RNA–Protein interactions for RNA: ENST00000536625.1

KNTC1-209, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 1,178 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-209ENST00000536625 TUBB8Q3ZCM7 444 aa4.99□□□□□ -1.61
KNTC1-209ENST00000536625 C10orf76Q5T2E6 689 aa4.99□□□□□ -1.61
KNTC1-209ENST00000536625 TAF2Q6P1X5 1199 aa4.99□□□□□ -1.61
KNTC1-209ENST00000536625 SRGAP1Q7Z6B7 1085 aa4.99□□□□□ -1.61
KNTC1-209ENST00000536625 PALB2Q86YC2 1186 aa4.99□□□□□ -1.61
KNTC1-209ENST00000536625 DENND1CQ8IV53 801 aa4.99□□□□□ -1.61
KNTC1-209ENST00000536625 CHPFQ8IZ52 775 aa4.99□□□□□ -1.61
KNTC1-209ENST00000536625 LRRC43Q8N309 656 aa4.99□□□□□ -1.61
KNTC1-209ENST00000536625 SLC44A3Q8N4M1 653 aa4.99□□□□□ -1.61
KNTC1-209ENST00000536625 RNF10Q8N5U6 811 aaKnown RBP4.99□□□□□ -1.61
KNTC1-209ENST00000536625 AOPEPQ8N6M6 819 aa4.99□□□□□ -1.61
KNTC1-209ENST00000536625 SUPT20HQ8NEM7 779 aa4.99□□□□□ -1.61
KNTC1-209ENST00000536625 TNIP2Q8NFZ5 429 aa4.99□□□□□ -1.61
KNTC1-209ENST00000536625 LILRB1Q8NHL6 650 aaPredicted RBP4.99□□□□□ -1.61
KNTC1-209ENST00000536625 SLC30A5Q8TAD4 765 aa4.99□□□□□ -1.61
KNTC1-209ENST00000536625 CCDC110Q8TBZ0 833 aa4.99□□□□□ -1.61
KNTC1-209ENST00000536625 FBXO41Q8TF61 875 aa4.99□□□□□ -1.61
KNTC1-209ENST00000536625 WDR60Q8WVS4 1066 aa4.99□□□□□ -1.61
KNTC1-209ENST00000536625 LPIN2Q92539 896 aa4.99□□□□□ -1.61
KNTC1-209ENST00000536625 KIFAP3Q92845 792 aa4.99□□□□□ -1.61
KNTC1-209ENST00000536625 TMEM125Q96AQ2 219 aa4.99□□□□□ -1.61
KNTC1-209ENST00000536625 CDHR1Q96JP9 859 aa4.99□□□□□ -1.61
KNTC1-209ENST00000536625 RPGRIP1Q96KN7 1286 aa4.99□□□□□ -1.61
KNTC1-209ENST00000536625 ANKRD27Q96NW4 1050 aa4.99□□□□□ -1.61
KNTC1-209ENST00000536625 NT5C1BQ96P26 610 aa4.99□□□□□ -1.61
KNTC1-209ENST00000536625 PRAM1Q96QH2 718 aa4.99□□□□□ -1.61
KNTC1-209ENST00000536625 SMC6Q96SB8 1091 aa4.99□□□□□ -1.61
KNTC1-209ENST00000536625 DRC3Q9H069 523 aa4.99□□□□□ -1.61
KNTC1-209ENST00000536625 NAT10Q9H0A0 1025 aaKnown RBP4.99□□□□□ -1.61
KNTC1-209ENST00000536625 VPS33BQ9H267 617 aa4.99□□□□□ -1.61
KNTC1-209ENST00000536625 VIPAS39Q9H9C1 493 aa4.99□□□□□ -1.61
KNTC1-209ENST00000536625 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.99□□□□□ -1.61
KNTC1-209ENST00000536625 HAUS2Q9NVX0 235 aa4.99□□□□□ -1.61
KNTC1-209ENST00000536625 TBK1Q9UHD2 729 aa4.99□□□□□ -1.61
KNTC1-209ENST00000536625 GTF3C4Q9UKN8 822 aa4.99□□□□□ -1.61
KNTC1-209ENST00000536625 NOB1Q9ULX3 412 aaKnown RBP4.99□□□□□ -1.61
KNTC1-209ENST00000536625 PCDHA6Q9UN73 950 aa4.99□□□□□ -1.61
KNTC1-209ENST00000536625 NOSIPQ9Y314 301 aaKnown RBP4.99□□□□□ -1.61
KNTC1-209ENST00000536625 SQORQ9Y6N5 450 aa4.99□□□□□ -1.61
KNTC1-209ENST00000536625 SCINQ9Y6U3 715 aa4.99□□□□□ -1.61
KNTC1-209ENST00000536625 GRIN2DO15399 1336 aa4.98□□□□□ -1.61
KNTC1-209ENST00000536625 ANKRD50Q9ULJ7 1429 aa4.98□□□□□ -1.61
KNTC1-209ENST00000536625 KAT6BQ8WYB5 2073 aa4.98□□□□□ -1.61
KNTC1-209ENST00000536625 TRGV11A0A075B6L2 103 aa4.98□□□□□ -1.61
KNTC1-209ENST00000536625 LOC105371267A0A1B0GV96 52 aa4.98□□□□□ -1.61
KNTC1-209ENST00000536625 BECN2A8MW95 431 aa4.98□□□□□ -1.61
KNTC1-209ENST00000536625 POLRMTO00411 1230 aaKnown RBP4.98□□□□□ -1.61
KNTC1-209ENST00000536625 MGST3O14880 152 aa4.98□□□□□ -1.61
KNTC1-209ENST00000536625 BIRC5O15392 142 aa4.98□□□□□ -1.61
KNTC1-209ENST00000536625 KCNJ13O60928 360 aa4.98□□□□□ -1.61
KNTC1-209ENST00000536625 LDHCP07864 332 aa4.98□□□□□ -1.61
KNTC1-209ENST00000536625 HNRNPCP07910 306 aaKnown RBP eCLIP4.98□□□□□ -1.61
KNTC1-209ENST00000536625 MYBP10242 640 aa4.98□□□□□ -1.61
KNTC1-209ENST00000536625 PRLRP16471 622 aa4.98□□□□□ -1.61
KNTC1-209ENST00000536625 HTR1BP28222 390 aa4.98□□□□□ -1.61
KNTC1-209ENST00000536625 CDC25CP30307 473 aa4.98□□□□□ -1.61
KNTC1-209ENST00000536625 STAT6P42226 847 aa4.98□□□□□ -1.61
KNTC1-209ENST00000536625 PIK3CAP42336 1068 aa4.98□□□□□ -1.61
KNTC1-209ENST00000536625 AGFG1P52594 562 aaKnown RBP4.98□□□□□ -1.61
KNTC1-209ENST00000536625 MTTPP55157 894 aa4.98□□□□□ -1.61
KNTC1-209ENST00000536625 GEMIN4P57678 1058 aaKnown RBP4.98□□□□□ -1.61
KNTC1-209ENST00000536625 GSDMDP57764 484 aa4.98□□□□□ -1.61
KNTC1-209ENST00000536625 UBE2HP62256 183 aa4.98□□□□□ -1.61
KNTC1-209ENST00000536625 RAB1AP62820 205 aa4.98□□□□□ -1.61
KNTC1-209ENST00000536625 GNGT1P63211 74 aa4.98□□□□□ -1.61
KNTC1-209ENST00000536625 MRPS35P82673 323 aaKnown RBP4.98□□□□□ -1.61
KNTC1-209ENST00000536625 PDE1BQ01064 536 aa4.98□□□□□ -1.61
KNTC1-209ENST00000536625 PIGFQ07326 219 aa4.98□□□□□ -1.61
KNTC1-209ENST00000536625 XRCC4Q13426 336 aa4.98□□□□□ -1.61
KNTC1-209ENST00000536625 HLXQ14774 488 aaPredicted RBP4.98□□□□□ -1.61
KNTC1-209ENST00000536625 CASP8Q14790 479 aa4.98□□□□□ -1.61
KNTC1-209ENST00000536625 TRIM71Q2Q1W2 868 aaKnown RBP4.98□□□□□ -1.61
KNTC1-209ENST00000536625 CCDC14Q49A88 953 aa4.98□□□□□ -1.61
KNTC1-209ENST00000536625 PRR16Q569H4 304 aa4.98□□□□□ -1.61
KNTC1-209ENST00000536625 NXNQ6DKJ4 435 aa4.98□□□□□ -1.61
KNTC1-209ENST00000536625 CCDC174Q6PII3 467 aa4.98□□□□□ -1.61
KNTC1-209ENST00000536625 SLC30A10Q6XR72 485 aa4.98□□□□□ -1.61
KNTC1-209ENST00000536625 C3orf62Q6ZUJ4 267 aa4.98□□□□□ -1.61
KNTC1-209ENST00000536625 PTF1AQ7RTS3 328 aa4.98□□□□□ -1.61
KNTC1-209ENST00000536625 KRT27Q7Z3Y8 459 aa4.98□□□□□ -1.61
KNTC1-209ENST00000536625 CHD1LQ86WJ1 897 aa4.98□□□□□ -1.61
KNTC1-209ENST00000536625 LURAP1LQ8IV03 231 aa4.98□□□□□ -1.61
KNTC1-209ENST00000536625 TCEAL8Q8IYN2 117 aa4.98□□□□□ -1.61
KNTC1-209ENST00000536625 LSMEM2Q8N112 164 aa4.98□□□□□ -1.61
KNTC1-209ENST00000536625 LINC00469Q8N7U9 141 aa4.98□□□□□ -1.61
KNTC1-209ENST00000536625 SPERTQ8NA61 448 aa4.98□□□□□ -1.61
KNTC1-209ENST00000536625 ZBTB34Q8NCN2 500 aa4.98□□□□□ -1.61
KNTC1-209ENST00000536625 ZFPM2Q8WW38 1151 aa4.98□□□□□ -1.61
KNTC1-209ENST00000536625 CAVIN3Q969G5 261 aa4.98□□□□□ -1.61
KNTC1-209ENST00000536625 C1orf74Q96LT6 269 aa4.98□□□□□ -1.61
KNTC1-209ENST00000536625 HNRNPABQ99729 332 aaKnown RBP4.98□□□□□ -1.61
KNTC1-209ENST00000536625 SMOQ99835 787 aa4.98□□□□□ -1.61
KNTC1-209ENST00000536625 MOV10L1Q9BXT6 1211 aaKnown RBP4.98□□□□□ -1.61
KNTC1-209ENST00000536625 XPO4Q9C0E2 1151 aaKnown RBP4.98□□□□□ -1.61
KNTC1-209ENST00000536625 ARMT1Q9H993 441 aa4.98□□□□□ -1.61
KNTC1-209ENST00000536625 CASS4Q9NQ75 786 aa4.98□□□□□ -1.61
KNTC1-209ENST00000536625 TCF7L2Q9NQB0 619 aa4.98□□□□□ -1.61
KNTC1-209ENST00000536625 MRGBPQ9NV56 204 aa4.98□□□□□ -1.61
KNTC1-209ENST00000536625 ATAD3AQ9NVI7 634 aa4.98□□□□□ -1.61
KNTC1-209ENST00000536625 INTS13Q9NVM9 706 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms