RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 LDLRAD1Q5T700 205 aa18.46■□□□□ 0.55
RAB40C-203ENST00000535977 KLHDC10Q6PID8 442 aa18.46■□□□□ 0.55
RAB40C-203ENST00000535977 NET1Q7Z628 596 aaPredicted RBP18.46■□□□□ 0.55
RAB40C-203ENST00000535977 ACOT1Q86TX2 421 aa18.46■□□□□ 0.55
RAB40C-203ENST00000535977 IGDCC3Q8IVU1 814 aa18.46■□□□□ 0.55
RAB40C-203ENST00000535977 TMEM130Q8N3G9 435 aa18.46■□□□□ 0.55
RAB40C-203ENST00000535977 TAB3Q8N5C8 712 aaPredicted RBP18.46■□□□□ 0.55
RAB40C-203ENST00000535977 FBXO27Q8NI29 283 aa18.46■□□□□ 0.55
RAB40C-203ENST00000535977 PCDH19Q8TAB3 1148 aa18.46■□□□□ 0.55
RAB40C-203ENST00000535977 DIS3LQ8TF46 1054 aaKnown RBP18.46■□□□□ 0.55
RAB40C-203ENST00000535977 KHSRPQ92945 711 aaKnown RBP eCLIP18.46■□□□□ 0.55
RAB40C-203ENST00000535977 TDRKHQ9Y2W6 561 aaKnown RBP18.46■□□□□ 0.55
RAB40C-203ENST00000535977 ARFIP2P53365 341 aa18.46■□□□□ 0.55
RAB40C-203ENST00000535977 KRT72Q14CN4 511 aa18.46■□□□□ 0.55
RAB40C-203ENST00000535977 MARCH8Q5T0T0 291 aa18.46■□□□□ 0.55
RAB40C-203ENST00000535977 ZNF276Q8N554 614 aa18.46■□□□□ 0.55
RAB40C-203ENST00000535977 PRICKLE1Q96MT3 831 aaPredicted RBP18.46■□□□□ 0.55
RAB40C-203ENST00000535977 MRPL45Q9BRJ2 306 aaKnown RBP18.46■□□□□ 0.55
RAB40C-203ENST00000535977 KATNBL1Q9H079 304 aa18.46■□□□□ 0.55
RAB40C-203ENST00000535977 ZDHHC7Q9NXF8 308 aa18.46■□□□□ 0.55
RAB40C-203ENST00000535977 CCDC160A6NGH7 325 aa18.45■□□□□ 0.54
RAB40C-203ENST00000535977 MAGEC1O60732 1142 aa18.45■□□□□ 0.54
RAB40C-203ENST00000535977 DNAJC6O75061 913 aa18.45■□□□□ 0.54
RAB40C-203ENST00000535977 GCATO75600 419 aa18.45■□□□□ 0.54
RAB40C-203ENST00000535977 RBL1P28749 1068 aa18.45■□□□□ 0.54
RAB40C-203ENST00000535977 ADCYAP1R1P41586 468 aa18.45■□□□□ 0.54
RAB40C-203ENST00000535977 DCTN2Q13561 401 aaKnown RBP18.45■□□□□ 0.54
RAB40C-203ENST00000535977 DPYSL2Q16555 572 aa18.45■□□□□ 0.54
RAB40C-203ENST00000535977 DUSP28Q4G0W2 176 aa18.45■□□□□ 0.54
RAB40C-203ENST00000535977 NOTUMQ6P988 496 aa18.45■□□□□ 0.54
RAB40C-203ENST00000535977 SLC26A9Q7LBE3 791 aa18.45■□□□□ 0.54
RAB40C-203ENST00000535977 CEP70Q8NHQ1 597 aa18.45■□□□□ 0.54
RAB40C-203ENST00000535977 CENPIQ92674 756 aaPredicted RBP18.45■□□□□ 0.54
RAB40C-203ENST00000535977 SLC10A4Q96EP9 437 aa18.45■□□□□ 0.54
RAB40C-203ENST00000535977 PIWIL1Q96J94 861 aaKnown RBP18.45■□□□□ 0.54
RAB40C-203ENST00000535977 TRIM55Q9BYV6 548 aa18.45■□□□□ 0.54
RAB40C-203ENST00000535977 NRDE2Q9H7Z3 1164 aa18.45■□□□□ 0.54
RAB40C-203ENST00000535977 ARMCX1Q9P291 453 aa18.45■□□□□ 0.54
RAB40C-203ENST00000535977 GTF2IRD1Q9UHL9 959 aa18.45■□□□□ 0.54
RAB40C-203ENST00000535977 HEY1Q9Y5J3 304 aa18.45■□□□□ 0.54
RAB40C-203ENST00000535977 C2orf71A6NGG8 1288 aa18.45■□□□□ 0.54
RAB40C-203ENST00000535977 B2RBV5 119 aa18.45■□□□□ 0.54
RAB40C-203ENST00000535977 PIK3R2O00459 728 aa18.45■□□□□ 0.54
RAB40C-203ENST00000535977 PAPSS1O43252 624 aaPredicted RBP18.45■□□□□ 0.54
RAB40C-203ENST00000535977 CD4P01730 458 aa18.45■□□□□ 0.54
RAB40C-203ENST00000535977 SNRPAP09012 282 aaKnown RBP18.45■□□□□ 0.54
RAB40C-203ENST00000535977 UQCRBP14927 111 aa18.45■□□□□ 0.54
RAB40C-203ENST00000535977 PRKCHP24723 683 aa18.45■□□□□ 0.54
RAB40C-203ENST00000535977 AXLP30530 894 aa18.45■□□□□ 0.54
RAB40C-203ENST00000535977 MLH1P40692 756 aa18.45■□□□□ 0.54
RAB40C-203ENST00000535977 ACTR3P61158 418 aa18.45■□□□□ 0.54
RAB40C-203ENST00000535977 YWHAZP63104 245 aaKnown RBP18.45■□□□□ 0.54
RAB40C-203ENST00000535977 CDK16Q00536 496 aa18.45■□□□□ 0.54
RAB40C-203ENST00000535977 BST2Q10589 180 aaKnown RBP18.45■□□□□ 0.54
RAB40C-203ENST00000535977 TBL3Q12788 808 aaKnown RBP18.45■□□□□ 0.54
RAB40C-203ENST00000535977 ASPHQ12797 758 aa18.45■□□□□ 0.54
RAB40C-203ENST00000535977 DLG1Q12959 904 aa18.45■□□□□ 0.54
RAB40C-203ENST00000535977 MSLNQ13421 630 aaPredicted RBP18.45■□□□□ 0.54
RAB40C-203ENST00000535977 SLC25A41Q8N5S1 370 aa18.45■□□□□ 0.54
RAB40C-203ENST00000535977 ANKRD52Q8NB46 1076 aa18.45■□□□□ 0.54
RAB40C-203ENST00000535977 CCDC110Q8TBZ0 833 aa18.45■□□□□ 0.54
RAB40C-203ENST00000535977 MTBPQ96DY7 904 aa18.45■□□□□ 0.54
RAB40C-203ENST00000535977 ADAMTS10Q9H324 1103 aa18.45■□□□□ 0.54
RAB40C-203ENST00000535977 DNAJB4Q9UDY4 337 aa18.45■□□□□ 0.54
RAB40C-203ENST00000535977 ZC3H7BQ9UGR2 993 aaKnown RBP18.45■□□□□ 0.54
RAB40C-203ENST00000535977 XPOTO43592 962 aaKnown RBP18.44■□□□□ 0.54
RAB40C-203ENST00000535977 SMIM18P0DKX4 95 aa18.44■□□□□ 0.54
RAB40C-203ENST00000535977 RPL34P49207 117 aaKnown RBP18.44■□□□□ 0.54
RAB40C-203ENST00000535977 BCAT1P54687 386 aa18.44■□□□□ 0.54
RAB40C-203ENST00000535977 OXCT1P55809 520 aa18.44■□□□□ 0.54
RAB40C-203ENST00000535977 FAAP100Q0VG06 881 aa18.44■□□□□ 0.54
RAB40C-203ENST00000535977 TRMT5Q32P41 509 aaKnown RBP18.44■□□□□ 0.54
RAB40C-203ENST00000535977 IQSEC1Q6DN90 963 aa18.44■□□□□ 0.54
RAB40C-203ENST00000535977 TRIM67Q6ZTA4 783 aa18.44■□□□□ 0.54
RAB40C-203ENST00000535977 SH2D5Q6ZV89 423 aa18.44■□□□□ 0.54
RAB40C-203ENST00000535977 SCUBE3Q8IX30 993 aa18.44■□□□□ 0.54
RAB40C-203ENST00000535977 CRYBG2Q8N1P7 616 aa18.44■□□□□ 0.54
RAB40C-203ENST00000535977 OR6B3Q8NGW1 331 aa18.44■□□□□ 0.54
RAB40C-203ENST00000535977 HSPBAP1Q96EW2 488 aa18.44■□□□□ 0.54
RAB40C-203ENST00000535977 TMEM120AQ9BXJ8 343 aa18.44■□□□□ 0.54
RAB40C-203ENST00000535977 UBQLN1Q9UMX0 589 aaKnown RBP18.44■□□□□ 0.54
RAB40C-203ENST00000535977 RALGAPA2Q2PPJ7 1873 aa18.44■□□□□ 0.54
RAB40C-203ENST00000535977 H3BRJ5 948 aa18.44■□□□□ 0.54
RAB40C-203ENST00000535977 KLF11O14901 512 aa18.44■□□□□ 0.54
RAB40C-203ENST00000535977 CIB2O75838 187 aa18.44■□□□□ 0.54
RAB40C-203ENST00000535977 MMP3P08254 477 aa18.44■□□□□ 0.54
RAB40C-203ENST00000535977 TPSB2P20231 275 aa18.44■□□□□ 0.54
RAB40C-203ENST00000535977 HDAC4P56524 1084 aa18.44■□□□□ 0.54
RAB40C-203ENST00000535977 TPSAB1Q15661 275 aa18.44■□□□□ 0.54
RAB40C-203ENST00000535977 CATSPER4Q7RTX7 472 aa18.44■□□□□ 0.54
RAB40C-203ENST00000535977 PHF12Q96QT6 1004 aa18.44■□□□□ 0.54
RAB40C-203ENST00000535977 KCNK13Q9HB14 408 aa18.44■□□□□ 0.54
RAB40C-203ENST00000535977 SNTG2Q9NY99 539 aa18.44■□□□□ 0.54
RAB40C-203ENST00000535977 CNTN3Q9P232 1028 aa18.44■□□□□ 0.54
RAB40C-203ENST00000535977 STK10O94804 968 aaKnown RBP18.43■□□□□ 0.54
RAB40C-203ENST00000535977 SNAI1O95863 264 aaPredicted RBP18.43■□□□□ 0.54
RAB40C-203ENST00000535977 VCLP18206 1134 aa18.43■□□□□ 0.54
RAB40C-203ENST00000535977 CYP2F1P24903 491 aa18.43■□□□□ 0.54
RAB40C-203ENST00000535977 HOXA11P31270 313 aaPredicted RBP18.43■□□□□ 0.54
RAB40C-203ENST00000535977 PNPLA4P41247 253 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms