RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 GGA2Q9UJY4 613 aa13.64□□□□□ -0.23
PRKDC-206ENST00000536429 TMEM59LQ9UK28 342 aa13.64□□□□□ -0.23
PRKDC-206ENST00000536429 SNX10Q9Y5X0 201 aa13.64□□□□□ -0.23
PRKDC-206ENST00000536429 STON1Q9Y6Q2 735 aa13.64□□□□□ -0.23
PRKDC-206ENST00000536429 A0A1W2PQC6 194 aa13.63□□□□□ -0.23
PRKDC-206ENST00000536429 LRRC53A6NM62 1247 aa13.63□□□□□ -0.23
PRKDC-206ENST00000536429 ADCY5O95622 1261 aa13.63□□□□□ -0.23
PRKDC-206ENST00000536429 PABPC1P11940 636 aaKnown RBP13.63□□□□□ -0.23
PRKDC-206ENST00000536429 GABRG2P18507 467 aa13.63□□□□□ -0.23
PRKDC-206ENST00000536429 BCKDHBP21953 392 aa13.63□□□□□ -0.23
PRKDC-206ENST00000536429 TGM1P22735 817 aa13.63□□□□□ -0.23
PRKDC-206ENST00000536429 PRKCHP24723 683 aa13.63□□□□□ -0.23
PRKDC-206ENST00000536429 CCR1P32246 355 aa13.63□□□□□ -0.23
PRKDC-206ENST00000536429 SCNN1AP37088 669 aa13.63□□□□□ -0.23
PRKDC-206ENST00000536429 NUMBP49757 651 aa13.63□□□□□ -0.23
PRKDC-206ENST00000536429 SULT1E1P49888 294 aa13.63□□□□□ -0.23
PRKDC-206ENST00000536429 LMAN2Q12907 356 aa13.63□□□□□ -0.23
PRKDC-206ENST00000536429 ZNF234Q14588 700 aa13.63□□□□□ -0.23
PRKDC-206ENST00000536429 FUT11Q495W5 492 aa13.63□□□□□ -0.23
PRKDC-206ENST00000536429 FILIP1LQ4L180 1135 aa13.63□□□□□ -0.23
PRKDC-206ENST00000536429 MPP7Q5T2T1 576 aa13.63□□□□□ -0.23
PRKDC-206ENST00000536429 CHST9Q7L1S5 443 aa13.63□□□□□ -0.23
PRKDC-206ENST00000536429 TRMT11Q7Z4G4 463 aaKnown RBP13.63□□□□□ -0.23
PRKDC-206ENST00000536429 KIAA0907Q7Z7F0 614 aaPredicted RBP13.63□□□□□ -0.23
PRKDC-206ENST00000536429 C14orf80Q86SX3 495 aa13.63□□□□□ -0.23
PRKDC-206ENST00000536429 MFN1Q8IWA4 741 aa13.63□□□□□ -0.23
PRKDC-206ENST00000536429 CARNMT1Q8N4J0 409 aa13.63□□□□□ -0.23
PRKDC-206ENST00000536429 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.63□□□□□ -0.23
PRKDC-206ENST00000536429 HJURPQ8NCD3 748 aaPredicted RBP13.63□□□□□ -0.23
PRKDC-206ENST00000536429 JOSD2Q8TAC2 188 aa13.63□□□□□ -0.23
PRKDC-206ENST00000536429 RNF34Q969K3 372 aa13.63□□□□□ -0.23
PRKDC-206ENST00000536429 NT5C3BQ969T7 300 aa13.63□□□□□ -0.23
PRKDC-206ENST00000536429 CFAP57Q96MR6 1250 aa13.63□□□□□ -0.23
PRKDC-206ENST00000536429 AGPAT1Q99943 283 aa13.63□□□□□ -0.23
PRKDC-206ENST00000536429 DDX50Q9BQ39 737 aaKnown RBP13.63□□□□□ -0.23
PRKDC-206ENST00000536429 SYT11Q9BT88 431 aa13.63□□□□□ -0.23
PRKDC-206ENST00000536429 POLMQ9NP87 494 aaPredicted RBP13.63□□□□□ -0.23
PRKDC-206ENST00000536429 CD93Q9NPY3 652 aa13.63□□□□□ -0.23
PRKDC-206ENST00000536429 SEPT11Q9NVA2 429 aaKnown RBP13.63□□□□□ -0.23
PRKDC-206ENST00000536429 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.63□□□□□ -0.23
PRKDC-206ENST00000536429 NCDNQ9UBB6 729 aa13.63□□□□□ -0.23
PRKDC-206ENST00000536429 INTS6Q9UL03 887 aaKnown RBP13.63□□□□□ -0.23
PRKDC-206ENST00000536429 DCHS1Q96JQ0 3298 aa13.63□□□□□ -0.23
PRKDC-206ENST00000536429 PAGE1O75459 146 aa13.62□□□□□ -0.23
PRKDC-206ENST00000536429 ALDH1A2O94788 518 aa13.62□□□□□ -0.23
PRKDC-206ENST00000536429 HLA-EP13747 358 aa13.62□□□□□ -0.23
PRKDC-206ENST00000536429 FERP16591 822 aa13.62□□□□□ -0.23
PRKDC-206ENST00000536429 NDUFV2P19404 249 aa13.62□□□□□ -0.23
PRKDC-206ENST00000536429 ABCB4P21439 1286 aa13.62□□□□□ -0.23
PRKDC-206ENST00000536429 GBP1P32455 592 aa13.62□□□□□ -0.23
PRKDC-206ENST00000536429 PBX1P40424 430 aa13.62□□□□□ -0.23
PRKDC-206ENST00000536429 CENPCQ03188 943 aa13.62□□□□□ -0.23
PRKDC-206ENST00000536429 ENPP2Q13822 863 aa13.62□□□□□ -0.23
PRKDC-206ENST00000536429 PTPRNQ16849 979 aa13.62□□□□□ -0.23
PRKDC-206ENST00000536429 SKOR2Q2VWA4 1001 aaPredicted RBP13.62□□□□□ -0.23
PRKDC-206ENST00000536429 PLK5Q496M5 336 aa13.62□□□□□ -0.23
PRKDC-206ENST00000536429 MBLAC2Q68D91 279 aa13.62□□□□□ -0.23
PRKDC-206ENST00000536429 LAIR1Q6GTX8 287 aa13.62□□□□□ -0.23
PRKDC-206ENST00000536429 FBXL22Q6P050 247 aa13.62□□□□□ -0.23
PRKDC-206ENST00000536429 TRIM72Q6ZMU5 477 aa13.62□□□□□ -0.23
PRKDC-206ENST00000536429 BNIPLQ7Z465 357 aa13.62□□□□□ -0.23
PRKDC-206ENST00000536429 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.62□□□□□ -0.23
PRKDC-206ENST00000536429 DNAAF5Q86Y56 855 aa13.62□□□□□ -0.23
PRKDC-206ENST00000536429 KIAA2013Q8IYS2 634 aa13.62□□□□□ -0.23
PRKDC-206ENST00000536429 ZNF366Q8N895 744 aa13.62□□□□□ -0.23
PRKDC-206ENST00000536429 ATP6V0D2Q8N8Y2 350 aa13.62□□□□□ -0.23
PRKDC-206ENST00000536429 IGSF8Q969P0 613 aa13.62□□□□□ -0.23
PRKDC-206ENST00000536429 DUSP15Q9H1R2 295 aaPredicted RBP13.62□□□□□ -0.23
PRKDC-206ENST00000536429 TAS2R14Q9NYV8 317 aa13.62□□□□□ -0.23
PRKDC-206ENST00000536429 BCCIPQ9P287 314 aaKnown RBP eCLIP13.62□□□□□ -0.23
PRKDC-206ENST00000536429 RAB23Q9ULC3 237 aa13.62□□□□□ -0.23
PRKDC-206ENST00000536429 HS3ST4Q9Y661 456 aa13.62□□□□□ -0.23
PRKDC-206ENST00000536429 F5H5T6 163 aa13.61□□□□□ -0.23
PRKDC-206ENST00000536429 LUC7L3O95232 432 aaKnown RBP13.61□□□□□ -0.23
PRKDC-206ENST00000536429 RETP07949 1114 aa13.61□□□□□ -0.23
PRKDC-206ENST00000536429 SLC2A3P11169 496 aa13.61□□□□□ -0.23
PRKDC-206ENST00000536429 NSFP46459 744 aaKnown RBP13.61□□□□□ -0.23
PRKDC-206ENST00000536429 CXCR3P49682 368 aa13.61□□□□□ -0.23
PRKDC-206ENST00000536429 DEUP1Q05D60 604 aa13.61□□□□□ -0.23
PRKDC-206ENST00000536429 AUHQ13825 339 aaKnown RBP13.61□□□□□ -0.23
PRKDC-206ENST00000536429 EIF4HQ15056 248 aaKnown RBP13.61□□□□□ -0.23
PRKDC-206ENST00000536429 CCDC6Q16204 474 aa13.61□□□□□ -0.23
PRKDC-206ENST00000536429 C15orf59Q2T9L4 293 aaPredicted RBP13.61□□□□□ -0.23
PRKDC-206ENST00000536429 MAP7D1Q3KQU3 841 aa13.61□□□□□ -0.23
PRKDC-206ENST00000536429 SLC25A52Q3SY17 297 aa13.61□□□□□ -0.23
PRKDC-206ENST00000536429 ARTNQ5T4W7 220 aa13.61□□□□□ -0.23
PRKDC-206ENST00000536429 SH3PXD2AQ5TCZ1 1133 aa13.61□□□□□ -0.23
PRKDC-206ENST00000536429 SDE2Q6IQ49 451 aa13.61□□□□□ -0.23
PRKDC-206ENST00000536429 MON1BQ7L1V2 547 aa13.61□□□□□ -0.23
PRKDC-206ENST00000536429 PHF13Q86YI8 300 aaPredicted RBP13.61□□□□□ -0.23
PRKDC-206ENST00000536429 AHI1Q8N157 1196 aa13.61□□□□□ -0.23
PRKDC-206ENST00000536429 PGBD3Q8N328 593 aa13.61□□□□□ -0.23
PRKDC-206ENST00000536429 MSANTD4Q8NCY6 345 aa13.61□□□□□ -0.23
PRKDC-206ENST00000536429 FIBINQ8TAL6 211 aa13.61□□□□□ -0.23
PRKDC-206ENST00000536429 WFIKKN2Q8TEU8 576 aa13.61□□□□□ -0.23
PRKDC-206ENST00000536429 PGAP3Q96FM1 320 aaPredicted RBP13.61□□□□□ -0.23
PRKDC-206ENST00000536429 IRX2Q9BZI1 471 aaPredicted RBP13.61□□□□□ -0.23
PRKDC-206ENST00000536429 TKTL2Q9H0I9 626 aa13.61□□□□□ -0.23
PRKDC-206ENST00000536429 ARHGEF38Q9NXL2 777 aa13.61□□□□□ -0.23
PRKDC-206ENST00000536429 ADAM22Q9P0K1 906 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms