RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 NUP205Q92621 2012 aa14.42□□□□□ -0.1
LIMK1-208ENST00000538333 WDR27A2RRH5 827 aa14.42□□□□□ -0.1
LIMK1-208ENST00000538333 I3L4J1 428 aa14.42□□□□□ -0.1
LIMK1-208ENST00000538333 COPEO14579 308 aa14.42□□□□□ -0.1
LIMK1-208ENST00000538333 DCTN3O75935 186 aa14.42□□□□□ -0.1
LIMK1-208ENST00000538333 KRT38O76015 456 aa14.42□□□□□ -0.1
LIMK1-208ENST00000538333 SERPINB4P48594 390 aa14.42□□□□□ -0.1
LIMK1-208ENST00000538333 TRIM32Q13049 653 aa14.42□□□□□ -0.1
LIMK1-208ENST00000538333 BMPR2Q13873 1038 aa14.42□□□□□ -0.1
LIMK1-208ENST00000538333 CCNYQ8ND76 341 aa14.42□□□□□ -0.1
LIMK1-208ENST00000538333 KLHL29Q96CT2 875 aa14.42□□□□□ -0.1
LIMK1-208ENST00000538333 PKMYT1Q99640 499 aa14.42□□□□□ -0.1
LIMK1-208ENST00000538333 SPC25Q9HBM1 224 aa14.42□□□□□ -0.1
LIMK1-208ENST00000538333 NPHS2Q9NP85 383 aa14.42□□□□□ -0.1
LIMK1-208ENST00000538333 DDIT4Q9NX09 232 aa14.42□□□□□ -0.1
LIMK1-208ENST00000538333 RRN3Q9NYV6 651 aa14.42□□□□□ -0.1
LIMK1-208ENST00000538333 PLLPQ9Y342 182 aa14.42□□□□□ -0.1
LIMK1-208ENST00000538333 SDR42E2A6NKP2 422 aa14.41□□□□□ -0.1
LIMK1-208ENST00000538333 IL1BP01584 269 aa14.41□□□□□ -0.1
LIMK1-208ENST00000538333 CYP11A1P05108 521 aa14.41□□□□□ -0.1
LIMK1-208ENST00000538333 ODC1P11926 461 aa14.41□□□□□ -0.1
LIMK1-208ENST00000538333 ALDH3A1P30838 453 aa14.41□□□□□ -0.1
LIMK1-208ENST00000538333 THPOP40225 353 aa14.41□□□□□ -0.1
LIMK1-208ENST00000538333 RAB27AP51159 221 aa14.41□□□□□ -0.1
LIMK1-208ENST00000538333 CRADDP78560 199 aa14.41□□□□□ -0.1
LIMK1-208ENST00000538333 NIPAL4Q0D2K0 466 aa14.41□□□□□ -0.1
LIMK1-208ENST00000538333 SETDB1Q15047 1291 aa14.41□□□□□ -0.1
LIMK1-208ENST00000538333 FYB2Q5VWT5 728 aa14.41□□□□□ -0.1
LIMK1-208ENST00000538333 PM20D1Q6GTS8 502 aa14.41□□□□□ -0.1
LIMK1-208ENST00000538333 UNC5BQ8IZJ1 945 aa14.41□□□□□ -0.1
LIMK1-208ENST00000538333 NPWQ8N729 165 aa14.41□□□□□ -0.1
LIMK1-208ENST00000538333 TTC17Q96AE7 1141 aa14.41□□□□□ -0.1
LIMK1-208ENST00000538333 FERMT1Q9BQL6 677 aa14.41□□□□□ -0.1
LIMK1-208ENST00000538333 GORASP1Q9BQQ3 440 aa14.41□□□□□ -0.1
LIMK1-208ENST00000538333 ACBD6Q9BR61 282 aa14.41□□□□□ -0.1
LIMK1-208ENST00000538333 COLEC11Q9BWP8 271 aa14.41□□□□□ -0.1
LIMK1-208ENST00000538333 TSSK1BQ9BXA7 367 aa14.41□□□□□ -0.1
LIMK1-208ENST00000538333 TRIM33Q9UPN9 1127 aa14.41□□□□□ -0.1
LIMK1-208ENST00000538333 RAD54BQ9Y620 910 aa14.41□□□□□ -0.1
LIMK1-208ENST00000538333 CEP350Q5VT06 3117 aa14.41□□□□□ -0.1
LIMK1-208ENST00000538333 SHROOM3Q8TF72 1996 aa14.41□□□□□ -0.1
LIMK1-208ENST00000538333 A0A0U1RQF3 1178 aa14.41□□□□□ -0.1
LIMK1-208ENST00000538333 KLF11O14901 512 aa14.41□□□□□ -0.1
LIMK1-208ENST00000538333 POMCP01189 267 aa14.41□□□□□ -0.1
LIMK1-208ENST00000538333 ASGR1P07306 291 aa14.41□□□□□ -0.1
LIMK1-208ENST00000538333 CXCR3P49682 368 aa14.41□□□□□ -0.1
LIMK1-208ENST00000538333 FLT3LGP49771 235 aa14.41□□□□□ -0.1
LIMK1-208ENST00000538333 SERPINB9P50453 376 aa14.41□□□□□ -0.1
LIMK1-208ENST00000538333 TPI1P60174 286 aa14.41□□□□□ -0.1
LIMK1-208ENST00000538333 PPIDQ08752 370 aaKnown RBP14.41□□□□□ -0.1
LIMK1-208ENST00000538333 RIPK1Q13546 671 aa14.41□□□□□ -0.1
LIMK1-208ENST00000538333 SNCBQ16143 134 aa14.41□□□□□ -0.1
LIMK1-208ENST00000538333 INTS6LQ5JSJ4 861 aaKnown RBP14.41□□□□□ -0.1
LIMK1-208ENST00000538333 SPDYAQ5MJ70 313 aa14.41□□□□□ -0.1
LIMK1-208ENST00000538333 TIFABQ6ZNK6 161 aa14.41□□□□□ -0.1
LIMK1-208ENST00000538333 MARK2Q7KZI7 788 aaKnown RBP14.41□□□□□ -0.1
LIMK1-208ENST00000538333 NLRP9Q7RTR0 991 aa14.41□□□□□ -0.1
LIMK1-208ENST00000538333 SEPT10Q9P0V9 454 aa14.41□□□□□ -0.1
LIMK1-208ENST00000538333 M0QZQ0 153 aa14.4□□□□□ -0.1
LIMK1-208ENST00000538333 KCNK1O00180 336 aa14.4□□□□□ -0.1
LIMK1-208ENST00000538333 CA12O43570 354 aa14.4□□□□□ -0.1
LIMK1-208ENST00000538333 B3GAT3O94766 335 aa14.4□□□□□ -0.1
LIMK1-208ENST00000538333 TROVE2P10155 538 aaKnown RBP eCLIP14.4□□□□□ -0.1
LIMK1-208ENST00000538333 BGNP21810 368 aa14.4□□□□□ -0.1
LIMK1-208ENST00000538333 PTPN3P26045 913 aa14.4□□□□□ -0.1
LIMK1-208ENST00000538333 MGAT1P26572 445 aa14.4□□□□□ -0.1
LIMK1-208ENST00000538333 BRCC3P46736 316 aa14.4□□□□□ -0.1
LIMK1-208ENST00000538333 FCGRTP55899 365 aa14.4□□□□□ -0.1
LIMK1-208ENST00000538333 SREBF2Q12772 1141 aa14.4□□□□□ -0.1
LIMK1-208ENST00000538333 OVGP1Q12889 678 aa14.4□□□□□ -0.1
LIMK1-208ENST00000538333 PAN2Q504Q3 1202 aaKnown RBP14.4□□□□□ -0.1
LIMK1-208ENST00000538333 CCSAPQ6IQ19 270 aaPredicted RBP14.4□□□□□ -0.1
LIMK1-208ENST00000538333 CCNJLQ8IV13 435 aa14.4□□□□□ -0.1
LIMK1-208ENST00000538333 SCML4Q8N228 414 aa14.4□□□□□ -0.1
LIMK1-208ENST00000538333 KIF2BQ8N4N8 673 aa14.4□□□□□ -0.1
LIMK1-208ENST00000538333 RFWD2Q8NHY2 731 aa14.4□□□□□ -0.1
LIMK1-208ENST00000538333 DEPDC1BQ8WUY9 529 aa14.4□□□□□ -0.1
LIMK1-208ENST00000538333 IRGQQ8WZA9 623 aa14.4□□□□□ -0.1
LIMK1-208ENST00000538333 EDEM1Q92611 657 aa14.4□□□□□ -0.1
LIMK1-208ENST00000538333 GPBP1L1Q9HC44 474 aaPredicted RBP14.4□□□□□ -0.1
LIMK1-208ENST00000538333 TMLHEQ9NVH6 421 aa14.4□□□□□ -0.1
LIMK1-208ENST00000538333 PIH1D1Q9NWS0 290 aaKnown RBP14.4□□□□□ -0.1
LIMK1-208ENST00000538333 NUMBLQ9Y6R0 609 aa14.4□□□□□ -0.1
LIMK1-208ENST00000538333 CASP8AP2Q9UKL3 1982 aa14.4□□□□□ -0.1
LIMK1-208ENST00000538333 ZNF189O75820 626 aaPredicted RBP14.4□□□□□ -0.1
LIMK1-208ENST00000538333 TGDSO95455 350 aa14.4□□□□□ -0.1
LIMK1-208ENST00000538333 ATP6V1G2O95670 118 aa14.4□□□□□ -0.1
LIMK1-208ENST00000538333 F9P00740 461 aa14.4□□□□□ -0.1
LIMK1-208ENST00000538333 KRT16P08779 473 aa14.4□□□□□ -0.1
LIMK1-208ENST00000538333 PGAM1P18669 254 aa14.4□□□□□ -0.1
LIMK1-208ENST00000538333 BDNFP23560 247 aa14.4□□□□□ -0.1
LIMK1-208ENST00000538333 SESN2P58004 480 aaPredicted RBP14.4□□□□□ -0.1
LIMK1-208ENST00000538333 CACNB2Q08289 660 aaPredicted RBP14.4□□□□□ -0.1
LIMK1-208ENST00000538333 LPIN1Q14693 890 aa14.4□□□□□ -0.1
LIMK1-208ENST00000538333 CRYMQ14894 314 aa14.4□□□□□ -0.1
LIMK1-208ENST00000538333 MROH9Q5TGP6 573 aa14.4□□□□□ -0.1
LIMK1-208ENST00000538333 KLHDC9Q8NEP7 349 aa14.4□□□□□ -0.1
LIMK1-208ENST00000538333 ZIC5Q96T25 663 aa14.4□□□□□ -0.1
LIMK1-208ENST00000538333 IQCGQ9H095 443 aaKnown RBP14.4□□□□□ -0.1
LIMK1-208ENST00000538333 XPNPEP3Q9NQH7 507 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms