RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 TULP2O00295 520 aa11.68□□□□□ -0.54
CLSTN3-206ENST00000535668 VILLO15195 856 aa11.68□□□□□ -0.54
CLSTN3-206ENST00000535668 TNFSF14O43557 240 aa11.68□□□□□ -0.54
CLSTN3-206ENST00000535668 ASLP04424 464 aa11.68□□□□□ -0.54
CLSTN3-206ENST00000535668 C1SP09871 688 aa11.68□□□□□ -0.54
CLSTN3-206ENST00000535668 EPB41P11171 864 aaKnown RBP11.68□□□□□ -0.54
CLSTN3-206ENST00000535668 ACADMP11310 421 aa11.68□□□□□ -0.54
CLSTN3-206ENST00000535668 PABPC1P11940 636 aaKnown RBP11.68□□□□□ -0.54
CLSTN3-206ENST00000535668 ACSL1P33121 698 aa11.68□□□□□ -0.54
CLSTN3-206ENST00000535668 CTSKP43235 329 aa11.68□□□□□ -0.54
CLSTN3-206ENST00000535668 RPS14P62263 151 aaKnown RBP11.68□□□□□ -0.54
CLSTN3-206ENST00000535668 RACK1P63244 317 aaKnown RBP11.68□□□□□ -0.54
CLSTN3-206ENST00000535668 SFSWAPQ12872 951 aaKnown RBP11.68□□□□□ -0.54
CLSTN3-206ENST00000535668 CBWD6Q4V339 395 aa11.68□□□□□ -0.54
CLSTN3-206ENST00000535668 ZNF394Q53GI3 561 aa11.68□□□□□ -0.54
CLSTN3-206ENST00000535668 FAM133BQ5BKY9 247 aaKnown RBP11.68□□□□□ -0.54
CLSTN3-206ENST00000535668 CBWD3Q5JTY5 395 aa11.68□□□□□ -0.54
CLSTN3-206ENST00000535668 CBWD5Q5RIA9 395 aa11.68□□□□□ -0.54
CLSTN3-206ENST00000535668 GALNT15Q8N3T1 639 aa11.68□□□□□ -0.54
CLSTN3-206ENST00000535668 STK32AQ8WU08 396 aa11.68□□□□□ -0.54
CLSTN3-206ENST00000535668 EEF2KMTQ96G04 330 aa11.68□□□□□ -0.54
CLSTN3-206ENST00000535668 SLC39A13Q96H72 371 aa11.68□□□□□ -0.54
CLSTN3-206ENST00000535668 BTBD1Q9H0C5 482 aa11.68□□□□□ -0.54
CLSTN3-206ENST00000535668 LHX5Q9H2C1 402 aa11.68□□□□□ -0.54
CLSTN3-206ENST00000535668 LRRC4Q9HBW1 653 aa11.68□□□□□ -0.54
CLSTN3-206ENST00000535668 RMND1Q9NWS8 449 aa11.68□□□□□ -0.54
CLSTN3-206ENST00000535668 HESX1Q9UBX0 185 aa11.68□□□□□ -0.54
CLSTN3-206ENST00000535668 EIF2B4Q9UI10 523 aaKnown RBP11.68□□□□□ -0.54
CLSTN3-206ENST00000535668 GGA2Q9UJY4 613 aa11.68□□□□□ -0.54
CLSTN3-206ENST00000535668 LHX6Q9UPM6 363 aa11.68□□□□□ -0.54
CLSTN3-206ENST00000535668 TARSL2A2RTX5 802 aaKnown RBP11.67□□□□□ -0.54
CLSTN3-206ENST00000535668 FBXO21O94952 628 aa11.67□□□□□ -0.54
CLSTN3-206ENST00000535668 SEMA4FO95754 770 aa11.67□□□□□ -0.54
CLSTN3-206ENST00000535668 IGHV4-34P06331 123 aa11.67□□□□□ -0.54
CLSTN3-206ENST00000535668 GRK6P43250 576 aa11.67□□□□□ -0.54
CLSTN3-206ENST00000535668 GCNT1Q02742 428 aa11.67□□□□□ -0.54
CLSTN3-206ENST00000535668 TEAD4Q15561 434 aa11.67□□□□□ -0.54
CLSTN3-206ENST00000535668 KIF19Q2TAC6 998 aa11.67□□□□□ -0.54
CLSTN3-206ENST00000535668 HNRNPA1L2Q32P51 320 aaKnown RBP11.67□□□□□ -0.54
CLSTN3-206ENST00000535668 ZNF658Q5TYW1 1059 aaPredicted RBP11.67□□□□□ -0.54
CLSTN3-206ENST00000535668 SCUBE3Q8IX30 993 aa11.67□□□□□ -0.54
CLSTN3-206ENST00000535668 FMR1NBQ8N0W7 255 aaPredicted RBP11.67□□□□□ -0.54
CLSTN3-206ENST00000535668 ENGASEQ8NFI3 743 aa11.67□□□□□ -0.54
CLSTN3-206ENST00000535668 LMO3Q8TAP4 145 aa11.67□□□□□ -0.54
CLSTN3-206ENST00000535668 RNF139Q8WU17 664 aa11.67□□□□□ -0.54
CLSTN3-206ENST00000535668 BHMTQ93088 406 aa11.67□□□□□ -0.54
CLSTN3-206ENST00000535668 BIRC7Q96CA5 298 aa11.67□□□□□ -0.54
CLSTN3-206ENST00000535668 CIPCQ9C0C6 399 aa11.67□□□□□ -0.54
CLSTN3-206ENST00000535668 CCDC86Q9H6F5 360 aaKnown RBP11.67□□□□□ -0.54
CLSTN3-206ENST00000535668 C6orf106Q9H6K1 298 aaPredicted RBP11.67□□□□□ -0.54
CLSTN3-206ENST00000535668 IL21RQ9HBE5 538 aa11.67□□□□□ -0.54
CLSTN3-206ENST00000535668 METTL14Q9HCE5 456 aaKnown RBP11.67□□□□□ -0.54
CLSTN3-206ENST00000535668 TM9SF3Q9HD45 589 aa11.67□□□□□ -0.54
CLSTN3-206ENST00000535668 FZD4Q9ULV1 537 aa11.67□□□□□ -0.54
CLSTN3-206ENST00000535668 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.67□□□□□ -0.54
CLSTN3-206ENST00000535668 ANKRD6Q9Y2G4 727 aa11.67□□□□□ -0.54
CLSTN3-206ENST00000535668 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.66□□□□□ -0.54
CLSTN3-206ENST00000535668 A0A1W2PPC4 97 aa11.66□□□□□ -0.54
CLSTN3-206ENST00000535668 YKT6O15498 198 aa11.66□□□□□ -0.54
CLSTN3-206ENST00000535668 SART1O43290 800 aaKnown RBP11.66□□□□□ -0.54
CLSTN3-206ENST00000535668 LATO43561 262 aa11.66□□□□□ -0.54
CLSTN3-206ENST00000535668 FYNP06241 537 aa11.66□□□□□ -0.54
CLSTN3-206ENST00000535668 SRPRAP08240 638 aaKnown RBP11.66□□□□□ -0.54
CLSTN3-206ENST00000535668 PRCPP42785 496 aa11.66□□□□□ -0.54
CLSTN3-206ENST00000535668 SLC11A2P49281 568 aa11.66□□□□□ -0.54
CLSTN3-206ENST00000535668 CCR5P51681 352 aa11.66□□□□□ -0.54
CLSTN3-206ENST00000535668 ADIGQ0VDE8 80 aa11.66□□□□□ -0.54
CLSTN3-206ENST00000535668 ACAP1Q15027 740 aa11.66□□□□□ -0.54
CLSTN3-206ENST00000535668 GOLGA7BQ2TAP0 167 aa11.66□□□□□ -0.54
CLSTN3-206ENST00000535668 TTC31Q49AM3 519 aaPredicted RBP11.66□□□□□ -0.54
CLSTN3-206ENST00000535668 MBLAC2Q68D91 279 aa11.66□□□□□ -0.54
CLSTN3-206ENST00000535668 PMF1Q6P1K2 205 aa11.66□□□□□ -0.54
CLSTN3-206ENST00000535668 CHST9Q7L1S5 443 aa11.66□□□□□ -0.54
CLSTN3-206ENST00000535668 SORCS1Q8WY21 1168 aa11.66□□□□□ -0.54
CLSTN3-206ENST00000535668 MRGPRX3Q96LB0 322 aa11.66□□□□□ -0.54
CLSTN3-206ENST00000535668 CEP63Q96MT8 703 aa11.66□□□□□ -0.54
CLSTN3-206ENST00000535668 TIGD1Q96MW7 591 aa11.66□□□□□ -0.54
CLSTN3-206ENST00000535668 IPO9Q96P70 1041 aaKnown RBP11.66□□□□□ -0.54
CLSTN3-206ENST00000535668 DDX50Q9BQ39 737 aaKnown RBP11.66□□□□□ -0.54
CLSTN3-206ENST00000535668 ZSWIM1Q9BR11 485 aa11.66□□□□□ -0.54
CLSTN3-206ENST00000535668 TRIM62Q9BVG3 475 aa11.66□□□□□ -0.54
CLSTN3-206ENST00000535668 GOLPH3LQ9H4A5 285 aa11.66□□□□□ -0.54
CLSTN3-206ENST00000535668 ERVMER34-1Q9H9K5 563 aa11.66□□□□□ -0.54
CLSTN3-206ENST00000535668 ABCB8Q9NUT2 735 aa11.66□□□□□ -0.54
CLSTN3-206ENST00000535668 ARMCX3Q9UH62 379 aaPredicted RBP11.66□□□□□ -0.54
CLSTN3-206ENST00000535668 RALYQ9UKM9 306 aaKnown RBP11.66□□□□□ -0.54
CLSTN3-206ENST00000535668 MAPK8IP1Q9UQF2 711 aa11.66□□□□□ -0.54
CLSTN3-206ENST00000535668 TLR6Q9Y2C9 796 aa11.66□□□□□ -0.54
CLSTN3-206ENST00000535668 SLCO1B1Q9Y6L6 691 aa11.66□□□□□ -0.54
CLSTN3-206ENST00000535668 A0A1B0GTQ1 180 aa11.65□□□□□ -0.54
CLSTN3-206ENST00000535668 A0A1B0GVT2 93 aa11.65□□□□□ -0.54
CLSTN3-206ENST00000535668 ACSL4O60488 711 aa11.65□□□□□ -0.54
CLSTN3-206ENST00000535668 CLSTN1O94985 981 aa11.65□□□□□ -0.54
CLSTN3-206ENST00000535668 IGLV3-25P01717 112 aa11.65□□□□□ -0.54
CLSTN3-206ENST00000535668 HSP90AA1P07900 732 aaKnown RBP11.65□□□□□ -0.54
CLSTN3-206ENST00000535668 ATXN1LP0C7T5 689 aaKnown RBP11.65□□□□□ -0.54
CLSTN3-206ENST00000535668 NUDT1P36639 197 aa11.65□□□□□ -0.54
CLSTN3-206ENST00000535668 PPP1R2P41236 205 aa11.65□□□□□ -0.54
CLSTN3-206ENST00000535668 RXRGP48443 463 aa11.65□□□□□ -0.54
CLSTN3-206ENST00000535668 CSNK1EP49674 416 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms