RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 HLA-FP30511 346 aa11.71□□□□□ -0.53
TNFRSF1A-208ENST00000536194 ZNF143P52747 638 aaPredicted RBP11.71□□□□□ -0.53
TNFRSF1A-208ENST00000536194 NUBP1P53384 320 aa11.71□□□□□ -0.53
TNFRSF1A-208ENST00000536194 SATB1Q01826 763 aa11.71□□□□□ -0.53
TNFRSF1A-208ENST00000536194 ANGPT1Q15389 498 aa11.71□□□□□ -0.53
TNFRSF1A-208ENST00000536194 GEN1Q17RS7 908 aa11.71□□□□□ -0.53
TNFRSF1A-208ENST00000536194 FBXO43Q4G163 708 aa11.71□□□□□ -0.53
TNFRSF1A-208ENST00000536194 CCDC122Q5T0U0 273 aa11.71□□□□□ -0.53
TNFRSF1A-208ENST00000536194 C10orf76Q5T2E6 689 aa11.71□□□□□ -0.53
TNFRSF1A-208ENST00000536194 MPP7Q5T2T1 576 aa11.71□□□□□ -0.53
TNFRSF1A-208ENST00000536194 TMEM215Q68D42 235 aa11.71□□□□□ -0.53
TNFRSF1A-208ENST00000536194 FBXL22Q6P050 247 aa11.71□□□□□ -0.53
TNFRSF1A-208ENST00000536194 MAMSTRQ6ZN01 415 aa11.71□□□□□ -0.53
TNFRSF1A-208ENST00000536194 STRADAQ7RTN6 431 aa11.71□□□□□ -0.53
TNFRSF1A-208ENST00000536194 CIR1Q86X95 450 aaPredicted RBP11.71□□□□□ -0.53
TNFRSF1A-208ENST00000536194 ZNF683Q8IZ20 524 aa11.71□□□□□ -0.53
TNFRSF1A-208ENST00000536194 SYNPOQ8N3V7 929 aa11.71□□□□□ -0.53
TNFRSF1A-208ENST00000536194 ARFGAP1Q8N6T3 406 aa11.71□□□□□ -0.53
TNFRSF1A-208ENST00000536194 HJURPQ8NCD3 748 aaPredicted RBP11.71□□□□□ -0.53
TNFRSF1A-208ENST00000536194 RPLP0P6Q8NHW5 317 aa11.71□□□□□ -0.53
TNFRSF1A-208ENST00000536194 USP33Q8TEY7 942 aa11.71□□□□□ -0.53
TNFRSF1A-208ENST00000536194 FAM172AQ8WUF8 416 aa11.71□□□□□ -0.53
TNFRSF1A-208ENST00000536194 IGSF8Q969P0 613 aa11.71□□□□□ -0.53
TNFRSF1A-208ENST00000536194 EXOC4Q96A65 974 aa11.71□□□□□ -0.53
TNFRSF1A-208ENST00000536194 ARHGEF26Q96DR7 871 aa11.71□□□□□ -0.53
TNFRSF1A-208ENST00000536194 LMLNQ96KR4 655 aa11.71□□□□□ -0.53
TNFRSF1A-208ENST00000536194 DDX50Q9BQ39 737 aaKnown RBP11.71□□□□□ -0.53
TNFRSF1A-208ENST00000536194 PACSIN1Q9BY11 444 aa11.71□□□□□ -0.53
TNFRSF1A-208ENST00000536194 MAGEB5Q9BZ81 275 aa11.71□□□□□ -0.53
TNFRSF1A-208ENST00000536194 IRX2Q9BZI1 471 aaPredicted RBP11.71□□□□□ -0.53
TNFRSF1A-208ENST00000536194 SIK2Q9H0K1 926 aa11.71□□□□□ -0.53
TNFRSF1A-208ENST00000536194 NHEJ1Q9H9Q4 299 aaPredicted RBP11.71□□□□□ -0.53
TNFRSF1A-208ENST00000536194 PRMT8Q9NR22 394 aaPredicted RBP11.71□□□□□ -0.53
TNFRSF1A-208ENST00000536194 SPTLC3Q9NUV7 552 aa11.71□□□□□ -0.53
TNFRSF1A-208ENST00000536194 PARVAQ9NVD7 372 aa11.71□□□□□ -0.53
TNFRSF1A-208ENST00000536194 SPATA6Q9NWH7 488 aaPredicted RBP11.71□□□□□ -0.53
TNFRSF1A-208ENST00000536194 STIM2Q9P246 746 aa11.71□□□□□ -0.53
TNFRSF1A-208ENST00000536194 MYO1AQ9UBC5 1043 aa11.71□□□□□ -0.53
TNFRSF1A-208ENST00000536194 WDFY4Q6ZS81 3184 aa11.71□□□□□ -0.54
TNFRSF1A-208ENST00000536194 CHURC1-FNTBB4DL54 471 aa11.7□□□□□ -0.54
TNFRSF1A-208ENST00000536194 F5H5T6 163 aa11.7□□□□□ -0.54
TNFRSF1A-208ENST00000536194 MYBL1P10243 752 aa11.7□□□□□ -0.54
TNFRSF1A-208ENST00000536194 TDGF1P13385 188 aa11.7□□□□□ -0.54
TNFRSF1A-208ENST00000536194 TIE1P35590 1138 aa11.7□□□□□ -0.54
TNFRSF1A-208ENST00000536194 TNFRSF4P43489 277 aa11.7□□□□□ -0.54
TNFRSF1A-208ENST00000536194 GALCP54803 685 aa11.7□□□□□ -0.54
TNFRSF1A-208ENST00000536194 AUHQ13825 339 aaKnown RBP11.7□□□□□ -0.54
TNFRSF1A-208ENST00000536194 C2orf27AQ580R0 203 aa11.7□□□□□ -0.54
TNFRSF1A-208ENST00000536194 FSCBQ5H9T9 825 aa11.7□□□□□ -0.54
TNFRSF1A-208ENST00000536194 DCUN1D2Q6PH85 259 aa11.7□□□□□ -0.54
TNFRSF1A-208ENST00000536194 TSSK4Q6SA08 328 aa11.7□□□□□ -0.54
TNFRSF1A-208ENST00000536194 SND1Q7KZF4 910 aaKnown RBP eCLIP11.7□□□□□ -0.54
TNFRSF1A-208ENST00000536194 KIAA0907Q7Z7F0 614 aaPredicted RBP11.7□□□□□ -0.54
TNFRSF1A-208ENST00000536194 SPEM1Q8N4L4 309 aa11.7□□□□□ -0.54
TNFRSF1A-208ENST00000536194 CCDC185Q8N715 623 aa11.7□□□□□ -0.54
TNFRSF1A-208ENST00000536194 IL17RCQ8NAC3 791 aa11.7□□□□□ -0.54
TNFRSF1A-208ENST00000536194 TRIM11Q96F44 468 aa11.7□□□□□ -0.54
TNFRSF1A-208ENST00000536194 CNPY3Q9BT09 278 aa11.7□□□□□ -0.54
TNFRSF1A-208ENST00000536194 IER2Q9BTL4 223 aa11.7□□□□□ -0.54
TNFRSF1A-208ENST00000536194 SLC2A11Q9BYW1 496 aa11.7□□□□□ -0.54
TNFRSF1A-208ENST00000536194 ABCB8Q9NUT2 735 aa11.7□□□□□ -0.54
TNFRSF1A-208ENST00000536194 ZNHIT6Q9NWK9 470 aaKnown RBP11.7□□□□□ -0.54
TNFRSF1A-208ENST00000536194 SLC12A6Q9UHW9 1150 aa11.7□□□□□ -0.54
TNFRSF1A-208ENST00000536194 VANGL2Q9ULK5 521 aa11.7□□□□□ -0.54
TNFRSF1A-208ENST00000536194 NYNRINQ9P2P1 1898 aaKnown RBP11.7□□□□□ -0.54
TNFRSF1A-208ENST00000536194 CKAP5Q14008 2032 aa11.69□□□□□ -0.54
TNFRSF1A-208ENST00000536194 CHD5Q8TDI0 1954 aa11.69□□□□□ -0.54
TNFRSF1A-208ENST00000536194 ANKRD62A6NC57 917 aa11.69□□□□□ -0.54
TNFRSF1A-208ENST00000536194 H0Y858 1186 aa11.69□□□□□ -0.54
TNFRSF1A-208ENST00000536194 K7ESF4 209 aa11.69□□□□□ -0.54
TNFRSF1A-208ENST00000536194 LAMTOR5O43504 91 aa11.69□□□□□ -0.54
TNFRSF1A-208ENST00000536194 LUC7L3O95232 432 aaKnown RBP11.69□□□□□ -0.54
TNFRSF1A-208ENST00000536194 CYP1A2P05177 515 aa11.69□□□□□ -0.54
TNFRSF1A-208ENST00000536194 HNRNPLP14866 589 aaKnown RBP eCLIP11.69□□□□□ -0.54
TNFRSF1A-208ENST00000536194 FECHP22830 423 aa11.69□□□□□ -0.54
TNFRSF1A-208ENST00000536194 CDC25BP30305 580 aa11.69□□□□□ -0.54
TNFRSF1A-208ENST00000536194 CD70P32970 193 aa11.69□□□□□ -0.54
TNFRSF1A-208ENST00000536194 ADRA1BP35368 520 aa11.69□□□□□ -0.54
TNFRSF1A-208ENST00000536194 MTA1Q13330 715 aa11.69□□□□□ -0.54
TNFRSF1A-208ENST00000536194 TSR1Q2NL82 804 aaKnown RBP11.69□□□□□ -0.54
TNFRSF1A-208ENST00000536194 C5orf22Q49AR2 442 aa11.69□□□□□ -0.54
TNFRSF1A-208ENST00000536194 ALFQ53S48 1182 aa11.69□□□□□ -0.54
TNFRSF1A-208ENST00000536194 DAB2IPQ5VWQ8 1189 aa11.69□□□□□ -0.54
TNFRSF1A-208ENST00000536194 EGFLAMQ63HQ2 1017 aa11.69□□□□□ -0.54
TNFRSF1A-208ENST00000536194 CYP4V2Q6ZWL3 525 aaPredicted RBP11.69□□□□□ -0.54
TNFRSF1A-208ENST00000536194 ADIPOR2Q86V24 386 aa11.69□□□□□ -0.54
TNFRSF1A-208ENST00000536194 MFN1Q8IWA4 741 aa11.69□□□□□ -0.54
TNFRSF1A-208ENST00000536194 CARNMT1Q8N4J0 409 aa11.69□□□□□ -0.54
TNFRSF1A-208ENST00000536194 CCDC33Q8N5R6 958 aa11.69□□□□□ -0.54
TNFRSF1A-208ENST00000536194 ALLCQ8N6M5 410 aa11.69□□□□□ -0.54
TNFRSF1A-208ENST00000536194 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.69□□□□□ -0.54
TNFRSF1A-208ENST00000536194 OR52K2Q8NGK3 314 aa11.69□□□□□ -0.54
TNFRSF1A-208ENST00000536194 FNIP1Q8TF40 1166 aa11.69□□□□□ -0.54
TNFRSF1A-208ENST00000536194 HAPLN3Q96S86 360 aa11.69□□□□□ -0.54
TNFRSF1A-208ENST00000536194 PEBP4Q96S96 227 aa11.69□□□□□ -0.54
TNFRSF1A-208ENST00000536194 ACOX2Q99424 681 aa11.69□□□□□ -0.54
TNFRSF1A-208ENST00000536194 INTS6Q9UL03 887 aaKnown RBP11.69□□□□□ -0.54
TNFRSF1A-208ENST00000536194 NEU3Q9UQ49 428 aa11.69□□□□□ -0.54
TNFRSF1A-208ENST00000536194 STARD13Q9Y3M8 1113 aa11.69□□□□□ -0.54
TNFRSF1A-208ENST00000536194 HCN4Q9Y3Q4 1203 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms