RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 PROSER1Q86XN7 944 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 LXNQ9BS40 222 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 RBAKQ9NYW8 714 aaPredicted RBP5.79□□□□□ -1.48
CSMD1-215ENST00000537824 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.79□□□□□ -1.48
CSMD1-215ENST00000537824 EIF3LQ9Y262 564 aaKnown RBP5.79□□□□□ -1.48
CSMD1-215ENST00000537824 PTK6Q13882 451 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 CLEC16AQ2KHT3 1053 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 AGAP9Q5VTM2 703 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 ZNF605Q86T29 641 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 HIPK1Q86Z02 1210 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 ZDHHC13Q8IUH4 622 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 FAM120BQ96EK7 910 aaKnown RBP5.79□□□□□ -1.48
CSMD1-215ENST00000537824 PGM2Q96G03 612 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 FAM129BQ96TA1 746 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 NLRP1Q9C000 1473 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 TET3O43151 1660 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 USP17L15C9J2P7 530 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 USP17L13C9JLJ4 530 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 USP17L11C9JVI0 530 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 USP17L18D6R9N7 530 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 USP17L22D6RA61 530 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 USP17L17D6RBQ6 530 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 USP17L19D6RCP7 530 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 USP17L20D6RJB6 530 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 APOL3O95236 402 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 RBP3P10745 1247 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 SFNP31947 248 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 USP17L24Q0WX57 530 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 EDRF1Q3B7T1 1238 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 TXNDC11Q6PKC3 985 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 CCNJLQ8IV13 435 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 CNOT7Q9UIV1 285 aaKnown RBP5.79□□□□□ -1.48
CSMD1-215ENST00000537824 RUVBL2Q9Y230 463 aaKnown RBP5.79□□□□□ -1.48
CSMD1-215ENST00000537824 CCNT2O60583 730 aaKnown RBP5.79□□□□□ -1.48
CSMD1-215ENST00000537824 COX4I1P13073 169 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 AZGP1P25311 298 aaKnown RBP5.79□□□□□ -1.48
CSMD1-215ENST00000537824 ALDH4A1P30038 563 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 PACS1Q6VY07 963 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 S100PBPQ96BU1 408 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 SLC4A9Q96Q91 983 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 FAM49AQ9H0Q0 323 aaPredicted RBP5.79□□□□□ -1.48
CSMD1-215ENST00000537824 FAM25EA8MYX2 175 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 TIMM44O43615 452 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 NRP2O60462 931 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 PMPCBO75439 489 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 ATP5BP06576 529 aaKnown RBP5.79□□□□□ -1.48
CSMD1-215ENST00000537824 MSH3P20585 1137 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 ADRA1DP25100 572 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 HSPBAP1Q96EW2 488 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 NAGPAQ9UK23 515 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 CAPN8A6NHC0 703 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 MYL12BO14950 172 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 UBDO15205 165 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 PCCAP05165 728 aaPredicted RBP5.78□□□□□ -1.48
CSMD1-215ENST00000537824 PDGFRAP16234 1089 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 GRIA3P42263 894 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 NEK3P51956 506 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 IL18R1Q13478 541 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 TBC1D21Q8IYX1 336 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 DCUN1D1Q96GG9 259 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 GSDMCQ9BYG8 508 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 KCND1Q9NSA2 647 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 RGS17Q9UGC6 210 aaPredicted RBP5.78□□□□□ -1.48
CSMD1-215ENST00000537824 ATP10BO94823 1461 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 SLCO1B7G3V0H7 640 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 TFPTP0C1Z6 253 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 GMFBP60983 142 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 TSGA10IPQ3SY00 556 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 CDKAL1Q5VV42 579 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.78□□□□□ -1.48
CSMD1-215ENST00000537824 NSUN6Q8TEA1 469 aaKnown RBP5.78□□□□□ -1.48
CSMD1-215ENST00000537824 SH3KBP1Q96B97 665 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 FRMD8Q9BZ67 464 aaPredicted RBP5.78□□□□□ -1.48
CSMD1-215ENST00000537824 IRF2BPLQ9H1B7 796 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 ETNK2Q9NVF9 386 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 PRKAG3Q9UGI9 489 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 MRPS7Q9Y2R9 242 aaKnown RBP5.78□□□□□ -1.48
CSMD1-215ENST00000537824 DHRS12A0PJE2 317 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 A8MV72 311 aaPredicted RBP5.78□□□□□ -1.48
CSMD1-215ENST00000537824 TDP2O95551 362 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 FAM86B2P0C5J1 330 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 CCNG1P51959 295 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 TRIM32Q13049 653 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 ALX1Q15699 326 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 PLA2G4EQ3MJ16 856 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 PTPN20Q4JDL3 420 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 ZNF276Q8N554 614 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 PDPRQ8NCN5 879 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 PIK3C3Q8NEB9 887 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 DCAF4Q8WV16 495 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 ZNF285Q96NJ3 590 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 REEP1Q9H902 201 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 S100A14Q9HCY8 104 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 WASF2Q9Y6W5 498 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 MAP3K15Q6ZN16 1313 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 KIAA0556O60303 1618 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 ARHGEF33A8MVX0 844 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 DNM1LO00429 736 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 PDXKO00764 312 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 CYP2C8P10632 490 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms