RNA–Protein interactions for RNA: ENST00000537230.2

TRIM25-202, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 2,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-202ENST00000537230 OXNAD1Q96HP4 312 aaPredicted RBP13.26□□□□□ -0.29
TRIM25-202ENST00000537230 NSL1Q96IY1 281 aa13.26□□□□□ -0.29
TRIM25-202ENST00000537230 HSFY1Q96LI6 401 aa13.26□□□□□ -0.29
TRIM25-202ENST00000537230 ZNF560Q96MR9 790 aa13.26□□□□□ -0.29
TRIM25-202ENST00000537230 PIGVQ9NUD9 493 aa13.26□□□□□ -0.29
TRIM25-202ENST00000537230 GTF2IRD1Q9UHL9 959 aa13.26□□□□□ -0.29
TRIM25-202ENST00000537230 SHROOM3Q8TF72 1996 aa13.25□□□□□ -0.29
TRIM25-202ENST00000537230 MYADML2A6NDP7 307 aa13.25□□□□□ -0.29
TRIM25-202ENST00000537230 XPO1O14980 1071 aaKnown RBP13.25□□□□□ -0.29
TRIM25-202ENST00000537230 CREB3O43889 395 aa13.25□□□□□ -0.29
TRIM25-202ENST00000537230 SPAG6O75602 509 aa13.25□□□□□ -0.29
TRIM25-202ENST00000537230 SERPINB4P48594 390 aa13.25□□□□□ -0.29
TRIM25-202ENST00000537230 MAP3K7CLP57077 242 aa13.25□□□□□ -0.29
TRIM25-202ENST00000537230 SARNPP82979 210 aaKnown RBP13.25□□□□□ -0.29
TRIM25-202ENST00000537230 MAP2K5Q13163 448 aa13.25□□□□□ -0.29
TRIM25-202ENST00000537230 MDH1BQ5I0G3 518 aa13.25□□□□□ -0.29
TRIM25-202ENST00000537230 TTC39BQ5VTQ0 682 aaPredicted RBP13.25□□□□□ -0.29
TRIM25-202ENST00000537230 GPRIN1Q7Z2K8 1008 aa13.25□□□□□ -0.29
TRIM25-202ENST00000537230 PDCD7Q8N8D1 485 aaKnown RBP13.25□□□□□ -0.29
TRIM25-202ENST00000537230 PHC3Q8NDX5 983 aa13.25□□□□□ -0.29
TRIM25-202ENST00000537230 MCUQ8NE86 351 aa13.25□□□□□ -0.29
TRIM25-202ENST00000537230 GSTCDQ8NEC7 633 aa13.25□□□□□ -0.29
TRIM25-202ENST00000537230 KCNK16Q96T55 309 aa13.25□□□□□ -0.29
TRIM25-202ENST00000537230 EBNA1BP2Q99848 306 aaKnown RBP13.25□□□□□ -0.29
TRIM25-202ENST00000537230 DUSP16Q9BY84 665 aa13.25□□□□□ -0.29
TRIM25-202ENST00000537230 TTC3P53804 2025 aa13.25□□□□□ -0.29
TRIM25-202ENST00000537230 TSC2P49815 1807 aa13.25□□□□□ -0.29
TRIM25-202ENST00000537230 WDR27A2RRH5 827 aa13.25□□□□□ -0.29
TRIM25-202ENST00000537230 COPEO14579 308 aa13.25□□□□□ -0.29
TRIM25-202ENST00000537230 DGKIO75912 1065 aa13.25□□□□□ -0.29
TRIM25-202ENST00000537230 FYNP06241 537 aa13.25□□□□□ -0.29
TRIM25-202ENST00000537230 FESP07332 822 aa13.25□□□□□ -0.29
TRIM25-202ENST00000537230 GNAT1P11488 350 aa13.25□□□□□ -0.29
TRIM25-202ENST00000537230 DESP17661 470 aa13.25□□□□□ -0.29
TRIM25-202ENST00000537230 SNX16P57768 344 aa13.25□□□□□ -0.29
TRIM25-202ENST00000537230 CDC42EP1Q00587 391 aa13.25□□□□□ -0.29
TRIM25-202ENST00000537230 PRKD1Q15139 912 aaPredicted RBP13.25□□□□□ -0.29
TRIM25-202ENST00000537230 BSPRYQ5W0U4 402 aa13.25□□□□□ -0.29
TRIM25-202ENST00000537230 STRADAQ7RTN6 431 aa13.25□□□□□ -0.29
TRIM25-202ENST00000537230 LPPQ93052 612 aa13.25□□□□□ -0.29
TRIM25-202ENST00000537230 SKA1Q96BD8 255 aa13.25□□□□□ -0.29
TRIM25-202ENST00000537230 HNRNPABQ99729 332 aaKnown RBP13.25□□□□□ -0.29
TRIM25-202ENST00000537230 CCDC195A0A1B0GUA6 201 aa13.24□□□□□ -0.29
TRIM25-202ENST00000537230 ZNF487B1APH4 448 aa13.24□□□□□ -0.29
TRIM25-202ENST00000537230 M0QYT0 321 aa13.24□□□□□ -0.29
TRIM25-202ENST00000537230 HNRNPCL1O60812 293 aaKnown RBP13.24□□□□□ -0.29
TRIM25-202ENST00000537230 SNRPAP09012 282 aaKnown RBP13.24□□□□□ -0.29
TRIM25-202ENST00000537230 DLDP09622 509 aaKnown RBP13.24□□□□□ -0.29
TRIM25-202ENST00000537230 MYL2P10916 166 aa13.24□□□□□ -0.29
TRIM25-202ENST00000537230 ESRRAP11474 423 aaPredicted RBP13.24□□□□□ -0.29
TRIM25-202ENST00000537230 NPR3P17342 541 aa13.24□□□□□ -0.29
TRIM25-202ENST00000537230 PTPN1P18031 435 aaKnown RBP13.24□□□□□ -0.29
TRIM25-202ENST00000537230 NR2C2P49116 596 aa13.24□□□□□ -0.29
TRIM25-202ENST00000537230 CDK16Q00536 496 aa13.24□□□□□ -0.29
TRIM25-202ENST00000537230 AP1B1Q10567 949 aa13.24□□□□□ -0.29
TRIM25-202ENST00000537230 CBLBQ13191 982 aa13.24□□□□□ -0.29
TRIM25-202ENST00000537230 SEMA5AQ13591 1074 aa13.24□□□□□ -0.29
TRIM25-202ENST00000537230 SV2CQ496J9 727 aa13.24□□□□□ -0.29
TRIM25-202ENST00000537230 SLC30A9Q6PML9 568 aa13.24□□□□□ -0.29
TRIM25-202ENST00000537230 LRRC74BQ6ZQY2 392 aa13.24□□□□□ -0.29
TRIM25-202ENST00000537230 ARCQ7LC44 396 aa13.24□□□□□ -0.29
TRIM25-202ENST00000537230 C3orf58Q8NDZ4 430 aa13.24□□□□□ -0.29
TRIM25-202ENST00000537230 RNF139Q8WU17 664 aa13.24□□□□□ -0.29
TRIM25-202ENST00000537230 TFB1MQ8WVM0 346 aaKnown RBP13.24□□□□□ -0.29
TRIM25-202ENST00000537230 WNT8BQ93098 351 aa13.24□□□□□ -0.29
TRIM25-202ENST00000537230 SH3GL3Q99963 347 aa13.24□□□□□ -0.29
TRIM25-202ENST00000537230 PAAF1Q9BRP4 392 aa13.24□□□□□ -0.29
TRIM25-202ENST00000537230 RHOBTB2Q9BYZ6 727 aa13.24□□□□□ -0.29
TRIM25-202ENST00000537230 PPP1R12CQ9BZL4 782 aa13.24□□□□□ -0.29
TRIM25-202ENST00000537230 CRTAC1Q9NQ79 661 aa13.24□□□□□ -0.29
TRIM25-202ENST00000537230 SEPT10Q9P0V9 454 aa13.24□□□□□ -0.29
TRIM25-202ENST00000537230 WASF2Q9Y6W5 498 aa13.24□□□□□ -0.29
TRIM25-202ENST00000537230 FAM237BA0A1B0GVD1 139 aa13.24□□□□□ -0.29
TRIM25-202ENST00000537230 PSMG1O95456 288 aa13.24□□□□□ -0.29
TRIM25-202ENST00000537230 F7P08709 466 aaPredicted RBP13.24□□□□□ -0.29
TRIM25-202ENST00000537230 AXLP30530 894 aa13.24□□□□□ -0.29
TRIM25-202ENST00000537230 GMPRP36959 345 aa13.24□□□□□ -0.29
TRIM25-202ENST00000537230 ARL4AP40617 200 aa13.24□□□□□ -0.29
TRIM25-202ENST00000537230 LBRQ14739 615 aaKnown RBP13.24□□□□□ -0.29
TRIM25-202ENST00000537230 EFHC1Q5JVL4 640 aa13.24□□□□□ -0.29
TRIM25-202ENST00000537230 ALYREFQ86V81 257 aaKnown RBP13.24□□□□□ -0.29
TRIM25-202ENST00000537230 GSDMBQ8TAX9 411 aa13.24□□□□□ -0.29
TRIM25-202ENST00000537230 P2RY11Q96G91 374 aa13.24□□□□□ -0.29
TRIM25-202ENST00000537230 TNIP3Q96KP6 325 aa13.24□□□□□ -0.29
TRIM25-202ENST00000537230 NMUR2Q9GZQ4 415 aa13.24□□□□□ -0.29
TRIM25-202ENST00000537230 PAPOLBQ9NRJ5 636 aaKnown RBP13.24□□□□□ -0.29
TRIM25-202ENST00000537230 PCMTD2Q9NV79 361 aa13.24□□□□□ -0.29
TRIM25-202ENST00000537230 LRCH1Q9Y2L9 728 aa13.24□□□□□ -0.29
TRIM25-202ENST00000537230 FAM159BA6NKW6 160 aa13.23□□□□□ -0.29
TRIM25-202ENST00000537230 YJEFN3A6XGL0 299 aa13.23□□□□□ -0.29
TRIM25-202ENST00000537230 KCNK1O00180 336 aa13.23□□□□□ -0.29
TRIM25-202ENST00000537230 RNF103O00237 685 aa13.23□□□□□ -0.29
TRIM25-202ENST00000537230 KRT37O76014 449 aa13.23□□□□□ -0.29
TRIM25-202ENST00000537230 TPSB2P20231 275 aa13.23□□□□□ -0.29
TRIM25-202ENST00000537230 MLH1P40692 756 aa13.23□□□□□ -0.29
TRIM25-202ENST00000537230 PNPLA4P41247 253 aa13.23□□□□□ -0.29
TRIM25-202ENST00000537230 ACADSBP45954 432 aa13.23□□□□□ -0.29
TRIM25-202ENST00000537230 CRYBB1P53674 252 aaPredicted RBP13.23□□□□□ -0.29
TRIM25-202ENST00000537230 SESN2P58004 480 aaPredicted RBP13.23□□□□□ -0.29
TRIM25-202ENST00000537230 SLC34A1Q06495 639 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms