RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 ANKRD16Q6P6B7 361 aa6.36□□□□□ -1.39
CLIP1-207ENST00000536634 ZNF788Q6ZQV5 615 aa6.36□□□□□ -1.39
CLIP1-207ENST00000536634 IZUMO1Q8IYV9 350 aa6.36□□□□□ -1.39
CLIP1-207ENST00000536634 LRRC71Q8N4P6 559 aa6.36□□□□□ -1.39
CLIP1-207ENST00000536634 DNAJB14Q8TBM8 379 aa6.36□□□□□ -1.39
CLIP1-207ENST00000536634 XPNPEP3Q9NQH7 507 aa6.36□□□□□ -1.39
CLIP1-207ENST00000536634 MTMR10Q9NXD2 777 aa6.36□□□□□ -1.39
CLIP1-207ENST00000536634 DNMT3BQ9UBC3 853 aaKnown RBP6.36□□□□□ -1.39
CLIP1-207ENST00000536634 DBF4Q9UBU7 674 aaPredicted RBP6.36□□□□□ -1.39
CLIP1-207ENST00000536634 PADI4Q9UM07 663 aa6.36□□□□□ -1.39
CLIP1-207ENST00000536634 RIPOR2Q9Y4F9 1068 aa6.36□□□□□ -1.39
CLIP1-207ENST00000536634 MGAMO43451 1857 aa6.36□□□□□ -1.39
CLIP1-207ENST00000536634 NCOR1O75376 2440 aa6.35□□□□□ -1.39
CLIP1-207ENST00000536634 F8W8V4 182 aa6.35□□□□□ -1.39
CLIP1-207ENST00000536634 QSOX1O00391 747 aa6.35□□□□□ -1.39
CLIP1-207ENST00000536634 RASSF9O75901 435 aa6.35□□□□□ -1.39
CLIP1-207ENST00000536634 CD38P28907 300 aa6.35□□□□□ -1.39
CLIP1-207ENST00000536634 TMPOP42166 694 aaKnown RBP6.35□□□□□ -1.39
CLIP1-207ENST00000536634 PSMC4P43686 418 aa6.35□□□□□ -1.39
CLIP1-207ENST00000536634 EEFSECP57772 596 aaKnown RBP6.35□□□□□ -1.39
CLIP1-207ENST00000536634 CCDC142Q17RM4 750 aa6.35□□□□□ -1.39
CLIP1-207ENST00000536634 AARS2Q5JTZ9 985 aaKnown RBP6.35□□□□□ -1.39
CLIP1-207ENST00000536634 COLEC12Q5KU26 742 aa6.35□□□□□ -1.39
CLIP1-207ENST00000536634 CACHD1Q5VU97 1274 aa6.35□□□□□ -1.39
CLIP1-207ENST00000536634 C17orf99Q6UX52 265 aa6.35□□□□□ -1.39
CLIP1-207ENST00000536634 DPY19L3Q6ZPD9 716 aa6.35□□□□□ -1.39
CLIP1-207ENST00000536634 Q6ZWC4 215 aa6.35□□□□□ -1.39
CLIP1-207ENST00000536634 WDR53Q7Z5U6 358 aaPredicted RBP6.35□□□□□ -1.39
CLIP1-207ENST00000536634 CAND1Q86VP6 1230 aaKnown RBP6.35□□□□□ -1.39
CLIP1-207ENST00000536634 CCDC191Q8NCU4 936 aa6.35□□□□□ -1.39
CLIP1-207ENST00000536634 U2AF1L4Q8WU68 220 aaKnown RBP6.35□□□□□ -1.39
CLIP1-207ENST00000536634 REPS1Q96D71 796 aa6.35□□□□□ -1.39
CLIP1-207ENST00000536634 PPP1R9BQ96SB3 815 aa6.35□□□□□ -1.39
CLIP1-207ENST00000536634 GDF15Q99988 308 aa6.35□□□□□ -1.39
CLIP1-207ENST00000536634 MACROD1Q9BQ69 325 aa6.35□□□□□ -1.39
CLIP1-207ENST00000536634 C17orf80Q9BSJ5 609 aa6.35□□□□□ -1.39
CLIP1-207ENST00000536634 TMEM39BQ9GZU3 492 aa6.35□□□□□ -1.39
CLIP1-207ENST00000536634 CD209Q9NNX6 404 aa6.35□□□□□ -1.39
CLIP1-207ENST00000536634 TRMT13Q9NUP7 481 aaKnown RBP6.35□□□□□ -1.39
CLIP1-207ENST00000536634 HYPKQ9NX55 129 aa6.35□□□□□ -1.39
CLIP1-207ENST00000536634 CWC25Q9NXE8 425 aaPredicted RBP6.35□□□□□ -1.39
CLIP1-207ENST00000536634 LAS1LQ9Y4W2 734 aaKnown RBP6.35□□□□□ -1.39
CLIP1-207ENST00000536634 DOCK3Q8IZD9 2030 aa6.35□□□□□ -1.39
CLIP1-207ENST00000536634 LOC102723971A0A1B0GUV8 181 aa6.34□□□□□ -1.39
CLIP1-207ENST00000536634 WIPF3A6NGB9 483 aa6.34□□□□□ -1.39
CLIP1-207ENST00000536634 SRGAP2O75044 1071 aa6.34□□□□□ -1.39
CLIP1-207ENST00000536634 IGKV5-2P06315 115 aa6.34□□□□□ -1.39
CLIP1-207ENST00000536634 HOXB7P09629 217 aa6.34□□□□□ -1.39
CLIP1-207ENST00000536634 PTDSS1P48651 473 aaKnown RBP6.34□□□□□ -1.39
CLIP1-207ENST00000536634 ITGA8P53708 1063 aa6.34□□□□□ -1.39
CLIP1-207ENST00000536634 PRMT2P55345 433 aa6.34□□□□□ -1.39
CLIP1-207ENST00000536634 TPTEP56180 551 aa6.34□□□□□ -1.39
CLIP1-207ENST00000536634 MRPS21P82921 87 aaKnown RBP6.34□□□□□ -1.39
CLIP1-207ENST00000536634 PRKCZQ05513 592 aa6.34□□□□□ -1.39
CLIP1-207ENST00000536634 NPY5RQ15761 445 aa6.34□□□□□ -1.39
CLIP1-207ENST00000536634 CYP1B1Q16678 543 aa6.34□□□□□ -1.39
CLIP1-207ENST00000536634 PCID2Q5JVF3 399 aa6.34□□□□□ -1.39
CLIP1-207ENST00000536634 FCRLBQ6BAA4 426 aa6.34□□□□□ -1.39
CLIP1-207ENST00000536634 SPARTQ8N0X7 666 aa6.34□□□□□ -1.39
CLIP1-207ENST00000536634 RAET1EQ8TD07 263 aa6.34□□□□□ -1.39
CLIP1-207ENST00000536634 TBC1D5Q92609 795 aa6.34□□□□□ -1.39
CLIP1-207ENST00000536634 FSD1LQ9BXM9 530 aa6.34□□□□□ -1.39
CLIP1-207ENST00000536634 CHST8Q9H2A9 424 aa6.34□□□□□ -1.39
CLIP1-207ENST00000536634 ZNF70Q9UC06 446 aaPredicted RBP6.34□□□□□ -1.39
CLIP1-207ENST00000536634 MID2Q9UJV3 735 aa6.34□□□□□ -1.39
CLIP1-207ENST00000536634 GABRQQ9UN88 632 aa6.34□□□□□ -1.39
CLIP1-207ENST00000536634 ADAMTS5Q9UNA0 930 aa6.34□□□□□ -1.39
CLIP1-207ENST00000536634 TARM1B6A8C7 271 aa6.33□□□□□ -1.4
CLIP1-207ENST00000536634 TCP10L2B9ZVM9 353 aa6.33□□□□□ -1.4
CLIP1-207ENST00000536634 RAB27BO00194 218 aa6.33□□□□□ -1.4
CLIP1-207ENST00000536634 RRP9O43818 475 aaKnown RBP6.33□□□□□ -1.4
CLIP1-207ENST00000536634 RASAL1O95294 804 aa6.33□□□□□ -1.4
CLIP1-207ENST00000536634 SGPL1O95470 568 aa6.33□□□□□ -1.4
CLIP1-207ENST00000536634 TXNP10599 105 aaKnown RBP6.33□□□□□ -1.4
CLIP1-207ENST00000536634 RBM5P52756 815 aaKnown RBP eCLIP6.33□□□□□ -1.4
CLIP1-207ENST00000536634 CYP4F2P78329 520 aa6.33□□□□□ -1.4
CLIP1-207ENST00000536634 TFF2Q03403 129 aa6.33□□□□□ -1.4
CLIP1-207ENST00000536634 LRIT3Q3SXY7 679 aa6.33□□□□□ -1.4
CLIP1-207ENST00000536634 CERCAMQ5T4B2 595 aa6.33□□□□□ -1.4
CLIP1-207ENST00000536634 FCRL6Q6DN72 434 aa6.33□□□□□ -1.4
CLIP1-207ENST00000536634 CEP85Q6P2H3 762 aa6.33□□□□□ -1.4
CLIP1-207ENST00000536634 NAPRTQ6XQN6 538 aa6.33□□□□□ -1.4
CLIP1-207ENST00000536634 UNC13DQ70J99 1090 aa6.33□□□□□ -1.4
CLIP1-207ENST00000536634 PARS2Q7L3T8 475 aaKnown RBP6.33□□□□□ -1.4
CLIP1-207ENST00000536634 SLC29A4Q7RTT9 530 aa6.33□□□□□ -1.4
CLIP1-207ENST00000536634 FANCBQ8NB91 859 aa6.33□□□□□ -1.4
CLIP1-207ENST00000536634 RP9Q8TA86 221 aaKnown RBP6.33□□□□□ -1.4
CLIP1-207ENST00000536634 DPF1Q92782 380 aa6.33□□□□□ -1.4
CLIP1-207ENST00000536634 MSLNLQ96KJ4 702 aa6.33□□□□□ -1.4
CLIP1-207ENST00000536634 GUCD1Q96NT3 240 aa6.33□□□□□ -1.4
CLIP1-207ENST00000536634 TDRD3Q9H7E2 651 aaKnown RBP6.33□□□□□ -1.4
CLIP1-207ENST00000536634 ZCCHC17Q9NP64 241 aaKnown RBP6.33□□□□□ -1.4
CLIP1-207ENST00000536634 SH3BP4Q9P0V3 963 aa6.33□□□□□ -1.4
CLIP1-207ENST00000536634 ZMYND8Q9ULU4 1186 aaPredicted RBP6.33□□□□□ -1.4
CLIP1-207ENST00000536634 CCP110O43303 1012 aa6.32□□□□□ -1.4
CLIP1-207ENST00000536634 TAF5LO75529 589 aa6.32□□□□□ -1.4
CLIP1-207ENST00000536634 TJP3O95049 919 aa6.32□□□□□ -1.4
CLIP1-207ENST00000536634 PDE8BO95263 885 aa6.32□□□□□ -1.4
CLIP1-207ENST00000536634 NHLRC4P0CG21 123 aaPredicted RBP6.32□□□□□ -1.4
CLIP1-207ENST00000536634 CETPP11597 493 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms