RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 CCDC66A2RUB6 948 aa12.31□□□□□ -0.44
COMMD9-208ENST00000533643 C19orf67A6NJJ6 358 aa12.31□□□□□ -0.44
COMMD9-208ENST00000533643 C3orf70A6NLC5 250 aaPredicted RBP12.31□□□□□ -0.44
COMMD9-208ENST00000533643 DRGXA6NNA5 263 aa12.31□□□□□ -0.44
COMMD9-208ENST00000533643 E9PAM4 449 aa12.31□□□□□ -0.44
COMMD9-208ENST00000533643 PI4K2BG5E9Z4 385 aa12.31□□□□□ -0.44
COMMD9-208ENST00000533643 CHADO15335 359 aa12.31□□□□□ -0.44
COMMD9-208ENST00000533643 SRGAP2O75044 1071 aa12.31□□□□□ -0.44
COMMD9-208ENST00000533643 ASGR2P07307 311 aa12.31□□□□□ -0.44
COMMD9-208ENST00000533643 CD48P09326 243 aa12.31□□□□□ -0.44
COMMD9-208ENST00000533643 KDELR1P24390 212 aa12.31□□□□□ -0.44
COMMD9-208ENST00000533643 GDI1P31150 447 aa12.31□□□□□ -0.44
COMMD9-208ENST00000533643 CHKAP35790 457 aa12.31□□□□□ -0.44
COMMD9-208ENST00000533643 IFNAR2P48551 515 aa12.31□□□□□ -0.44
COMMD9-208ENST00000533643 SGSHP51688 502 aa12.31□□□□□ -0.44
COMMD9-208ENST00000533643 VCPP55072 806 aaKnown RBP12.31□□□□□ -0.44
COMMD9-208ENST00000533643 CDH6P55285 790 aa12.31□□□□□ -0.44
COMMD9-208ENST00000533643 PDGFRLQ15198 375 aa12.31□□□□□ -0.44
COMMD9-208ENST00000533643 RPS6KA1Q15418 735 aa12.31□□□□□ -0.44
COMMD9-208ENST00000533643 C5orf22Q49AR2 442 aa12.31□□□□□ -0.44
COMMD9-208ENST00000533643 PPP6R3Q5H9R7 873 aaPredicted RBP12.31□□□□□ -0.44
COMMD9-208ENST00000533643 MANEALQ5VSG8 457 aa12.31□□□□□ -0.44
COMMD9-208ENST00000533643 TRIM68Q6AZZ1 485 aa12.31□□□□□ -0.44
COMMD9-208ENST00000533643 FBXL22Q6P050 247 aa12.31□□□□□ -0.44
COMMD9-208ENST00000533643 RHBDF2Q6PJF5 856 aa12.31□□□□□ -0.44
COMMD9-208ENST00000533643 NYAP1Q6ZVC0 841 aa12.31□□□□□ -0.44
COMMD9-208ENST00000533643 TMEM25Q86YD3 366 aa12.31□□□□□ -0.44
COMMD9-208ENST00000533643 SLC44A3Q8N4M1 653 aa12.31□□□□□ -0.44
COMMD9-208ENST00000533643 KCTD6Q8NC69 237 aa12.31□□□□□ -0.44
COMMD9-208ENST00000533643 TSC1Q92574 1164 aa12.31□□□□□ -0.44
COMMD9-208ENST00000533643 IGSF8Q969P0 613 aa12.31□□□□□ -0.44
COMMD9-208ENST00000533643 TRMT61BQ9BVS5 477 aaKnown RBP12.31□□□□□ -0.44
COMMD9-208ENST00000533643 TLR10Q9BXR5 811 aa12.31□□□□□ -0.44
COMMD9-208ENST00000533643 PCDH18Q9HCL0 1135 aa12.31□□□□□ -0.44
COMMD9-208ENST00000533643 SPHK2Q9NRA0 654 aa12.31□□□□□ -0.44
COMMD9-208ENST00000533643 IGSF9Q9P2J2 1179 aa12.31□□□□□ -0.44
COMMD9-208ENST00000533643 VANGL2Q9ULK5 521 aa12.31□□□□□ -0.44
COMMD9-208ENST00000533643 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.31□□□□□ -0.44
COMMD9-208ENST00000533643 JRKLQ9Y4A0 524 aa12.31□□□□□ -0.44
COMMD9-208ENST00000533643 IGLV3-10A0A075B6K4 115 aa12.3□□□□□ -0.44
COMMD9-208ENST00000533643 F5H5T6 163 aa12.3□□□□□ -0.44
COMMD9-208ENST00000533643 ENC1O14682 589 aa12.3□□□□□ -0.44
COMMD9-208ENST00000533643 CREB3O43889 395 aa12.3□□□□□ -0.44
COMMD9-208ENST00000533643 LRIG2O94898 1065 aa12.3□□□□□ -0.44
COMMD9-208ENST00000533643 KRT1P04264 644 aa12.3□□□□□ -0.44
COMMD9-208ENST00000533643 IL4RP24394 825 aa12.3□□□□□ -0.44
COMMD9-208ENST00000533643 MSNP26038 577 aaKnown RBP12.3□□□□□ -0.44
COMMD9-208ENST00000533643 HCAR3P49019 387 aa12.3□□□□□ -0.44
COMMD9-208ENST00000533643 DNA2P51530 1060 aa12.3□□□□□ -0.44
COMMD9-208ENST00000533643 IRAK1P51617 712 aa12.3□□□□□ -0.44
COMMD9-208ENST00000533643 RWDD2BP57060 319 aa12.3□□□□□ -0.44
COMMD9-208ENST00000533643 ETF1P62495 437 aaKnown RBP12.3□□□□□ -0.44
COMMD9-208ENST00000533643 RPS24P62847 133 aaKnown RBP12.3□□□□□ -0.44
COMMD9-208ENST00000533643 TNK2Q07912 1038 aa12.3□□□□□ -0.44
COMMD9-208ENST00000533643 DPYSL3Q14195 570 aa12.3□□□□□ -0.44
COMMD9-208ENST00000533643 KRT81Q14533 505 aa12.3□□□□□ -0.44
COMMD9-208ENST00000533643 PDK2Q15119 407 aa12.3□□□□□ -0.44
COMMD9-208ENST00000533643 DHCR24Q15392 516 aa12.3□□□□□ -0.44
COMMD9-208ENST00000533643 ZFYVE27Q5T4F4 411 aa12.3□□□□□ -0.44
COMMD9-208ENST00000533643 MFSD7Q6UXD7 560 aa12.3□□□□□ -0.44
COMMD9-208ENST00000533643 LRRC31Q6UY01 552 aa12.3□□□□□ -0.44
COMMD9-208ENST00000533643 TPGS1Q6ZTW0 290 aa12.3□□□□□ -0.44
COMMD9-208ENST00000533643 RCOR2Q8IZ40 523 aa12.3□□□□□ -0.44
COMMD9-208ENST00000533643 CFAP52Q8N1V2 620 aa12.3□□□□□ -0.44
COMMD9-208ENST00000533643 UBL4BQ8N7F7 174 aa12.3□□□□□ -0.44
COMMD9-208ENST00000533643 EXD1Q8NHP7 514 aa12.3□□□□□ -0.44
COMMD9-208ENST00000533643 IRF7Q92985 503 aa12.3□□□□□ -0.44
COMMD9-208ENST00000533643 ATP2A3Q93084 1043 aa12.3□□□□□ -0.44
COMMD9-208ENST00000533643 TMA16Q96EY4 203 aaKnown RBP12.3□□□□□ -0.44
COMMD9-208ENST00000533643 PRICKLE1Q96MT3 831 aaPredicted RBP12.3□□□□□ -0.44
COMMD9-208ENST00000533643 RPRD1AQ96P16 312 aaPredicted RBP12.3□□□□□ -0.44
COMMD9-208ENST00000533643 EPAS1Q99814 870 aa12.3□□□□□ -0.44
COMMD9-208ENST00000533643 EBF3Q9H4W6 596 aa12.3□□□□□ -0.44
COMMD9-208ENST00000533643 HPS4Q9NQG7 708 aa12.3□□□□□ -0.44
COMMD9-208ENST00000533643 CWC15Q9P013 229 aaKnown RBP12.3□□□□□ -0.44
COMMD9-208ENST00000533643 NEU3Q9UQ49 428 aa12.3□□□□□ -0.44
COMMD9-208ENST00000533643 LRRD1A4D1F6 860 aa12.29□□□□□ -0.44
COMMD9-208ENST00000533643 OTOL1A6NHN0 477 aaPredicted RBP12.29□□□□□ -0.44
COMMD9-208ENST00000533643 H3BRJ5 948 aa12.29□□□□□ -0.44
COMMD9-208ENST00000533643 ARNTLO00327 626 aa12.29□□□□□ -0.44
COMMD9-208ENST00000533643 EEF2KO00418 725 aaKnown RBP12.29□□□□□ -0.44
COMMD9-208ENST00000533643 FANCGO15287 622 aa12.29□□□□□ -0.44
COMMD9-208ENST00000533643 CNTN5O94779 1100 aa12.29□□□□□ -0.44
COMMD9-208ENST00000533643 ZRANB2O95218 330 aaKnown RBP eCLIP12.29□□□□□ -0.44
COMMD9-208ENST00000533643 NFATC1O95644 943 aa12.29□□□□□ -0.44
COMMD9-208ENST00000533643 ATP1A1P05023 1023 aaKnown RBP12.29□□□□□ -0.44
COMMD9-208ENST00000533643 CYP17A1P05093 508 aa12.29□□□□□ -0.44
COMMD9-208ENST00000533643 PYGMP11217 842 aa12.29□□□□□ -0.44
COMMD9-208ENST00000533643 GOT1P17174 413 aa12.29□□□□□ -0.44
COMMD9-208ENST00000533643 HOXC13P31276 330 aa12.29□□□□□ -0.44
COMMD9-208ENST00000533643 HTR7P34969 479 aa12.29□□□□□ -0.44
COMMD9-208ENST00000533643 ZNF135P52742 658 aaPredicted RBP12.29□□□□□ -0.44
COMMD9-208ENST00000533643 MMRN1Q13201 1228 aa12.29□□□□□ -0.44
COMMD9-208ENST00000533643 DPYSQ14117 519 aa12.29□□□□□ -0.44
COMMD9-208ENST00000533643 TAZQ16635 292 aa12.29□□□□□ -0.44
COMMD9-208ENST00000533643 MPPE1Q53F39 396 aa12.29□□□□□ -0.44
COMMD9-208ENST00000533643 RABGAP1LQ5R372 815 aa12.29□□□□□ -0.44
COMMD9-208ENST00000533643 LY6G5CQ5SRR4 150 aa12.29□□□□□ -0.44
COMMD9-208ENST00000533643 DCAF12L1Q5VU92 463 aa12.29□□□□□ -0.44
COMMD9-208ENST00000533643 FYB2Q5VWT5 728 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms