LEFTY2O00292 366 aa11□□□□□ -0.65
TNFRSF1A-211ENST00000538363 SLC9A3R1O14745 358 aaPredicted RBP11□□□□□ -0.65
TNFRSF1A-211ENST00000538363 MCF2LO15068 1137 aa11□□□□□ -0.65
TNFRSF1A-211ENST00000538363 FANCGO15287 622 aa11□□□□□ -0.65
TNFRSF1A-211ENST00000538363 FGF10O15520 208 aaPredicted RBP11□□□□□ -0.65
TNFRSF1A-211ENST00000538363 TADA3O75528 432 aa11□□□□□ -0.65
TNFRSF1A-211ENST00000538363 FOSL2P15408 326 aa11□□□□□ -0.65
TNFRSF1A-211ENST00000538363 CEBPBP17676 345 aa11□□□□□ -0.65
TNFRSF1A-211ENST00000538363 TACR2P21452 398 aa11□□□□□ -0.65
TNFRSF1A-211ENST00000538363 TGM2P21980 687 aa11□□□□□ -0.65
TNFRSF1A-211ENST00000538363 SERPINB6P35237 376 aa11□□□□□ -0.65
TNFRSF1A-211ENST00000538363 CHKAP35790 457 aa11□□□□□ -0.65
TNFRSF1A-211ENST00000538363 GGCXP38435 758 aa11□□□□□ -0.65
TNFRSF1A-211ENST00000538363 HCAR3P49019 387 aa11□□□□□ -0.65
TNFRSF1A-211ENST00000538363 EPHA5P54756 1037 aa11□□□□□ -0.65
TNFRSF1A-211ENST00000538363 MLLT6P55198 1093 aaPredicted RBP11□□□□□ -0.65
TNFRSF1A-211ENST00000538363 SLC7A9P82251 487 aa11□□□□□ -0.65
TNFRSF1A-211ENST00000538363 PPP1R7Q15435 360 aa11□□□□□ -0.65
TNFRSF1A-211ENST00000538363 STXBP5Q5T5C0 1151 aa11□□□□□ -0.65
TNFRSF1A-211ENST00000538363 ADGRF1Q5T601 910 aa11□□□□□ -0.65
TNFRSF1A-211ENST00000538363 TMEM184AQ6ZMB5 413 aa11□□□□□ -0.65
TNFRSF1A-211ENST00000538363 MAATS1Q7Z4T9 603 aa11□□□□□ -0.65
TNFRSF1A-211ENST00000538363 TMEM150AQ86TG1 271 aa11□□□□□ -0.65
TNFRSF1A-211ENST00000538363 VSIG1Q86XK7 387 aa11□□□□□ -0.65
TNFRSF1A-211ENST00000538363 CCNYQ8ND76 341 aa11□□□□□ -0.65
TNFRSF1A-211ENST00000538363 SPATA4Q8NEY3 305 aa11□□□□□ -0.65
TNFRSF1A-211ENST00000538363 ITFG1Q8TB96 612 aa11□□□□□ -0.65
TNFRSF1A-211ENST00000538363 ZSCAN18Q8TBC5 510 aaPredicted RBP11□□□□□ -0.65
TNFRSF1A-211ENST00000538363 SH3RF2Q8TEC5 729 aa11□□□□□ -0.65
TNFRSF1A-211ENST00000538363 GRK7Q8WTQ7 553 aa11□□□□□ -0.65
TNFRSF1A-211ENST00000538363 DDI1Q8WTU0 396 aa11□□□□□ -0.65
TNFRSF1A-211ENST00000538363 C1orf54Q8WWF1 131 aa11□□□□□ -0.65
TNFRSF1A-211ENST00000538363 RSAD2Q8WXG1 361 aa11□□□□□ -0.65
TNFRSF1A-211ENST00000538363 SLC39A13Q96H72 371 aa11□□□□□ -0.65
TNFRSF1A-211ENST00000538363 C1orf74Q96LT6 269 aa11□□□□□ -0.65
TNFRSF1A-211ENST00000538363 CSPG4P5Q96PW8 444 aa11□□□□□ -0.65
TNFRSF1A-211ENST00000538363 KRT12Q99456 494 aa11□□□□□ -0.65
TNFRSF1A-211ENST00000538363 ADAM33Q9BZ11 813 aa11□□□□□ -0.65
TNFRSF1A-211ENST00000538363 ZYG11BQ9C0D3 744 aa11□□□□□ -0.65
TNFRSF1A-211ENST00000538363 SMG9Q9H0W8 520 aaKnown RBP11□□□□□ -0.65
TNFRSF1A-211ENST00000538363 ADAM7Q9H2U9 754 aa11□□□□□ -0.65
TNFRSF1A-211ENST00000538363 TTC7AQ9ULT0 858 aaPredicted RBP11□□□□□ -0.65
TNFRSF1A-211ENST00000538363 PRRC2BQ5JSZ5 2229 aaKnown RBP11□□□□□ -0.65
TNFRSF1A-211ENST00000538363 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.99□□□□□ -0.65
TNFRSF1A-211ENST00000538363 GOLGA6L7A0A1B0GV03 622 aa10.99□□□□□ -0.65
TNFRSF1A-211ENST00000538363 H0Y626 953 aa10.99□□□□□ -0.65
TNFRSF1A-211ENST00000538363 SCAMP3O14828 347 aaKnown RBP10.99□□□□□ -0.65
TNFRSF1A-211ENST00000538363 STK10O94804 968 aaKnown RBP10.99□□□□□ -0.65
TNFRSF1A-211ENST00000538363 LRIG2O94898 1065 aa10.99□□□□□ -0.65
TNFRSF1A-211ENST00000538363 GAS8O95995 478 aa10.99□□□□□ -0.65
TNFRSF1A-211ENST00000538363 ERCC2P18074 760 aa10.99□□□□□ -0.65
TNFRSF1A-211ENST00000538363 CHRNA3P32297 505 aa10.99□□□□□ -0.65
TNFRSF1A-211ENST00000538363 PTPN7P35236 360 aa10.99□□□□□ -0.65
TNFRSF1A-211ENST00000538363 CCR2P41597 374 aa10.99□□□□□ -0.65
TNFRSF1A-211ENST00000538363 IFNAR2P48551 515 aa10.99□□□□□ -0.65
TNFRSF1A-211ENST00000538363 EIF3EP60228 445 aaKnown RBP10.99□□□□□ -0.65
TNFRSF1A-211ENST00000538363 ZNF177Q13360 481 aaPredicted RBP10.99□□□□□ -0.65
TNFRSF1A-211ENST00000538363 AUHQ13825 339 aaKnown RBP10.99□□□□□ -0.65
TNFRSF1A-211ENST00000538363 SLC5A9Q2M3M2 681 aa10.99□□□□□ -0.65
TNFRSF1A-211ENST00000538363 MS4A13Q5J8X5 152 aa10.99□□□□□ -0.65
TNFRSF1A-211ENST00000538363 C8orf74Q6P047 294 aa10.99□□□□□ -0.65
TNFRSF1A-211ENST00000538363 BBS12Q6ZW61 710 aa10.99□□□□□ -0.65
TNFRSF1A-211ENST00000538363 BNIPLQ7Z465 357 aa10.99□□□□□ -0.65
TNFRSF1A-211ENST00000538363 ARID3BQ8IVW6 561 aaPredicted RBP10.99□□□□□ -0.65
TNFRSF1A-211ENST00000538363 CELF5Q8N6W0 485 aaKnown RBP10.99□□□□□ -0.65
TNFRSF1A-211ENST00000538363 NSMCE1Q8WV22 266 aa10.99□□□□□ -0.65
TNFRSF1A-211ENST00000538363 MYLIPQ8WY64 445 aa10.99□□□□□ -0.65
TNFRSF1A-211ENST00000538363 AZIN2Q96A70 460 aa10.99□□□□□ -0.65
TNFRSF1A-211ENST00000538363 TMA16Q96EY4 203 aaKnown RBP10.99□□□□□ -0.65
TNFRSF1A-211ENST00000538363 NECTIN4Q96NY8 510 aa10.99□□□□□ -0.65
TNFRSF1A-211ENST00000538363 SLC22A12Q96S37 553 aa10.99□□□□□ -0.65
TNFRSF1A-211ENST00000538363 FRMD8P1Q9BZ68 369 aaPredicted RBP10.99□□□□□ -0.65
TNFRSF1A-211ENST00000538363 MAGEB5Q9BZ81 275 aa10.99□□□□□ -0.65
TNFRSF1A-211ENST00000538363 L2HGDHQ9H9P8 463 aa10.99□□□□□ -0.65
TNFRSF1A-211ENST00000538363 KIF9Q9HAQ2 790 aa10.99□□□□□ -0.65
TNFRSF1A-211ENST00000538363 TBC1D14Q9P2M4 693 aa10.99□□□□□ -0.65
TNFRSF1A-211ENST00000538363 CD207Q9UJ71 328 aa10.99□□□□□ -0.65
TNFRSF1A-211ENST00000538363 AGO1Q9UL18 857 aaKnown RBP10.99□□□□□ -0.65
TNFRSF1A-211ENST00000538363 ARHGAP26Q9UNA1 814 aa10.99□□□□□ -0.65
TNFRSF1A-211ENST00000538363 E2F8A0AVK6 867 aa10.98□□□□□ -0.65
TNFRSF1A-211ENST00000538363 ZNF487B1APH4 448 aa10.98□□□□□ -0.65
TNFRSF1A-211ENST00000538363 FAM72CH0Y354 149 aa10.98□□□□□ -0.65
TNFRSF1A-211ENST00000538363 APOC4-APOC2K7ER74 178 aa10.98□□□□□ -0.65
TNFRSF1A-211ENST00000538363 SGK1O00141 431 aa10.98□□□□□ -0.65
TNFRSF1A-211ENST00000538363 DFFAO00273 331 aa10.98□□□□□ -0.65
TNFRSF1A-211ENST00000538363 PDE2AO00408 941 aaPredicted RBP10.98□□□□□ -0.65
TNFRSF1A-211ENST00000538363 TRDMT1O14717 391 aaKnown RBP10.98□□□□□ -0.65
TNFRSF1A-211ENST00000538363 PPP1R12AO14974 1030 aaPredicted RBP10.98□□□□□ -0.65
TNFRSF1A-211ENST00000538363 TBL1XO60907 577 aa10.98□□□□□ -0.65
TNFRSF1A-211ENST00000538363 PHF2O75151 1096 aa10.98□□□□□ -0.65
TNFRSF1A-211ENST00000538363 LATS1O95835 1130 aa10.98□□□□□ -0.65
TNFRSF1A-211ENST00000538363 GLP2RO95838 553 aa10.98□□□□□ -0.65
TNFRSF1A-211ENST00000538363 IGLV3-27P01718 113 aa10.98□□□□□ -0.65
TNFRSF1A-211ENST00000538363 APOC2P02655 101 aa10.98□□□□□ -0.65
TNFRSF1A-211ENST00000538363 MX2P20592 715 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms