RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 UBQLN1Q9UMX0 589 aaKnown RBP14.73□□□□□ -0.05
USP44-203ENST00000537435 KPNA7A9QM74 516 aa14.72□□□□□ -0.05
USP44-203ENST00000537435 OPHN1O60890 802 aa14.72□□□□□ -0.05
USP44-203ENST00000537435 CIB2O75838 187 aa14.72□□□□□ -0.05
USP44-203ENST00000537435 STK10O94804 968 aaKnown RBP14.72□□□□□ -0.05
USP44-203ENST00000537435 ITGA2BP08514 1039 aa14.72□□□□□ -0.05
USP44-203ENST00000537435 TKTP29401 623 aaKnown RBP14.72□□□□□ -0.05
USP44-203ENST00000537435 ERFP50548 548 aa14.72□□□□□ -0.05
USP44-203ENST00000537435 PDE1BQ01064 536 aa14.72□□□□□ -0.05
USP44-203ENST00000537435 PCLAFQ15004 111 aa14.72□□□□□ -0.05
USP44-203ENST00000537435 SLC25A52Q3SY17 297 aa14.72□□□□□ -0.05
USP44-203ENST00000537435 NOTUMQ6P988 496 aa14.72□□□□□ -0.05
USP44-203ENST00000537435 ALKAL1Q6UXT8 129 aa14.72□□□□□ -0.05
USP44-203ENST00000537435 RIPOR1Q6ZS17 1223 aa14.72□□□□□ -0.05
USP44-203ENST00000537435 CCNJLQ8IV13 435 aa14.72□□□□□ -0.05
USP44-203ENST00000537435 CCNYQ8ND76 341 aa14.72□□□□□ -0.05
USP44-203ENST00000537435 RNF139Q8WU17 664 aa14.72□□□□□ -0.05
USP44-203ENST00000537435 PANX3Q96QZ0 392 aa14.72□□□□□ -0.05
USP44-203ENST00000537435 OSMRQ99650 979 aa14.72□□□□□ -0.05
USP44-203ENST00000537435 SGIP1Q9BQI5 828 aa14.72□□□□□ -0.05
USP44-203ENST00000537435 KATNBL1Q9H079 304 aa14.72□□□□□ -0.05
USP44-203ENST00000537435 EIF2B3Q9NR50 452 aaKnown RBP14.72□□□□□ -0.05
USP44-203ENST00000537435 LRCH1Q9Y2L9 728 aa14.72□□□□□ -0.05
USP44-203ENST00000537435 PIRO00625 290 aa14.72□□□□□ -0.05
USP44-203ENST00000537435 MMP3P08254 477 aa14.72□□□□□ -0.05
USP44-203ENST00000537435 ADIGQ0VDE8 80 aa14.72□□□□□ -0.05
USP44-203ENST00000537435 TUBB3Q13509 450 aa14.72□□□□□ -0.05
USP44-203ENST00000537435 ZRSR2Q15696 482 aaKnown RBP14.72□□□□□ -0.05
USP44-203ENST00000537435 DCAF6Q58WW2 860 aa14.72□□□□□ -0.05
USP44-203ENST00000537435 C6orf163Q5TEZ5 329 aa14.72□□□□□ -0.05
USP44-203ENST00000537435 CES3Q6UWW8 571 aa14.72□□□□□ -0.05
USP44-203ENST00000537435 PIGZQ86VD9 579 aa14.72□□□□□ -0.05
USP44-203ENST00000537435 RASSF3Q86WH2 238 aa14.72□□□□□ -0.05
USP44-203ENST00000537435 PPP1R13LQ8WUF5 828 aa14.72□□□□□ -0.05
USP44-203ENST00000537435 PGBD4Q96DM1 585 aa14.72□□□□□ -0.05
USP44-203ENST00000537435 SIKE1Q9BRV8 207 aa14.72□□□□□ -0.05
USP44-203ENST00000537435 KLK14Q9P0G3 267 aa14.72□□□□□ -0.05
USP44-203ENST00000537435 DCDC2Q9UHG0 476 aa14.72□□□□□ -0.05
USP44-203ENST00000537435 SLC7A8Q9UHI5 535 aa14.72□□□□□ -0.05
USP44-203ENST00000537435 MEI4A8MW99 385 aa14.71□□□□□ -0.05
USP44-203ENST00000537435 CREB3O43889 395 aa14.71□□□□□ -0.05
USP44-203ENST00000537435 GPR32O75388 356 aa14.71□□□□□ -0.05
USP44-203ENST00000537435 SKIP12755 728 aa14.71□□□□□ -0.05
USP44-203ENST00000537435 AOC1P19801 751 aa14.71□□□□□ -0.05
USP44-203ENST00000537435 GLUD2P49448 558 aa14.71□□□□□ -0.05
USP44-203ENST00000537435 TUBP50607 506 aa14.71□□□□□ -0.05
USP44-203ENST00000537435 TRMT5Q32P41 509 aaKnown RBP14.71□□□□□ -0.05
USP44-203ENST00000537435 PPM1JQ5JR12 505 aa14.71□□□□□ -0.05
USP44-203ENST00000537435 OTUD1Q5VV17 481 aaPredicted RBP14.71□□□□□ -0.05
USP44-203ENST00000537435 IRGCQ6NXR0 463 aa14.71□□□□□ -0.05
USP44-203ENST00000537435 C10orf107Q8IVU9 208 aa14.71□□□□□ -0.05
USP44-203ENST00000537435 NME8Q8N427 588 aa14.71□□□□□ -0.05
USP44-203ENST00000537435 UCMAQ8WVF2 138 aa14.71□□□□□ -0.05
USP44-203ENST00000537435 PRDM12Q9H4Q4 367 aa14.71□□□□□ -0.05
USP44-203ENST00000537435 SORCS3Q9UPU3 1222 aa14.71□□□□□ -0.05
USP44-203ENST00000537435 XPO1O14980 1071 aaKnown RBP14.71□□□□□ -0.05
USP44-203ENST00000537435 SNAI1O95863 264 aaPredicted RBP14.71□□□□□ -0.05
USP44-203ENST00000537435 SERPINE1P05121 402 aa14.71□□□□□ -0.05
USP44-203ENST00000537435 PRKCGP05129 697 aa14.71□□□□□ -0.05
USP44-203ENST00000537435 C6orf222P0C671 652 aaPredicted RBP14.71□□□□□ -0.05
USP44-203ENST00000537435 ERVK-10P10266 1014 aa14.71□□□□□ -0.05
USP44-203ENST00000537435 GJA5P36382 358 aa14.71□□□□□ -0.05
USP44-203ENST00000537435 MLH1P40692 756 aa14.71□□□□□ -0.05
USP44-203ENST00000537435 NAB1Q13506 487 aa14.71□□□□□ -0.05
USP44-203ENST00000537435 TMEM154Q6P9G4 183 aa14.71□□□□□ -0.05
USP44-203ENST00000537435 ATG14Q6ZNE5 492 aa14.71□□□□□ -0.05
USP44-203ENST00000537435 TP53INP2Q8IXH6 220 aa14.71□□□□□ -0.05
USP44-203ENST00000537435 ZNF567Q8N184 647 aa14.71□□□□□ -0.05
USP44-203ENST00000537435 APPL2Q8NEU8 664 aa14.71□□□□□ -0.05
USP44-203ENST00000537435 GPRC5AQ8NFJ5 357 aa14.71□□□□□ -0.05
USP44-203ENST00000537435 PGLYRP2Q96PD5 576 aa14.71□□□□□ -0.05
USP44-203ENST00000537435 FERMT1Q9BQL6 677 aa14.71□□□□□ -0.05
USP44-203ENST00000537435 SYT15Q9BQS2 421 aa14.71□□□□□ -0.05
USP44-203ENST00000537435 C1orf21Q9H246 121 aa14.71□□□□□ -0.05
USP44-203ENST00000537435 GOLGA2P5Q9HBQ8 144 aa14.71□□□□□ -0.05
USP44-203ENST00000537435 KRT82Q9NSB4 513 aa14.71□□□□□ -0.05
USP44-203ENST00000537435 TMEM216Q9P0N5 145 aa14.71□□□□□ -0.05
USP44-203ENST00000537435 TXNDC16Q9P2K2 825 aa14.71□□□□□ -0.05
USP44-203ENST00000537435 ANGPTL2Q9UKU9 493 aa14.71□□□□□ -0.05
USP44-203ENST00000537435 SMIM28A0A1B0GU29 152 aa14.7□□□□□ -0.06
USP44-203ENST00000537435 MAP3K7O43318 606 aa14.7□□□□□ -0.06
USP44-203ENST00000537435 DAB1O75553 588 aa14.7□□□□□ -0.06
USP44-203ENST00000537435 CD4P01730 458 aa14.7□□□□□ -0.06
USP44-203ENST00000537435 PROCP04070 461 aa14.7□□□□□ -0.06
USP44-203ENST00000537435 SMPD1P17405 629 aa14.7□□□□□ -0.06
USP44-203ENST00000537435 TYK2P29597 1187 aa14.7□□□□□ -0.06
USP44-203ENST00000537435 GMPRP36959 345 aa14.7□□□□□ -0.06
USP44-203ENST00000537435 ACTR3P61158 418 aa14.7□□□□□ -0.06
USP44-203ENST00000537435 OLIG2Q13516 323 aa14.7□□□□□ -0.06
USP44-203ENST00000537435 PDK1Q15118 436 aa14.7□□□□□ -0.06
USP44-203ENST00000537435 RABGAP1LQ5R372 815 aa14.7□□□□□ -0.06
USP44-203ENST00000537435 C1orf146Q5VVC0 180 aa14.7□□□□□ -0.06
USP44-203ENST00000537435 PSTKQ8IV42 348 aaKnown RBP14.7□□□□□ -0.06
USP44-203ENST00000537435 OR6J1Q8NGC5 347 aa14.7□□□□□ -0.06
USP44-203ENST00000537435 ZNF560Q96MR9 790 aa14.7□□□□□ -0.06
USP44-203ENST00000537435 NAT9Q9BTE0 207 aa14.7□□□□□ -0.06
USP44-203ENST00000537435 SLC24A3Q9HC58 644 aa14.7□□□□□ -0.06
USP44-203ENST00000537435 SOX13Q9UN79 622 aa14.7□□□□□ -0.06
USP44-203ENST00000537435 APOBEC2Q9Y235 224 aaKnown RBP14.7□□□□□ -0.06
USP44-203ENST00000537435 E2F8A0AVK6 867 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms