RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 DQX1Q8TE96 717 aaKnown RBP12.89□□□□□ -0.35
CAPRIN1-213ENST00000533562 CYB5D2Q8WUJ1 264 aa12.89□□□□□ -0.35
CAPRIN1-213ENST00000533562 DNASE2BQ8WZ79 361 aa12.89□□□□□ -0.35
CAPRIN1-213ENST00000533562 CRACR2AQ9BSW2 395 aa12.89□□□□□ -0.35
CAPRIN1-213ENST00000533562 SLC4A5Q9BY07 1137 aa12.89□□□□□ -0.35
CAPRIN1-213ENST00000533562 ZDHHC5Q9C0B5 715 aa12.89□□□□□ -0.35
CAPRIN1-213ENST00000533562 CD93Q9NPY3 652 aa12.89□□□□□ -0.35
CAPRIN1-213ENST00000533562 STIM2Q9P246 746 aa12.89□□□□□ -0.35
CAPRIN1-213ENST00000533562 NAALADL1Q9UQQ1 740 aa12.89□□□□□ -0.35
CAPRIN1-213ENST00000533562 TNRC6BQ9UPQ9 1833 aaKnown RBP12.89□□□□□ -0.35
CAPRIN1-213ENST00000533562 A0A1B0GTW7 788 aa12.88□□□□□ -0.35
CAPRIN1-213ENST00000533562 GTPBP10A4D1E9 387 aaKnown RBP12.88□□□□□ -0.35
CAPRIN1-213ENST00000533562 METTL12A8MUP2 240 aa12.88□□□□□ -0.35
CAPRIN1-213ENST00000533562 KCNJ18B7U540 433 aa12.88□□□□□ -0.35
CAPRIN1-213ENST00000533562 HLA-EP13747 358 aa12.88□□□□□ -0.35
CAPRIN1-213ENST00000533562 MAOBP27338 520 aa12.88□□□□□ -0.35
CAPRIN1-213ENST00000533562 SLC6A4P31645 630 aa12.88□□□□□ -0.35
CAPRIN1-213ENST00000533562 RDXP35241 583 aaKnown RBP12.88□□□□□ -0.35
CAPRIN1-213ENST00000533562 SGSHP51688 502 aa12.88□□□□□ -0.35
CAPRIN1-213ENST00000533562 SNX16P57768 344 aa12.88□□□□□ -0.35
CAPRIN1-213ENST00000533562 ST8SIA6P61647 398 aa12.88□□□□□ -0.35
CAPRIN1-213ENST00000533562 ZBTB16Q05516 673 aa12.88□□□□□ -0.35
CAPRIN1-213ENST00000533562 SLC14A1Q13336 389 aa12.88□□□□□ -0.35
CAPRIN1-213ENST00000533562 HNRNPDQ14103 355 aaKnown RBP12.88□□□□□ -0.35
CAPRIN1-213ENST00000533562 ST3GAL2Q16842 350 aa12.88□□□□□ -0.35
CAPRIN1-213ENST00000533562 TPD52L1Q16890 204 aaPredicted RBP12.88□□□□□ -0.35
CAPRIN1-213ENST00000533562 EXOC3L4Q17RC7 722 aa12.88□□□□□ -0.35
CAPRIN1-213ENST00000533562 SMYD5Q6GMV2 418 aa12.88□□□□□ -0.35
CAPRIN1-213ENST00000533562 SLC39A13Q96H72 371 aa12.88□□□□□ -0.35
CAPRIN1-213ENST00000533562 FCRL2Q96LA5 508 aaPredicted RBP12.88□□□□□ -0.35
CAPRIN1-213ENST00000533562 PCED1AQ9H1Q7 454 aa12.88□□□□□ -0.35
CAPRIN1-213ENST00000533562 THAP9Q9H5L6 903 aa12.88□□□□□ -0.35
CAPRIN1-213ENST00000533562 POPDC2Q9HBU9 364 aa12.88□□□□□ -0.35
CAPRIN1-213ENST00000533562 FSCN3Q9NQT6 498 aa12.88□□□□□ -0.35
CAPRIN1-213ENST00000533562 DNAAF2Q9NVR5 837 aaKnown RBP12.88□□□□□ -0.35
CAPRIN1-213ENST00000533562 APEX2Q9UBZ4 518 aa12.88□□□□□ -0.35
CAPRIN1-213ENST00000533562 SLC12A6Q9UHW9 1150 aa12.88□□□□□ -0.35
CAPRIN1-213ENST00000533562 E5RJQ4 531 aa12.87□□□□□ -0.35
CAPRIN1-213ENST00000533562 PAPSS1O43252 624 aaPredicted RBP12.87□□□□□ -0.35
CAPRIN1-213ENST00000533562 ABCB7O75027 752 aa12.87□□□□□ -0.35
CAPRIN1-213ENST00000533562 MOCS3O95396 460 aa12.87□□□□□ -0.35
CAPRIN1-213ENST00000533562 APOEP02649 317 aa12.87□□□□□ -0.35
CAPRIN1-213ENST00000533562 SLC9A1P19634 815 aa12.87□□□□□ -0.35
CAPRIN1-213ENST00000533562 CD70P32970 193 aa12.87□□□□□ -0.35
CAPRIN1-213ENST00000533562 MTIF2P46199 727 aaKnown RBP12.87□□□□□ -0.35
CAPRIN1-213ENST00000533562 SFSWAPQ12872 951 aaKnown RBP12.87□□□□□ -0.35
CAPRIN1-213ENST00000533562 FOXC1Q12948 553 aa12.87□□□□□ -0.35
CAPRIN1-213ENST00000533562 PTPRNQ16849 979 aa12.87□□□□□ -0.35
CAPRIN1-213ENST00000533562 ARHGAP44Q17R89 818 aa12.87□□□□□ -0.35
CAPRIN1-213ENST00000533562 MS4A13Q5J8X5 152 aa12.87□□□□□ -0.35
CAPRIN1-213ENST00000533562 DCAF12L1Q5VU92 463 aa12.87□□□□□ -0.35
CAPRIN1-213ENST00000533562 SYPL2Q5VXT5 272 aa12.87□□□□□ -0.35
CAPRIN1-213ENST00000533562 NADSYN1Q6IA69 706 aa12.87□□□□□ -0.35
CAPRIN1-213ENST00000533562 PIP4P1Q86T03 277 aa12.87□□□□□ -0.35
CAPRIN1-213ENST00000533562 FAM124AQ86V42 546 aa12.87□□□□□ -0.35
CAPRIN1-213ENST00000533562 CARNMT1Q8N4J0 409 aa12.87□□□□□ -0.35
CAPRIN1-213ENST00000533562 ADAM32Q8TC27 787 aa12.87□□□□□ -0.35
CAPRIN1-213ENST00000533562 TTC17Q96AE7 1141 aa12.87□□□□□ -0.35
CAPRIN1-213ENST00000533562 MIR1-1HGQ9H1L0 117 aa12.87□□□□□ -0.35
CAPRIN1-213ENST00000533562 LHX5Q9H2C1 402 aa12.87□□□□□ -0.35
CAPRIN1-213ENST00000533562 PRSS16Q9NQE7 514 aa12.87□□□□□ -0.35
CAPRIN1-213ENST00000533562 CHMP5Q9NZZ3 219 aa12.87□□□□□ -0.35
CAPRIN1-213ENST00000533562 TJP2Q9UDY2 1190 aa12.87□□□□□ -0.35
CAPRIN1-213ENST00000533562 CKAP5Q14008 2032 aa12.87□□□□□ -0.35
CAPRIN1-213ENST00000533562 CHD6Q8TD26 2715 aa12.86□□□□□ -0.35
CAPRIN1-213ENST00000533562 H0Y626 953 aa12.86□□□□□ -0.35
CAPRIN1-213ENST00000533562 BCAT2O15382 392 aaPredicted RBP12.86□□□□□ -0.35
CAPRIN1-213ENST00000533562 RNASEH1O60930 286 aaKnown RBP12.86□□□□□ -0.35
CAPRIN1-213ENST00000533562 TRUB2O95900 331 aaKnown RBP12.86□□□□□ -0.35
CAPRIN1-213ENST00000533562 MOCS2O96007 188 aaPredicted RBP12.86□□□□□ -0.35
CAPRIN1-213ENST00000533562 DNTTP04053 509 aa12.86□□□□□ -0.35
CAPRIN1-213ENST00000533562 ASLP04424 464 aa12.86□□□□□ -0.35
CAPRIN1-213ENST00000533562 GLI1P08151 1106 aa12.86□□□□□ -0.35
CAPRIN1-213ENST00000533562 C7P10643 843 aa12.86□□□□□ -0.35
CAPRIN1-213ENST00000533562 SLC2A3P11169 496 aa12.86□□□□□ -0.35
CAPRIN1-213ENST00000533562 PON1P27169 355 aa12.86□□□□□ -0.35
CAPRIN1-213ENST00000533562 RPS24P62847 133 aaKnown RBP12.86□□□□□ -0.35
CAPRIN1-213ENST00000533562 CDK17Q00537 523 aa12.86□□□□□ -0.35
CAPRIN1-213ENST00000533562 PTK2Q05397 1052 aa12.86□□□□□ -0.35
CAPRIN1-213ENST00000533562 PDCLQ13371 301 aa12.86□□□□□ -0.35
CAPRIN1-213ENST00000533562 CDH18Q13634 790 aa12.86□□□□□ -0.35
CAPRIN1-213ENST00000533562 ZC3H12AQ5D1E8 599 aaKnown RBP12.86□□□□□ -0.35
CAPRIN1-213ENST00000533562 EFHC1Q5JVL4 640 aa12.86□□□□□ -0.35
CAPRIN1-213ENST00000533562 GJB7Q6PEY0 223 aa12.86□□□□□ -0.35
CAPRIN1-213ENST00000533562 IL27RAQ6UWB1 636 aa12.86□□□□□ -0.35
CAPRIN1-213ENST00000533562 TAC4Q86UU9 113 aa12.86□□□□□ -0.35
CAPRIN1-213ENST00000533562 CACUL1Q86Y37 369 aa12.86□□□□□ -0.35
CAPRIN1-213ENST00000533562 FAM114A1Q8IWE2 563 aa12.86□□□□□ -0.35
CAPRIN1-213ENST00000533562 ZNF366Q8N895 744 aa12.86□□□□□ -0.35
CAPRIN1-213ENST00000533562 ATP6V0D2Q8N8Y2 350 aa12.86□□□□□ -0.35
CAPRIN1-213ENST00000533562 KDM1BQ8NB78 822 aa12.86□□□□□ -0.35
CAPRIN1-213ENST00000533562 WFDC5Q8TCV5 224 aa12.86□□□□□ -0.35
CAPRIN1-213ENST00000533562 BTN2A3PQ96KV6 586 aa12.86□□□□□ -0.35
CAPRIN1-213ENST00000533562 NOX5Q96PH1 765 aa12.86□□□□□ -0.35
CAPRIN1-213ENST00000533562 BTBD1Q9H0C5 482 aa12.86□□□□□ -0.35
CAPRIN1-213ENST00000533562 ACP6Q9NPH0 428 aa12.86□□□□□ -0.35
CAPRIN1-213ENST00000533562 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.86□□□□□ -0.35
CAPRIN1-213ENST00000533562 KIAA1522Q9P206 1035 aaPredicted RBP12.86□□□□□ -0.35
CAPRIN1-213ENST00000533562 CYTH4Q9UIA0 394 aa12.86□□□□□ -0.35
CAPRIN1-213ENST00000533562 SCML1Q9UN30 329 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms