RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 FAXCQ5TGI0 409 aa6.82□□□□□ -1.32
USP28-206ENST00000538224 FBXW10Q5XX13 1052 aa6.82□□□□□ -1.32
USP28-206ENST00000538224 PM20D1Q6GTS8 502 aa6.82□□□□□ -1.32
USP28-206ENST00000538224 CGB2Q6NT52 195 aa6.82□□□□□ -1.32
USP28-206ENST00000538224 CASC4Q6P4E1 433 aa6.82□□□□□ -1.32
USP28-206ENST00000538224 FAM171BQ6P995 826 aa6.82□□□□□ -1.32
USP28-206ENST00000538224 DCLRE1AQ6PJP8 1040 aa6.82□□□□□ -1.32
USP28-206ENST00000538224 GLB1LQ6UWU2 654 aa6.82□□□□□ -1.32
USP28-206ENST00000538224 FAM47EQ6ZV65 393 aa6.82□□□□□ -1.32
USP28-206ENST00000538224 ZNF534Q76KX8 674 aa6.82□□□□□ -1.32
USP28-206ENST00000538224 RNF180Q86T96 592 aa6.82□□□□□ -1.32
USP28-206ENST00000538224 LINC00523Q86TU6 105 aa6.82□□□□□ -1.32
USP28-206ENST00000538224 LRRC49Q8IUZ0 686 aa6.82□□□□□ -1.32
USP28-206ENST00000538224 IGDCC3Q8IVU1 814 aa6.82□□□□□ -1.32
USP28-206ENST00000538224 PARP9Q8IXQ6 854 aa6.82□□□□□ -1.32
USP28-206ENST00000538224 ARHGAP18Q8N392 663 aa6.82□□□□□ -1.32
USP28-206ENST00000538224 LZTR1Q8N653 840 aa6.82□□□□□ -1.32
USP28-206ENST00000538224 CCNYQ8ND76 341 aa6.82□□□□□ -1.32
USP28-206ENST00000538224 GSTCDQ8NEC7 633 aa6.82□□□□□ -1.32
USP28-206ENST00000538224 KLHDC9Q8NEP7 349 aa6.82□□□□□ -1.32
USP28-206ENST00000538224 URGCPQ8TCY9 931 aa6.82□□□□□ -1.32
USP28-206ENST00000538224 MAGEC3Q8TD91 643 aa6.82□□□□□ -1.32
USP28-206ENST00000538224 C10orf82Q8WW14 230 aa6.82□□□□□ -1.32
USP28-206ENST00000538224 SREK1Q8WXA9 508 aaKnown RBP6.82□□□□□ -1.32
USP28-206ENST00000538224 RSPH1Q8WYR4 309 aa6.82□□□□□ -1.32
USP28-206ENST00000538224 INPP5DQ92835 1189 aa6.82□□□□□ -1.32
USP28-206ENST00000538224 KLHL29Q96CT2 875 aa6.82□□□□□ -1.32
USP28-206ENST00000538224 SUSD3Q96L08 255 aa6.82□□□□□ -1.32
USP28-206ENST00000538224 SMOQ99835 787 aa6.82□□□□□ -1.32
USP28-206ENST00000538224 COLEC11Q9BWP8 271 aa6.82□□□□□ -1.32
USP28-206ENST00000538224 TSSK1BQ9BXA7 367 aa6.82□□□□□ -1.32
USP28-206ENST00000538224 SEZ6LQ9BYH1 1024 aa6.82□□□□□ -1.32
USP28-206ENST00000538224 ADAM33Q9BZ11 813 aa6.82□□□□□ -1.32
USP28-206ENST00000538224 OSBPL2Q9H1P3 480 aa6.82□□□□□ -1.32
USP28-206ENST00000538224 GBA3Q9H227 469 aa6.82□□□□□ -1.32
USP28-206ENST00000538224 PRDM12Q9H4Q4 367 aa6.82□□□□□ -1.32
USP28-206ENST00000538224 FAM96AQ9H5X1 160 aa6.82□□□□□ -1.32
USP28-206ENST00000538224 WDCPQ9H6R7 721 aa6.82□□□□□ -1.32
USP28-206ENST00000538224 CATSPERBQ9H7T0 1116 aa6.82□□□□□ -1.32
USP28-206ENST00000538224 MANSC1Q9H8J5 431 aa6.82□□□□□ -1.32
USP28-206ENST00000538224 ECT2Q9H8V3 914 aa6.82□□□□□ -1.32
USP28-206ENST00000538224 LRRC40Q9H9A6 602 aa6.82□□□□□ -1.32
USP28-206ENST00000538224 WDR6Q9NNW5 1121 aaKnown RBP6.82□□□□□ -1.32
USP28-206ENST00000538224 SAR1AQ9NR31 198 aa6.82□□□□□ -1.32
USP28-206ENST00000538224 ABCC13Q9NSE7 274 aa6.82□□□□□ -1.32
USP28-206ENST00000538224 PIGVQ9NUD9 493 aa6.82□□□□□ -1.32
USP28-206ENST00000538224 MOCS1Q9NZB8 636 aa6.82□□□□□ -1.32
USP28-206ENST00000538224 BFARQ9NZS9 450 aa6.82□□□□□ -1.32
USP28-206ENST00000538224 KLHL8Q9P2G9 620 aaPredicted RBP6.82□□□□□ -1.32
USP28-206ENST00000538224 ADAM28Q9UKQ2 775 aa6.82□□□□□ -1.32
USP28-206ENST00000538224 PCDHB8Q9UN66 801 aa6.82□□□□□ -1.32
USP28-206ENST00000538224 MTO1Q9Y2Z2 717 aaKnown RBP6.82□□□□□ -1.32
USP28-206ENST00000538224 MIA3Q5JRA6 1907 aa6.82□□□□□ -1.32
USP28-206ENST00000538224 MYO18AQ92614 2054 aaKnown RBP6.81□□□□□ -1.32
USP28-206ENST00000538224 TANC1Q9C0D5 1861 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 SYNJ2BP-COX16A0A087WUM0 186 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 MYBPHLA2RUH7 354 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 MOXD2PA6NHM9 499 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 YJEFN3A6XGL0 299 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 VGLL3A8MV65 326 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 FOXO6A8MYZ6 492 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 FAM155AB1AL88 458 aaPredicted RBP6.81□□□□□ -1.32
USP28-206ENST00000538224 HHLA1C9JL84 531 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 E7ENQ6 273 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 NRP1O14786 923 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 AVILO75366 819 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 BEST1O76090 585 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 B3GAT3O94766 335 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 USP1O94782 785 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 UNC5CO95185 931 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 MAP3K6O95382 1288 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 AP2A1O95782 977 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 C1QAP02745 245 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 USP17L7P0C7H9 530 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 SLC2A3P11169 496 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 COL6A1P12109 1028 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 NQO1P15559 274 aaKnown RBP6.81□□□□□ -1.32
USP28-206ENST00000538224 ERCC2P18074 760 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 PSMB4P28070 264 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 HOXD10P28358 340 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 CD52P31358 61 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 HADHAP40939 763 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 ETV4P43268 484 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 SERPINB4P48594 390 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 NPY2RP49146 381 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 FLT3LGP49771 235 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 NRLP54845 237 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 NCALDP61601 193 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 NRG1Q02297 640 aaPredicted RBP6.81□□□□□ -1.32
USP28-206ENST00000538224 MGAT5Q09328 741 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 NIPAL4Q0D2K0 466 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 GALNT2Q10471 571 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 WASHC5Q12768 1159 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 ILF2Q12905 390 aaKnown RBP6.81□□□□□ -1.32
USP28-206ENST00000538224 LPIN1Q14693 890 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 PPP2R5DQ14738 602 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 CRYMQ14894 314 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 NFE2Q16621 373 aaPredicted RBP6.81□□□□□ -1.32
USP28-206ENST00000538224 INSCQ1MX18 579 aa6.81□□□□□ -1.32
USP28-206ENST00000538224 TIGD5Q53EQ6 642 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms