RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 TBC1D3BA6NDS4 549 aa3.08□□□□□ -1.92
ATM-220ENST00000533526 TBC1D3FA6NER0 549 aaPredicted RBP3.08□□□□□ -1.92
ATM-220ENST00000533526 C2CD4BA6NLJ0 364 aa3.08□□□□□ -1.92
ATM-220ENST00000533526 AQP12BA6NM10 295 aa3.08□□□□□ -1.92
ATM-220ENST00000533526 TBC1D3LB9A6J9 549 aa3.08□□□□□ -1.92
ATM-220ENST00000533526 F5H423 210 aaPredicted RBP3.08□□□□□ -1.92
ATM-220ENST00000533526 SYT5O00445 386 aa3.08□□□□□ -1.92
ATM-220ENST00000533526 RPP40O75818 363 aaKnown RBP3.08□□□□□ -1.92
ATM-220ENST00000533526 BMP15O95972 392 aa3.08□□□□□ -1.92
ATM-220ENST00000533526 CSTBP04080 98 aaKnown RBP3.08□□□□□ -1.92
ATM-220ENST00000533526 TBC1D3HP0C7X1 549 aa3.08□□□□□ -1.92
ATM-220ENST00000533526 ST6GAL1P15907 406 aa3.08□□□□□ -1.92
ATM-220ENST00000533526 IGFBP2P18065 325 aa3.08□□□□□ -1.92
ATM-220ENST00000533526 TGM2P21980 687 aa3.08□□□□□ -1.92
ATM-220ENST00000533526 KLRK1P26718 216 aa3.08□□□□□ -1.92
ATM-220ENST00000533526 AKT1P31749 480 aa3.08□□□□□ -1.92
ATM-220ENST00000533526 SERPINF1P36955 418 aa3.08□□□□□ -1.92
ATM-220ENST00000533526 ME1P48163 572 aa3.08□□□□□ -1.92
ATM-220ENST00000533526 RHBDL3P58872 404 aa3.08□□□□□ -1.92
ATM-220ENST00000533526 AP2B1P63010 937 aa3.08□□□□□ -1.92
ATM-220ENST00000533526 B4GALNT1Q00973 533 aa3.08□□□□□ -1.92
ATM-220ENST00000533526 SRSF1Q07955 248 aaKnown RBP eCLIP3.08□□□□□ -1.92
ATM-220ENST00000533526 FOXO1Q12778 655 aa3.08□□□□□ -1.92
ATM-220ENST00000533526 CHAF1AQ13111 956 aaPredicted RBP3.08□□□□□ -1.92
ATM-220ENST00000533526 BIRC2Q13490 618 aa3.08□□□□□ -1.92
ATM-220ENST00000533526 BLMHQ13867 455 aa3.08□□□□□ -1.92
ATM-220ENST00000533526 RABEP1Q15276 862 aa3.08□□□□□ -1.92
ATM-220ENST00000533526 LIPMQ5VYY2 423 aa3.08□□□□□ -1.92
ATM-220ENST00000533526 PAPD7Q5XG87 772 aaKnown RBP3.08□□□□□ -1.92
ATM-220ENST00000533526 TBC1D3GQ6DHY5 549 aa3.08□□□□□ -1.92
ATM-220ENST00000533526 TBC1D3CQ6IPX1 549 aa3.08□□□□□ -1.92
ATM-220ENST00000533526 ERAP2Q6P179 960 aa3.08□□□□□ -1.92
ATM-220ENST00000533526 KLHL17Q6TDP4 642 aa3.08□□□□□ -1.92
ATM-220ENST00000533526 RHPN2Q8IUC4 686 aa3.08□□□□□ -1.92
ATM-220ENST00000533526 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.08□□□□□ -1.92
ATM-220ENST00000533526 ADGRF4Q8IZF3 695 aa3.08□□□□□ -1.92
ATM-220ENST00000533526 TBC1D3Q8IZP1 549 aaPredicted RBP3.08□□□□□ -1.92
ATM-220ENST00000533526 ENAHQ8N8S7 591 aaPredicted RBP3.08□□□□□ -1.92
ATM-220ENST00000533526 STYXQ8WUJ0 223 aa3.08□□□□□ -1.92
ATM-220ENST00000533526 HMGB4Q8WW32 186 aa3.08□□□□□ -1.92
ATM-220ENST00000533526 LTV1Q96GA3 475 aaPredicted RBP3.08□□□□□ -1.92
ATM-220ENST00000533526 GPR78Q96P69 363 aa3.08□□□□□ -1.92
ATM-220ENST00000533526 RTKNQ9BST9 563 aa3.08□□□□□ -1.92
ATM-220ENST00000533526 CRB3Q9BUF7 120 aa3.08□□□□□ -1.92
ATM-220ENST00000533526 HTATIP2Q9BUP3 242 aa3.08□□□□□ -1.92
ATM-220ENST00000533526 BRD8Q9H0E9 1235 aa3.08□□□□□ -1.92
ATM-220ENST00000533526 MLXIPQ9HAP2 919 aa3.08□□□□□ -1.92
ATM-220ENST00000533526 PAPOLBQ9NRJ5 636 aaKnown RBP3.08□□□□□ -1.92
ATM-220ENST00000533526 TMEM184CQ9NVA4 438 aa3.08□□□□□ -1.92
ATM-220ENST00000533526 TMEM45AQ9NWC5 275 aa3.08□□□□□ -1.92
ATM-220ENST00000533526 HS3ST3B1Q9Y662 390 aa3.08□□□□□ -1.92
ATM-220ENST00000533526 SLC22A23A1A5C7 686 aa3.07□□□□□ -1.92
ATM-220ENST00000533526 DPPA5A6NC42 116 aa3.07□□□□□ -1.92
ATM-220ENST00000533526 MBD3L5A6NJ08 208 aaPredicted RBP3.07□□□□□ -1.92
ATM-220ENST00000533526 PPP6R2O75170 966 aa3.07□□□□□ -1.92
ATM-220ENST00000533526 CNTN5O94779 1100 aa3.07□□□□□ -1.92
ATM-220ENST00000533526 ACTL6BO94805 426 aa3.07□□□□□ -1.92
ATM-220ENST00000533526 TNFRSF6BO95407 300 aa3.07□□□□□ -1.92
ATM-220ENST00000533526 RFPL3SP0C7P2 107 aa3.07□□□□□ -1.92
ATM-220ENST00000533526 PDIA3P30101 505 aaKnown RBP3.07□□□□□ -1.92
ATM-220ENST00000533526 PCP4P48539 62 aa3.07□□□□□ -1.92
ATM-220ENST00000533526 SLC37A1P57057 533 aa3.07□□□□□ -1.92
ATM-220ENST00000533526 FOXL2P58012 376 aa3.07□□□□□ -1.92
ATM-220ENST00000533526 SF3A3Q12874 501 aaKnown RBP eCLIP3.07□□□□□ -1.92
ATM-220ENST00000533526 PDCD2Q16342 344 aaPredicted RBP3.07□□□□□ -1.92
ATM-220ENST00000533526 GPR162Q16538 588 aa3.07□□□□□ -1.92
ATM-220ENST00000533526 CCDC38Q502W7 563 aa3.07□□□□□ -1.92
ATM-220ENST00000533526 ISM2Q6H9L7 571 aa3.07□□□□□ -1.92
ATM-220ENST00000533526 NFRKBQ6P4R8 1299 aa3.07□□□□□ -1.92
ATM-220ENST00000533526 ZNF474Q6S9Z5 364 aaPredicted RBP3.07□□□□□ -1.92
ATM-220ENST00000533526 RAB11FIP2Q7L804 512 aa3.07□□□□□ -1.92
ATM-220ENST00000533526 PIM3Q86V86 326 aa3.07□□□□□ -1.92
ATM-220ENST00000533526 SLC44A2Q8IWA5 706 aaPredicted RBP3.07□□□□□ -1.92
ATM-220ENST00000533526 PAQR4Q8N4S7 273 aaPredicted RBP3.07□□□□□ -1.92
ATM-220ENST00000533526 ARFGAP1Q8N6T3 406 aa3.07□□□□□ -1.92
ATM-220ENST00000533526 ARL14EPQ8N8R7 260 aaPredicted RBP3.07□□□□□ -1.92
ATM-220ENST00000533526 ATG16L2Q8NAA4 619 aa3.07□□□□□ -1.92
ATM-220ENST00000533526 SLC44A5Q8NCS7 719 aa3.07□□□□□ -1.92
ATM-220ENST00000533526 OR52N4Q8NGI2 321 aa3.07□□□□□ -1.92
ATM-220ENST00000533526 POF1BQ8WVV4 589 aa3.07□□□□□ -1.92
ATM-220ENST00000533526 ZFPM2Q8WW38 1151 aa3.07□□□□□ -1.92
ATM-220ENST00000533526 CPT1BQ92523 772 aa3.07□□□□□ -1.92
ATM-220ENST00000533526 MCRS1Q96EZ8 462 aa3.07□□□□□ -1.92
ATM-220ENST00000533526 CLMNQ96JQ2 1002 aa3.07□□□□□ -1.92
ATM-220ENST00000533526 RMDN3Q96TC7 470 aa3.07□□□□□ -1.92
ATM-220ENST00000533526 NPAS1Q99742 590 aa3.07□□□□□ -1.92
ATM-220ENST00000533526 TMEM120AQ9BXJ8 343 aa3.07□□□□□ -1.92
ATM-220ENST00000533526 SPRTNQ9H040 489 aaPredicted RBP3.07□□□□□ -1.92
ATM-220ENST00000533526 MOV10Q9HCE1 1003 aaKnown RBP3.07□□□□□ -1.92
ATM-220ENST00000533526 MLXIPLQ9NP71 852 aa3.07□□□□□ -1.92
ATM-220ENST00000533526 POT1Q9NUX5 634 aa3.07□□□□□ -1.92
ATM-220ENST00000533526 TMLHEQ9NVH6 421 aa3.07□□□□□ -1.92
ATM-220ENST00000533526 DACT1Q9NYF0 836 aa3.07□□□□□ -1.92
ATM-220ENST00000533526 TAGLN3Q9UI15 199 aa3.07□□□□□ -1.92
ATM-220ENST00000533526 AGO2Q9UKV8 859 aaKnown RBP3.07□□□□□ -1.92
ATM-220ENST00000533526 BAG5Q9UL15 447 aa3.07□□□□□ -1.92
ATM-220ENST00000533526 RAB21Q9UL25 225 aa3.07□□□□□ -1.92
ATM-220ENST00000533526 TRPC5Q9UL62 973 aaPredicted RBP3.07□□□□□ -1.92
ATM-220ENST00000533526 AFG3L2Q9Y4W6 797 aa3.07□□□□□ -1.92
ATM-220ENST00000533526 COMMD10Q9Y6G5 202 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms