RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 A0A1W2PQC6 194 aa7.46□□□□□ -1.21
MSH6-209ENST00000538136 CCL22O00626 93 aa7.46□□□□□ -1.21
MSH6-209ENST00000538136 CLGNO14967 610 aa7.46□□□□□ -1.21
MSH6-209ENST00000538136 NDUFS2O75306 463 aa7.46□□□□□ -1.21
MSH6-209ENST00000538136 TBX10O75333 385 aa7.46□□□□□ -1.21
MSH6-209ENST00000538136 CNTN5O94779 1100 aa7.46□□□□□ -1.21
MSH6-209ENST00000538136 MTHFRP42898 656 aa7.46□□□□□ -1.21
MSH6-209ENST00000538136 MAPK9P45984 424 aa7.46□□□□□ -1.21
MSH6-209ENST00000538136 DGKGP49619 791 aa7.46□□□□□ -1.21
MSH6-209ENST00000538136 NOMO3P69849 1222 aa7.46□□□□□ -1.21
MSH6-209ENST00000538136 CCDC38Q502W7 563 aa7.46□□□□□ -1.21
MSH6-209ENST00000538136 TXNRD3NBQ6F5E7 133 aa7.46□□□□□ -1.21
MSH6-209ENST00000538136 TRAF7Q6Q0C0 670 aa7.46□□□□□ -1.21
MSH6-209ENST00000538136 LINC01465Q8N7H1 131 aa7.46□□□□□ -1.21
MSH6-209ENST00000538136 TXNDC5Q8NBS9 432 aaKnown RBP7.46□□□□□ -1.21
MSH6-209ENST00000538136 CNPY3Q9BT09 278 aa7.46□□□□□ -1.21
MSH6-209ENST00000538136 MAF1Q9H063 256 aa7.46□□□□□ -1.21
MSH6-209ENST00000538136 LMAN1LQ9HAT1 526 aa7.46□□□□□ -1.21
MSH6-209ENST00000538136 EVLQ9UI08 416 aaPredicted RBP7.46□□□□□ -1.21
MSH6-209ENST00000538136 KIAA1257Q9ULG3 409 aa7.46□□□□□ -1.21
MSH6-209ENST00000538136 ADGRG1Q9Y653 693 aa7.46□□□□□ -1.21
MSH6-209ENST00000538136 BRCA1P38398 1863 aaKnown RBP7.46□□□□□ -1.21
MSH6-209ENST00000538136 TRPM7Q96QT4 1865 aa7.46□□□□□ -1.22
MSH6-209ENST00000538136 RNASEH1O60930 286 aaKnown RBP7.46□□□□□ -1.22
MSH6-209ENST00000538136 PIGRP01833 764 aa7.46□□□□□ -1.22
MSH6-209ENST00000538136 ATP5BP06576 529 aaKnown RBP7.46□□□□□ -1.22
MSH6-209ENST00000538136 PSMC3P17980 439 aa7.46□□□□□ -1.22
MSH6-209ENST00000538136 CYP3A5P20815 502 aa7.46□□□□□ -1.22
MSH6-209ENST00000538136 PROZP22891 400 aa7.46□□□□□ -1.22
MSH6-209ENST00000538136 PMLP29590 882 aa7.46□□□□□ -1.22
MSH6-209ENST00000538136 DAOAP59103 153 aa7.46□□□□□ -1.22
MSH6-209ENST00000538136 DSC1Q08554 894 aa7.46□□□□□ -1.22
MSH6-209ENST00000538136 GRSF1Q12849 480 aaKnown RBP eCLIP7.46□□□□□ -1.22
MSH6-209ENST00000538136 RAB33AQ14088 237 aa7.46□□□□□ -1.22
MSH6-209ENST00000538136 MYBPC2Q14324 1141 aa7.46□□□□□ -1.22
MSH6-209ENST00000538136 TRIM72Q6ZMU5 477 aa7.46□□□□□ -1.22
MSH6-209ENST00000538136 UNC45BQ8IWX7 931 aa7.46□□□□□ -1.22
MSH6-209ENST00000538136 RHOT1Q8IXI2 618 aa7.46□□□□□ -1.22
MSH6-209ENST00000538136 SYCE1Q8N0S2 351 aa7.46□□□□□ -1.22
MSH6-209ENST00000538136 CCDC110Q8TBZ0 833 aa7.46□□□□□ -1.22
MSH6-209ENST00000538136 SMARCD2Q92925 531 aa7.46□□□□□ -1.22
MSH6-209ENST00000538136 FAF2Q96CS3 445 aa7.46□□□□□ -1.22
MSH6-209ENST00000538136 HNRNPABQ99729 332 aaKnown RBP7.46□□□□□ -1.22
MSH6-209ENST00000538136 FUCA2Q9BTY2 467 aa7.46□□□□□ -1.22
MSH6-209ENST00000538136 SNRNP25Q9BV90 132 aaKnown RBP7.46□□□□□ -1.22
MSH6-209ENST00000538136 GPR63Q9BZJ6 419 aa7.46□□□□□ -1.22
MSH6-209ENST00000538136 RAB6BQ9NRW1 208 aa7.46□□□□□ -1.22
MSH6-209ENST00000538136 PCDHGC4Q9Y5F7 938 aa7.46□□□□□ -1.22
MSH6-209ENST00000538136 C2CD4DB7Z1M9 353 aa7.46□□□□□ -1.22
MSH6-209ENST00000538136 DLL1O00548 723 aa7.46□□□□□ -1.22
MSH6-209ENST00000538136 XPO1O14980 1071 aaKnown RBP7.46□□□□□ -1.22
MSH6-209ENST00000538136 INPP4BO15327 924 aa7.46□□□□□ -1.22
MSH6-209ENST00000538136 PDGFBP01127 241 aaPredicted RBP7.46□□□□□ -1.22
MSH6-209ENST00000538136 PAEPP09466 180 aa7.46□□□□□ -1.22
MSH6-209ENST00000538136 LRPAP1P30533 357 aa7.46□□□□□ -1.22
MSH6-209ENST00000538136 GPD2P43304 727 aa7.46□□□□□ -1.22
MSH6-209ENST00000538136 SLC6A11P48066 632 aa7.46□□□□□ -1.22
MSH6-209ENST00000538136 FAM189BP81408 668 aa7.46□□□□□ -1.22
MSH6-209ENST00000538136 CREB5Q02930 508 aa7.46□□□□□ -1.22
MSH6-209ENST00000538136 FAM26DQ5JW98 314 aa7.46□□□□□ -1.22
MSH6-209ENST00000538136 TPGS2Q68CL5 300 aa7.46□□□□□ -1.22
MSH6-209ENST00000538136 C8orf74Q6P047 294 aa7.46□□□□□ -1.22
MSH6-209ENST00000538136 LCLAT1Q6UWP7 414 aa7.46□□□□□ -1.22
MSH6-209ENST00000538136 MFSD7Q6UXD7 560 aa7.46□□□□□ -1.22
MSH6-209ENST00000538136 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.46□□□□□ -1.22
MSH6-209ENST00000538136 Q6ZVU0 165 aa7.46□□□□□ -1.22
MSH6-209ENST00000538136 ARHGAP18Q8N392 663 aa7.46□□□□□ -1.22
MSH6-209ENST00000538136 LPCAT1Q8NF37 534 aa7.46□□□□□ -1.22
MSH6-209ENST00000538136 TRIM58Q8NG06 486 aa7.46□□□□□ -1.22
MSH6-209ENST00000538136 SHKBP1Q8TBC3 707 aa7.46□□□□□ -1.22
MSH6-209ENST00000538136 PIGKQ92643 395 aa7.46□□□□□ -1.22
MSH6-209ENST00000538136 IRF7Q92985 503 aa7.46□□□□□ -1.22
MSH6-209ENST00000538136 CFAP36Q96G28 342 aa7.46□□□□□ -1.22
MSH6-209ENST00000538136 DDX50Q9BQ39 737 aaKnown RBP7.46□□□□□ -1.22
MSH6-209ENST00000538136 TMEM121Q9BTD3 319 aa7.46□□□□□ -1.22
MSH6-209ENST00000538136 VN1R3Q9BXE9 311 aa7.46□□□□□ -1.22
MSH6-209ENST00000538136 ZBP1Q9H171 429 aa7.46□□□□□ -1.22
MSH6-209ENST00000538136 GANQ9H2C0 597 aa7.46□□□□□ -1.22
MSH6-209ENST00000538136 PIGVQ9NUD9 493 aa7.46□□□□□ -1.22
MSH6-209ENST00000538136 PCDHB9Q9Y5E1 797 aa7.46□□□□□ -1.22
MSH6-209ENST00000538136 RNF40O75150 1001 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 ATP1A1P05023 1023 aaKnown RBP7.45□□□□□ -1.22
MSH6-209ENST00000538136 APODP05090 189 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 ERCC2P18074 760 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 NOS2P35228 1153 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 ABCG1P45844 678 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 ARHGEF7Q14155 803 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 CA9Q16790 459 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 CLEC17AQ6ZS10 378 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 RHOT2Q8IXI1 618 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 UBLCP1Q8WVY7 318 aaPredicted RBP7.45□□□□□ -1.22
MSH6-209ENST00000538136 WDR24Q96S15 920 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 PLCD4Q9BRC7 762 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 KLHL3Q9UH77 587 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 CD84Q9UIB8 345 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 COL11A1P12107 1806 aaPredicted RBP7.45□□□□□ -1.22
MSH6-209ENST00000538136 TCF20Q9UGU0 1960 aaKnown RBP7.45□□□□□ -1.22
MSH6-209ENST00000538136 ZNF840PA6NDX5 716 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 RCCD1A6NED2 376 aa7.45□□□□□ -1.22
MSH6-209ENST00000538136 K7ERQ8 282 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms