RNA–Protein interactions for RNA: ENST00000533628.5

RPUSD4-208, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene RPUSD4, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-208ENST00000533628 MIPP30301 263 aa13.16□□□□□ -0.3
RPUSD4-208ENST00000533628 PCK1P35558 622 aa13.16□□□□□ -0.3
RPUSD4-208ENST00000533628 OPRD1P41143 372 aa13.16□□□□□ -0.3
RPUSD4-208ENST00000533628 STARD6P59095 220 aa13.16□□□□□ -0.3
RPUSD4-208ENST00000533628 KRT83P78385 493 aa13.16□□□□□ -0.3
RPUSD4-208ENST00000533628 PRKCQQ04759 706 aa13.16□□□□□ -0.3
RPUSD4-208ENST00000533628 GAD2Q05329 585 aa13.16□□□□□ -0.3
RPUSD4-208ENST00000533628 C5orf22Q49AR2 442 aa13.16□□□□□ -0.3
RPUSD4-208ENST00000533628 RAP1GAP2Q684P5 730 aa13.16□□□□□ -0.3
RPUSD4-208ENST00000533628 NAIF1Q69YI7 327 aaPredicted RBP13.16□□□□□ -0.3
RPUSD4-208ENST00000533628 TRIM67Q6ZTA4 783 aa13.16□□□□□ -0.3
RPUSD4-208ENST00000533628 TPGS1Q6ZTW0 290 aa13.16□□□□□ -0.3
RPUSD4-208ENST00000533628 RALGPS2Q86X27 583 aaPredicted RBP13.16□□□□□ -0.3
RPUSD4-208ENST00000533628 ZNF687Q8N1G0 1237 aa13.16□□□□□ -0.3
RPUSD4-208ENST00000533628 LUC7LQ9NQ29 371 aaKnown RBP13.16□□□□□ -0.3
RPUSD4-208ENST00000533628 ARHGEF3Q9NR81 526 aa13.16□□□□□ -0.3
RPUSD4-208ENST00000533628 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.16□□□□□ -0.3
RPUSD4-208ENST00000533628 FBXO10Q9UK96 956 aa13.16□□□□□ -0.3
RPUSD4-208ENST00000533628 FZD10Q9ULW2 581 aa13.16□□□□□ -0.3
RPUSD4-208ENST00000533628 DUSP10Q9Y6W6 482 aa13.16□□□□□ -0.3
RPUSD4-208ENST00000533628 TTC28Q96AY4 2481 aa13.16□□□□□ -0.3
RPUSD4-208ENST00000533628 BDP1A6H8Y1 2624 aa13.16□□□□□ -0.3
RPUSD4-208ENST00000533628 NRDCO43847 1150 aa13.16□□□□□ -0.3
RPUSD4-208ENST00000533628 TSPAN3O60637 253 aa13.16□□□□□ -0.3
RPUSD4-208ENST00000533628 TCF4P15884 667 aa13.16□□□□□ -0.3
RPUSD4-208ENST00000533628 NR1H3Q13133 447 aa13.16□□□□□ -0.3
RPUSD4-208ENST00000533628 AUHQ13825 339 aaKnown RBP13.16□□□□□ -0.3
RPUSD4-208ENST00000533628 MPPE1Q53F39 396 aa13.16□□□□□ -0.3
RPUSD4-208ENST00000533628 FBXL22Q6P050 247 aa13.16□□□□□ -0.3
RPUSD4-208ENST00000533628 PHTF2Q8N3S3 785 aa13.16□□□□□ -0.3
RPUSD4-208ENST00000533628 MSANTD3Q96H12 275 aa13.16□□□□□ -0.3
RPUSD4-208ENST00000533628 DDX50Q9BQ39 737 aaKnown RBP13.16□□□□□ -0.3
RPUSD4-208ENST00000533628 OSBPL2Q9H1P3 480 aa13.16□□□□□ -0.3
RPUSD4-208ENST00000533628 EPHX3Q9H6B9 360 aa13.16□□□□□ -0.3
RPUSD4-208ENST00000533628 MUC3AQ02505 3323 aa13.15□□□□□ -0.3
RPUSD4-208ENST00000533628 TRIOO75962 3097 aa13.15□□□□□ -0.3
RPUSD4-208ENST00000533628 CACNG3O60359 315 aa13.15□□□□□ -0.3
RPUSD4-208ENST00000533628 IPO7O95373 1038 aaKnown RBP13.15□□□□□ -0.3
RPUSD4-208ENST00000533628 TYRP14679 529 aa13.15□□□□□ -0.3
RPUSD4-208ENST00000533628 IL1R2P27930 398 aa13.15□□□□□ -0.3
RPUSD4-208ENST00000533628 HOXD9P28356 352 aaPredicted RBP13.15□□□□□ -0.3
RPUSD4-208ENST00000533628 GGCXP38435 758 aa13.15□□□□□ -0.3
RPUSD4-208ENST00000533628 ARHGAP25P42331 645 aa13.15□□□□□ -0.3
RPUSD4-208ENST00000533628 SLC6A11P48066 632 aa13.15□□□□□ -0.3
RPUSD4-208ENST00000533628 IRAK1P51617 712 aa13.15□□□□□ -0.3
RPUSD4-208ENST00000533628 NRG1Q02297 640 aaPredicted RBP13.15□□□□□ -0.3
RPUSD4-208ENST00000533628 MPP7Q5T2T1 576 aa13.15□□□□□ -0.3
RPUSD4-208ENST00000533628 MANEALQ5VSG8 457 aa13.15□□□□□ -0.3
RPUSD4-208ENST00000533628 ICE2Q659A1 982 aa13.15□□□□□ -0.3
RPUSD4-208ENST00000533628 TPRG1Q6ZUI0 275 aa13.15□□□□□ -0.3
RPUSD4-208ENST00000533628 SLFN11Q7Z7L1 901 aa13.15□□□□□ -0.3
RPUSD4-208ENST00000533628 CHSY1Q86X52 802 aa13.15□□□□□ -0.3
RPUSD4-208ENST00000533628 LGI2Q8N0V4 545 aa13.15□□□□□ -0.3
RPUSD4-208ENST00000533628 SIX5Q8N196 739 aa13.15□□□□□ -0.3
RPUSD4-208ENST00000533628 IGSF8Q969P0 613 aa13.15□□□□□ -0.3
RPUSD4-208ENST00000533628 TMA16Q96EY4 203 aaKnown RBP13.15□□□□□ -0.3
RPUSD4-208ENST00000533628 MYCBPQ99417 103 aaPredicted RBP13.15□□□□□ -0.3
RPUSD4-208ENST00000533628 NCAPGQ9BPX3 1015 aa13.15□□□□□ -0.3
RPUSD4-208ENST00000533628 BBS2Q9BXC9 721 aa13.15□□□□□ -0.3
RPUSD4-208ENST00000533628 FBRSL1Q9HCM7 1045 aaKnown RBP13.15□□□□□ -0.3
RPUSD4-208ENST00000533628 FBXL21Q9UKT6 434 aa13.15□□□□□ -0.3
RPUSD4-208ENST00000533628 CLEC4EQ9ULY5 219 aa13.15□□□□□ -0.3
RPUSD4-208ENST00000533628 TECTAO75443 2155 aa13.15□□□□□ -0.3
RPUSD4-208ENST00000533628 IGLV3-10A0A075B6K4 115 aa13.14□□□□□ -0.31
RPUSD4-208ENST00000533628 DRGXA6NNA5 263 aa13.14□□□□□ -0.31
RPUSD4-208ENST00000533628 NEDD8-MDP1E9PL57 170 aa13.14□□□□□ -0.31
RPUSD4-208ENST00000533628 FAM72CH0Y354 149 aa13.14□□□□□ -0.31
RPUSD4-208ENST00000533628 RNF8O76064 485 aa13.14□□□□□ -0.31
RPUSD4-208ENST00000533628 CISD3P0C7P0 127 aa13.14□□□□□ -0.31
RPUSD4-208ENST00000533628 MAN1A1P33908 653 aa13.14□□□□□ -0.31
RPUSD4-208ENST00000533628 GTF2A1P52655 376 aaPredicted RBP13.14□□□□□ -0.31
RPUSD4-208ENST00000533628 AIF1P55008 147 aa13.14□□□□□ -0.31
RPUSD4-208ENST00000533628 RPS24P62847 133 aaKnown RBP13.14□□□□□ -0.31
RPUSD4-208ENST00000533628 SLC25A11Q02978 314 aaKnown RBP13.14□□□□□ -0.31
RPUSD4-208ENST00000533628 MESP2Q0VG99 397 aa13.14□□□□□ -0.31
RPUSD4-208ENST00000533628 ANO4Q32M45 955 aa13.14□□□□□ -0.31
RPUSD4-208ENST00000533628 ACBD5Q5T8D3 534 aaPredicted RBP13.14□□□□□ -0.31
RPUSD4-208ENST00000533628 FAM72AQ5TYM5 149 aa13.14□□□□□ -0.31
RPUSD4-208ENST00000533628 TXNRD3NBQ6F5E7 133 aa13.14□□□□□ -0.31
RPUSD4-208ENST00000533628 FAM72DQ6L9T8 149 aa13.14□□□□□ -0.31
RPUSD4-208ENST00000533628 SCYL2Q6P3W7 929 aa13.14□□□□□ -0.31
RPUSD4-208ENST00000533628 FAM72BQ86X60 149 aa13.14□□□□□ -0.31
RPUSD4-208ENST00000533628 SIK2Q9H0K1 926 aa13.14□□□□□ -0.31
RPUSD4-208ENST00000533628 PLK2Q9NYY3 685 aa13.14□□□□□ -0.31
RPUSD4-208ENST00000533628 LCMT1Q9UIC8 334 aa13.14□□□□□ -0.31
RPUSD4-208ENST00000533628 NEU3Q9UQ49 428 aa13.14□□□□□ -0.31
RPUSD4-208ENST00000533628 KIAA1549LQ6ZVL6 1849 aa13.14□□□□□ -0.31
RPUSD4-208ENST00000533628 EIF2DP41214 584 aaKnown RBP13.14□□□□□ -0.31
RPUSD4-208ENST00000533628 GALK1P51570 392 aa13.14□□□□□ -0.31
RPUSD4-208ENST00000533628 SEMA3BQ13214 749 aa13.14□□□□□ -0.31
RPUSD4-208ENST00000533628 MESDQ14696 234 aa13.14□□□□□ -0.31
RPUSD4-208ENST00000533628 CA9Q16790 459 aa13.14□□□□□ -0.31
RPUSD4-208ENST00000533628 ARL13BQ3SXY8 428 aa13.14□□□□□ -0.31
RPUSD4-208ENST00000533628 ASTLQ6HA08 431 aaPredicted RBP13.14□□□□□ -0.31
RPUSD4-208ENST00000533628 CFAP52Q8N1V2 620 aa13.14□□□□□ -0.31
RPUSD4-208ENST00000533628 PYROXD2Q8N2H3 581 aa13.14□□□□□ -0.31
RPUSD4-208ENST00000533628 EZH1Q92800 747 aaPredicted RBP13.14□□□□□ -0.31
RPUSD4-208ENST00000533628 ZBTB9Q96C00 473 aa13.14□□□□□ -0.31
RPUSD4-208ENST00000533628 LMLNQ96KR4 655 aa13.14□□□□□ -0.31
RPUSD4-208ENST00000533628 SNRNP25Q9BV90 132 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms