RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 LRIG3Q6UXM1 1119 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 SLC51AQ86UW1 340 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 MTMR14Q8NCE2 650 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 SMG7Q92540 1137 aaKnown RBP5.49□□□□□ -1.53
LRP6-203ENST00000538239 ZFP42Q96MM3 310 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 FOXP3Q9BZS1 431 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 CARD9Q9H257 536 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 ETNK1Q9HBU6 452 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 ACP6Q9NPH0 428 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 TMPRSS4Q9NRS4 437 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 ARHGAP20Q9P2F6 1191 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 WARS2Q9UGM6 360 aaKnown RBP5.49□□□□□ -1.53
LRP6-203ENST00000538239 PADI4Q9UM07 663 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 SNX8Q9Y5X2 465 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 TMEM120BA0PK00 339 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 AMD1P17707 334 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 NOS2P35228 1153 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 WASP42768 502 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 PRIM2P49643 509 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 SLC24A5Q71RS6 500 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 UNC93AQ86WB7 457 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 CPA6Q8N4T0 437 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 ETNPPLQ8TBG4 499 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 ZNF556Q9HAH1 456 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 CFAP97Q9P2B7 532 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 SEPT3Q9UH03 358 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 DCDC2Q9UHG0 476 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 ASTN1O14525 1302 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 BCL9LQ86UU0 1499 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 MGAT4DA6NG13 374 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 EVPLLA8MZ36 301 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 F8W810 466 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 CHUKO15111 745 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 TRUB2O95900 331 aaKnown RBP5.48□□□□□ -1.53
LRP6-203ENST00000538239 ADH1CP00326 375 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 KRT20P35900 424 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 CD86P42081 329 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 NCKAP1LP55160 1127 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 TGM3Q08188 693 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 CCNI2Q6ZMN8 369 aaPredicted RBP5.48□□□□□ -1.53
LRP6-203ENST00000538239 EFL1Q7Z2Z2 1120 aaKnown RBP5.48□□□□□ -1.53
LRP6-203ENST00000538239 ICA1LQ8NDH6 482 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 OR5B17Q8NGF7 314 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 EPS8L3Q8TE67 593 aaKnown RBP5.48□□□□□ -1.53
LRP6-203ENST00000538239 WNT8BQ93098 351 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 MTFMTQ96DP5 389 aaKnown RBP5.48□□□□□ -1.53
LRP6-203ENST00000538239 DUSP9Q99956 384 aaKnown RBP5.48□□□□□ -1.53
LRP6-203ENST00000538239 POLR1EQ9GZS1 481 aaKnown RBP5.48□□□□□ -1.53
LRP6-203ENST00000538239 EVA1BQ9NVM1 165 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 A0A1W2PQH9 124 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 AKAP10O43572 662 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 TIMM44O43615 452 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 SH3BGRLO75368 114 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 CHKAP35790 457 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 PGM1P36871 562 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 GPR1P46091 355 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 SMAD3P84022 425 aaKnown RBP5.48□□□□□ -1.53
LRP6-203ENST00000538239 FPGSQ05932 587 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 PRPF39Q86UA1 669 aaKnown RBP5.48□□□□□ -1.53
LRP6-203ENST00000538239 BRI3BPQ8WY22 251 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 SLC35C1Q96A29 364 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 GRAMD1AQ96CP6 724 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 FRMD8Q9BZ67 464 aaPredicted RBP5.48□□□□□ -1.53
LRP6-203ENST00000538239 RHBGQ9H310 441 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 FAM153AQ9UHL3 310 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 ZNF112Q9UJU3 913 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 LMO7Q8WWI1 1683 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 GLRA3O75311 464 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 LGR5O75473 907 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 CDC25CP30307 473 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 ABL2P42684 1182 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 MPP3Q13368 585 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 CFAP52Q8N1V2 620 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 ACTL9Q8TC94 416 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 LRRN4Q8WUT4 740 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 BTN2A2Q8WVV5 523 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 TBCBQ99426 244 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 C2orf49Q9BVC5 232 aaPredicted RBP5.48□□□□□ -1.53
LRP6-203ENST00000538239 RPS6KB2Q9UBS0 482 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 AKAP12Q02952 1782 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 FZD9O00144 591 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 CYP7B1O75881 506 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 ZNF7P17097 686 aaPredicted RBP5.48□□□□□ -1.53
LRP6-203ENST00000538239 CYP2C18P33260 490 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 APLP1P51693 650 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 MCL1Q07820 350 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 CDH17Q12864 832 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 BMPR2Q13873 1038 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 HSP90AA5PQ58FG0 334 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 PPP1R26Q5T8A7 1209 aaPredicted RBP5.48□□□□□ -1.53
LRP6-203ENST00000538239 PIGZQ86VD9 579 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 KCNMB4Q86W47 210 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 MMGT1Q8N4V1 131 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 LZTR1Q8N653 840 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 PCYOX1LQ8NBM8 494 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 USP6NLQ92738 828 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 FAM84AQ96KN4 292 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 EIF2AQ9BY44 585 aaKnown RBP5.48□□□□□ -1.53
LRP6-203ENST00000538239 RGS18Q9NS28 235 aa5.48□□□□□ -1.53
LRP6-203ENST00000538239 H2AFY2Q9P0M6 372 aaPredicted RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms