RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 PMPCBO75439 489 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 ZFXP17010 805 aaPredicted RBP8.95□□□□□ -0.98
UBE3B-208ENST00000538070 GRIK1P39086 918 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 STX3Q13277 289 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 ZBTB6Q15916 424 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 OTOP3Q7RTS5 596 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 CRLF3Q8IUI8 442 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 IPMKQ8NFU5 416 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 MFSD3Q96ES6 412 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 SGF29Q96ES7 293 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 SPATA13Q96N96 652 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 NMUR2Q9GZQ4 415 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 MAF1Q9H063 256 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 ANLNQ9NQW6 1124 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 FAM105AQ9NUU6 356 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 ABT1Q9ULW3 272 aaKnown RBP8.95□□□□□ -0.98
UBE3B-208ENST00000538070 FNDC3AQ9Y2H6 1198 aaKnown RBP8.95□□□□□ -0.98
UBE3B-208ENST00000538070 TTC3P53804 2025 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 ARHGAP42A6NI28 874 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 E7ESA3 106 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 FCHO1O14526 889 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 ZBTB24O43167 697 aaPredicted RBP8.95□□□□□ -0.98
UBE3B-208ENST00000538070 BAG2O95816 211 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 DPYSL2Q16555 572 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 TAZQ16635 292 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 FASTKD1Q53R41 847 aaKnown RBP8.95□□□□□ -0.98
UBE3B-208ENST00000538070 VWA5B1Q5TIE3 1220 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 CLNKQ7Z7G1 428 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 FAM35AQ86V20 835 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 RNF135Q8IUD6 432 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 SPATA22Q8NHS9 363 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 GTF3C2Q8WUA4 911 aaPredicted RBP8.95□□□□□ -0.98
UBE3B-208ENST00000538070 ALKBH8Q96BT7 664 aaKnown RBP8.95□□□□□ -0.98
UBE3B-208ENST00000538070 CLPTM1LQ96KA5 538 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 AGO3Q9H9G7 860 aaKnown RBP8.95□□□□□ -0.98
UBE3B-208ENST00000538070 ABI2Q9NYB9 513 aaPredicted RBP8.95□□□□□ -0.98
UBE3B-208ENST00000538070 NKX1-2Q9UD57 310 aaPredicted RBP8.95□□□□□ -0.98
UBE3B-208ENST00000538070 OR12D3Q9UGF7 316 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 PACSIN3Q9UKS6 424 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 FZD10Q9ULW2 581 aa8.95□□□□□ -0.98
UBE3B-208ENST00000538070 B2RBV5 119 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 NEMP1O14524 444 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 XPO1O14980 1071 aaKnown RBP8.94□□□□□ -0.98
UBE3B-208ENST00000538070 TM9SF1O15321 606 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 ENDOD1O94919 500 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 SLC4A1P02730 911 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 GNAT1P11488 350 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 NOS2P35228 1153 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 PNPLA4P41247 253 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 CRYBB1P53674 252 aaPredicted RBP8.94□□□□□ -0.98
UBE3B-208ENST00000538070 PEX6Q13608 980 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 UBAP2LQ14157 1087 aaKnown RBP8.94□□□□□ -0.98
UBE3B-208ENST00000538070 POU6F1Q14863 301 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 PDK1Q15118 436 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 TIGD5Q53EQ6 642 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 CFAP157Q5JU67 520 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 GDF6Q6KF10 455 aaPredicted RBP8.94□□□□□ -0.98
UBE3B-208ENST00000538070 TEKT4Q8WW24 435 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 FAM136AQ96C01 138 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 CCDC124Q96CT7 223 aaKnown RBP8.94□□□□□ -0.98
UBE3B-208ENST00000538070 FAM161BQ96MY7 647 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 SMOQ99835 787 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 EBF4Q9BQW3 602 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 XPNPEP3Q9NQH7 507 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 MAN1C1Q9NR34 630 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 C20orf96Q9NUD7 363 aaPredicted RBP8.94□□□□□ -0.98
UBE3B-208ENST00000538070 PTPRFP10586 1907 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 ARL5CA6NH57 179 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 PPP1R12AO14974 1030 aaPredicted RBP8.94□□□□□ -0.98
UBE3B-208ENST00000538070 ZMPSTE24O75844 475 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 CSPG5O95196 566 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 LTFP02788 710 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 PDHA1P08559 390 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 ZNF865P0CJ78 1059 aaPredicted RBP8.94□□□□□ -0.98
UBE3B-208ENST00000538070 ELNP15502 786 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 NFKB1P19838 968 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 ADRA1BP35368 520 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 RASA2Q15283 850 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 GALNTL6Q49A17 601 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 ARHGAP17Q68EM7 881 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 PAQR9Q6ZVX9 377 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 TFAP2DQ7Z6R9 452 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 STRA8Q7Z7C7 330 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 CRYBG2Q8N1P7 616 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 ATP2A3Q93084 1043 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 MYLPFQ96A32 169 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 HSFY1Q96LI6 401 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 SPC25Q9HBM1 224 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 CHRAC1Q9NRG0 131 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 IARS2Q9NSE4 1012 aaKnown RBP8.94□□□□□ -0.98
UBE3B-208ENST00000538070 MORF4L1Q9UBU8 362 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 SLC39A10Q9ULF5 831 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 GNEQ9Y223 722 aaKnown RBP8.94□□□□□ -0.98
UBE3B-208ENST00000538070 DNAJC16Q9Y2G8 782 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 MKI67P46013 3256 aaKnown RBP8.94□□□□□ -0.98
UBE3B-208ENST00000538070 GOLGA8QA0A0J9YX86 632 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 TTC24A2A3L6 582 aaPredicted RBP8.94□□□□□ -0.98
UBE3B-208ENST00000538070 GOLGA8OA6NCC3 632 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 GOLGA8NF8WBI6 632 aa8.94□□□□□ -0.98
UBE3B-208ENST00000538070 PTPN9P43378 593 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms