RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 MSTO1Q9BUK6 570 aa9.96□□□□□ -0.82
CPSF7-217ENST00000537162 ZNF518BQ9C0D4 1074 aa9.96□□□□□ -0.82
CPSF7-217ENST00000537162 NACA2Q9H009 215 aa9.96□□□□□ -0.82
CPSF7-217ENST00000537162 USP29Q9HBJ7 922 aa9.96□□□□□ -0.82
CPSF7-217ENST00000537162 ZSWIM6Q9HCJ5 1215 aa9.96□□□□□ -0.82
CPSF7-217ENST00000537162 EME2A4GXA9 379 aaPredicted RBP9.95□□□□□ -0.82
CPSF7-217ENST00000537162 TISP43B9A030 160 aa9.95□□□□□ -0.82
CPSF7-217ENST00000537162 BHMG1C9JSJ3 638 aaPredicted RBP9.95□□□□□ -0.82
CPSF7-217ENST00000537162 MUSKO15146 869 aa9.95□□□□□ -0.82
CPSF7-217ENST00000537162 NKX2-8O15522 239 aa9.95□□□□□ -0.82
CPSF7-217ENST00000537162 DUX1O43812 170 aa9.95□□□□□ -0.82
CPSF7-217ENST00000537162 TLR5O60602 858 aa9.95□□□□□ -0.82
CPSF7-217ENST00000537162 ALPPL2P10696 532 aa9.95□□□□□ -0.82
CPSF7-217ENST00000537162 LIFP15018 202 aa9.95□□□□□ -0.82
CPSF7-217ENST00000537162 LHX1P48742 406 aa9.95□□□□□ -0.82
CPSF7-217ENST00000537162 LIG4P49917 911 aa9.95□□□□□ -0.82
CPSF7-217ENST00000537162 TUBP50607 506 aa9.95□□□□□ -0.82
CPSF7-217ENST00000537162 ARID5AQ03989 594 aa9.95□□□□□ -0.82
CPSF7-217ENST00000537162 KYAT1Q16773 422 aa9.95□□□□□ -0.82
CPSF7-217ENST00000537162 ZXDCQ2QGD7 858 aaPredicted RBP9.95□□□□□ -0.82
CPSF7-217ENST00000537162 RINT1Q6NUQ1 792 aa9.95□□□□□ -0.82
CPSF7-217ENST00000537162 C1orf186Q6ZWK4 172 aa9.95□□□□□ -0.82
CPSF7-217ENST00000537162 XYLT1Q86Y38 959 aa9.95□□□□□ -0.82
CPSF7-217ENST00000537162 NUP93Q8N1F7 819 aa9.95□□□□□ -0.82
CPSF7-217ENST00000537162 EFCAB3Q8N7B9 438 aa9.95□□□□□ -0.82
CPSF7-217ENST00000537162 C1orf127Q8N9H9 656 aa9.95□□□□□ -0.82
CPSF7-217ENST00000537162 TEX19Q8NA77 164 aa9.95□□□□□ -0.82
CPSF7-217ENST00000537162 OVCA2Q8WZ82 227 aa9.95□□□□□ -0.82
CPSF7-217ENST00000537162 USP7Q93009 1102 aa9.95□□□□□ -0.82
CPSF7-217ENST00000537162 MYOCQ99972 504 aa9.95□□□□□ -0.82
CPSF7-217ENST00000537162 ASB7Q9H672 318 aa9.95□□□□□ -0.82
CPSF7-217ENST00000537162 ANO2Q9NQ90 1003 aa9.95□□□□□ -0.82
CPSF7-217ENST00000537162 KLHL11Q9NVR0 708 aa9.95□□□□□ -0.82
CPSF7-217ENST00000537162 OSER1Q9NX31 292 aa9.95□□□□□ -0.82
CPSF7-217ENST00000537162 GDAP2Q9NXN4 497 aa9.95□□□□□ -0.82
CPSF7-217ENST00000537162 LSM7Q9UK45 103 aaKnown RBP9.95□□□□□ -0.82
CPSF7-217ENST00000537162 NUDT5Q9UKK9 219 aa9.95□□□□□ -0.82
CPSF7-217ENST00000537162 CDH9Q9ULB4 789 aa9.95□□□□□ -0.82
CPSF7-217ENST00000537162 PPM1HQ9ULR3 514 aa9.95□□□□□ -0.82
CPSF7-217ENST00000537162 KIAA1024Q9UPX6 916 aa9.95□□□□□ -0.82
CPSF7-217ENST00000537162 CCDC168Q8NDH2 2452 aa9.94□□□□□ -0.82
CPSF7-217ENST00000537162 TTLL8A6PVC2 850 aa9.94□□□□□ -0.82
CPSF7-217ENST00000537162 TCP11X1B4DZS4 312 aa9.94□□□□□ -0.82
CPSF7-217ENST00000537162 NTN3O00634 580 aaPredicted RBP9.94□□□□□ -0.82
CPSF7-217ENST00000537162 SFSWAPQ12872 951 aaKnown RBP9.94□□□□□ -0.82
CPSF7-217ENST00000537162 SPIDRQ14159 915 aa9.94□□□□□ -0.82
CPSF7-217ENST00000537162 CST6Q15828 149 aa9.94□□□□□ -0.82
CPSF7-217ENST00000537162 CRELD2Q6UXH1 353 aaPredicted RBP9.94□□□□□ -0.82
CPSF7-217ENST00000537162 HS2ST1Q7LGA3 356 aa9.94□□□□□ -0.82
CPSF7-217ENST00000537162 TOP6BLQ8N6T0 577 aa9.94□□□□□ -0.82
CPSF7-217ENST00000537162 OR6B3Q8NGW1 331 aa9.94□□□□□ -0.82
CPSF7-217ENST00000537162 OR14C36Q8NHC7 312 aa9.94□□□□□ -0.82
CPSF7-217ENST00000537162 MYCBPAPQ8TBZ2 947 aa9.94□□□□□ -0.82
CPSF7-217ENST00000537162 GOLGA1Q92805 767 aa9.94□□□□□ -0.82
CPSF7-217ENST00000537162 KLHDC7BQ96G42 594 aa9.94□□□□□ -0.82
CPSF7-217ENST00000537162 PPP1R13BQ96KQ4 1090 aa9.94□□□□□ -0.82
CPSF7-217ENST00000537162 LURAP1Q96LR2 239 aa9.94□□□□□ -0.82
CPSF7-217ENST00000537162 OMDQ99983 421 aa9.94□□□□□ -0.82
CPSF7-217ENST00000537162 ESYT1Q9BSJ8 1104 aa9.94□□□□□ -0.82
CPSF7-217ENST00000537162 FBRSQ9HAH7 460 aa9.94□□□□□ -0.82
CPSF7-217ENST00000537162 PRDM8Q9NQV8 689 aa9.94□□□□□ -0.82
CPSF7-217ENST00000537162 DDX19AQ9NUU7 478 aaKnown RBP9.94□□□□□ -0.82
CPSF7-217ENST00000537162 KCND3Q9UK17 655 aa9.94□□□□□ -0.82
CPSF7-217ENST00000537162 PCDHB11Q9Y5F2 797 aa9.94□□□□□ -0.82
CPSF7-217ENST00000537162 PRRC2CQ9Y520 2896 aaKnown RBP9.94□□□□□ -0.82
CPSF7-217ENST00000537162 TNRC6AQ8NDV7 1962 aaKnown RBP9.94□□□□□ -0.82
CPSF7-217ENST00000537162 TBC1D3DA0A087WVF3 549 aa9.93□□□□□ -0.82
CPSF7-217ENST00000537162 TBC1D3IA0A087WXS9 549 aa9.93□□□□□ -0.82
CPSF7-217ENST00000537162 TBC1D3EA0A087X179 549 aa9.93□□□□□ -0.82
CPSF7-217ENST00000537162 TBC1D3KA0A087X1G2 549 aa9.93□□□□□ -0.82
CPSF7-217ENST00000537162 TBC1D3FA6NER0 549 aaPredicted RBP9.93□□□□□ -0.82
CPSF7-217ENST00000537162 TBC1D3LB9A6J9 549 aa9.93□□□□□ -0.82
CPSF7-217ENST00000537162 ANKRD63C9JTQ0 380 aa9.93□□□□□ -0.82
CPSF7-217ENST00000537162 HNRNPDLO14979 420 aaKnown RBP9.93□□□□□ -0.82
CPSF7-217ENST00000537162 TIMM44O43615 452 aa9.93□□□□□ -0.82
CPSF7-217ENST00000537162 SIN3BO75182 1162 aa9.93□□□□□ -0.82
CPSF7-217ENST00000537162 STC2O76061 302 aa9.93□□□□□ -0.82
CPSF7-217ENST00000537162 TBC1D3HP0C7X1 549 aa9.93□□□□□ -0.82
CPSF7-217ENST00000537162 JMJD7P0C870 316 aa9.93□□□□□ -0.82
CPSF7-217ENST00000537162 PRKAR1AP10644 381 aa9.93□□□□□ -0.82
CPSF7-217ENST00000537162 PLS3P13797 630 aa9.93□□□□□ -0.82
CPSF7-217ENST00000537162 HLA-FP30511 346 aa9.93□□□□□ -0.82
CPSF7-217ENST00000537162 CCT6AP40227 531 aaKnown RBP9.93□□□□□ -0.82
CPSF7-217ENST00000537162 PNPLA4P41247 253 aa9.93□□□□□ -0.82
CPSF7-217ENST00000537162 FXR2P51116 673 aaKnown RBP eCLIP9.93□□□□□ -0.82
CPSF7-217ENST00000537162 METAP1P53582 386 aa9.93□□□□□ -0.82
CPSF7-217ENST00000537162 STAT4Q14765 748 aa9.93□□□□□ -0.82
CPSF7-217ENST00000537162 DEFB133Q30KQ1 61 aa9.93□□□□□ -0.82
CPSF7-217ENST00000537162 TSGA10IPQ3SY00 556 aa9.93□□□□□ -0.82
CPSF7-217ENST00000537162 PRR30Q53SZ7 412 aaPredicted RBP9.93□□□□□ -0.82
CPSF7-217ENST00000537162 NUGGCQ68CJ6 796 aa9.93□□□□□ -0.82
CPSF7-217ENST00000537162 TBC1D3GQ6DHY5 549 aa9.93□□□□□ -0.82
CPSF7-217ENST00000537162 TBC1D3CQ6IPX1 549 aa9.93□□□□□ -0.82
CPSF7-217ENST00000537162 ZCCHC8Q6NZY4 707 aaKnown RBP9.93□□□□□ -0.82
CPSF7-217ENST00000537162 KCNK18Q7Z418 384 aa9.93□□□□□ -0.82
CPSF7-217ENST00000537162 LIMS2Q7Z4I7 341 aa9.93□□□□□ -0.82
CPSF7-217ENST00000537162 DSG4Q86SJ6 1040 aa9.93□□□□□ -0.82
CPSF7-217ENST00000537162 ADIPOR2Q86V24 386 aa9.93□□□□□ -0.82
CPSF7-217ENST00000537162 MMAAQ8IVH4 418 aaKnown RBP9.93□□□□□ -0.82
CPSF7-217ENST00000537162 TBC1D3Q8IZP1 549 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms