RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 MAGEA12P43365 314 aa17.08■□□□□ 0.33
CTSB-228ENST00000533455 PHKA2P46019 1235 aa17.08■□□□□ 0.33
CTSB-228ENST00000533455 SNX16P57768 344 aa17.08■□□□□ 0.33
CTSB-228ENST00000533455 LPCAT4Q643R3 524 aa17.08■□□□□ 0.33
CTSB-228ENST00000533455 RSPH3Q86UC2 560 aa17.08■□□□□ 0.33
CTSB-228ENST00000533455 IFNLR1Q8IU57 520 aaPredicted RBP17.08■□□□□ 0.33
CTSB-228ENST00000533455 C12orf29Q8N999 325 aa17.08■□□□□ 0.33
CTSB-228ENST00000533455 PIP4K2CQ8TBX8 421 aa17.08■□□□□ 0.33
CTSB-228ENST00000533455 SLC35F5Q8WV83 523 aa17.08■□□□□ 0.33
CTSB-228ENST00000533455 TFB1MQ8WVM0 346 aaKnown RBP17.08■□□□□ 0.33
CTSB-228ENST00000533455 ISL2Q96A47 359 aa17.08■□□□□ 0.33
CTSB-228ENST00000533455 CLMNQ96JQ2 1002 aa17.08■□□□□ 0.33
CTSB-228ENST00000533455 BTBD9Q96Q07 612 aa17.08■□□□□ 0.33
CTSB-228ENST00000533455 VCX3AQ9NNX9 186 aa17.08■□□□□ 0.33
CTSB-228ENST00000533455 DTLQ9NZJ0 730 aa17.08■□□□□ 0.33
CTSB-228ENST00000533455 FZD1Q9UP38 647 aa17.08■□□□□ 0.33
CTSB-228ENST00000533455 AP4E1Q9UPM8 1137 aa17.08■□□□□ 0.33
CTSB-228ENST00000533455 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.08■□□□□ 0.32
CTSB-228ENST00000533455 NOP56O00567 594 aaKnown RBP17.08■□□□□ 0.32
CTSB-228ENST00000533455 AP1G1O43747 822 aa17.08■□□□□ 0.32
CTSB-228ENST00000533455 HBP1O60381 514 aa17.08■□□□□ 0.32
CTSB-228ENST00000533455 GABBR2O75899 941 aa17.08■□□□□ 0.32
CTSB-228ENST00000533455 RALBP11234 206 aa17.08■□□□□ 0.32
CTSB-228ENST00000533455 TFE3P19532 575 aaPredicted RBP17.08■□□□□ 0.32
CTSB-228ENST00000533455 MX2P20592 715 aa17.08■□□□□ 0.32
CTSB-228ENST00000533455 ACAT1P24752 427 aaKnown RBP17.08■□□□□ 0.32
CTSB-228ENST00000533455 PEX2P28328 305 aa17.08■□□□□ 0.32
CTSB-228ENST00000533455 AQP4P55087 323 aa17.08■□□□□ 0.32
CTSB-228ENST00000533455 CFAP157Q5JU67 520 aa17.08■□□□□ 0.32
CTSB-228ENST00000533455 CASC4Q6P4E1 433 aa17.08■□□□□ 0.32
CTSB-228ENST00000533455 NT5DC4Q86YG4 428 aa17.08■□□□□ 0.32
CTSB-228ENST00000533455 FBXW8Q8N3Y1 598 aa17.08■□□□□ 0.32
CTSB-228ENST00000533455 KLRG1Q96E93 195 aa17.08■□□□□ 0.32
CTSB-228ENST00000533455 DPP3Q9NY33 737 aa17.08■□□□□ 0.32
CTSB-228ENST00000533455 TMEM216Q9P0N5 145 aa17.08■□□□□ 0.32
CTSB-228ENST00000533455 PCDHB12Q9Y5F1 795 aa17.08■□□□□ 0.32
CTSB-228ENST00000533455 PSAT1Q9Y617 370 aa17.08■□□□□ 0.32
CTSB-228ENST00000533455 USP3Q9Y6I4 520 aa17.08■□□□□ 0.32
CTSB-228ENST00000533455 COMMD3-BMI1R4GMX3 469 aa17.08■□□□□ 0.32
CTSB-228ENST00000533455 RALGAPA2Q2PPJ7 1873 aa17.07■□□□□ 0.32
CTSB-228ENST00000533455 H3BNX3 289 aa17.07■□□□□ 0.32
CTSB-228ENST00000533455 MGAT1P26572 445 aa17.07■□□□□ 0.32
CTSB-228ENST00000533455 SCNN1AP37088 669 aa17.07■□□□□ 0.32
CTSB-228ENST00000533455 GARSP41250 739 aaKnown RBP17.07■□□□□ 0.32
CTSB-228ENST00000533455 GMPSP49915 693 aaPredicted RBP17.07■□□□□ 0.32
CTSB-228ENST00000533455 RPS6KA3P51812 740 aa17.07■□□□□ 0.32
CTSB-228ENST00000533455 MTTPP55157 894 aa17.07■□□□□ 0.32
CTSB-228ENST00000533455 CCDC153Q494R4 210 aa17.07■□□□□ 0.32
CTSB-228ENST00000533455 FSCBQ5H9T9 825 aa17.07■□□□□ 0.32
CTSB-228ENST00000533455 EEPD1Q7L9B9 569 aa17.07■□□□□ 0.32
CTSB-228ENST00000533455 SCUBE3Q8IX30 993 aa17.07■□□□□ 0.32
CTSB-228ENST00000533455 DEFB107AQ8IZN7 70 aa17.07■□□□□ 0.32
CTSB-228ENST00000533455 NME8Q8N427 588 aa17.07■□□□□ 0.32
CTSB-228ENST00000533455 PRDM16Q9HAZ2 1276 aa17.07■□□□□ 0.32
CTSB-228ENST00000533455 ADAM28Q9UKQ2 775 aa17.07■□□□□ 0.32
CTSB-228ENST00000533455 SORBS2O94875 1100 aaKnown RBP17.06■□□□□ 0.32
CTSB-228ENST00000533455 COX4I1P13073 169 aa17.06■□□□□ 0.32
CTSB-228ENST00000533455 RAG1P15918 1043 aa17.06■□□□□ 0.32
CTSB-228ENST00000533455 VCLP18206 1134 aa17.06■□□□□ 0.32
CTSB-228ENST00000533455 GP5P40197 560 aa17.06■□□□□ 0.32
CTSB-228ENST00000533455 SH3BGRP55822 239 aaPredicted RBP17.06■□□□□ 0.32
CTSB-228ENST00000533455 CRADDP78560 199 aa17.06■□□□□ 0.32
CTSB-228ENST00000533455 TBL3Q12788 808 aaKnown RBP17.06■□□□□ 0.32
CTSB-228ENST00000533455 EPGNQ6UW88 154 aa17.06■□□□□ 0.32
CTSB-228ENST00000533455 FRMD7Q6ZUT3 714 aa17.06■□□□□ 0.32
CTSB-228ENST00000533455 SLC26A9Q7LBE3 791 aa17.06■□□□□ 0.32
CTSB-228ENST00000533455 KBTBD6Q86V97 674 aa17.06■□□□□ 0.32
CTSB-228ENST00000533455 COLGALT1Q8NBJ5 622 aa17.06■□□□□ 0.32
CTSB-228ENST00000533455 KCNK16Q96T55 309 aa17.06■□□□□ 0.32
CTSB-228ENST00000533455 RTKNQ9BST9 563 aa17.06■□□□□ 0.32
CTSB-228ENST00000533455 EPB41L1Q9H4G0 881 aa17.06■□□□□ 0.32
CTSB-228ENST00000533455 SMARCAD1Q9H4L7 1026 aa17.06■□□□□ 0.32
CTSB-228ENST00000533455 ARHGAP26Q9UNA1 814 aa17.06■□□□□ 0.32
CTSB-228ENST00000533455 CDY2AQ9Y6F7 541 aa17.06■□□□□ 0.32
CTSB-228ENST00000533455 CDY1Q9Y6F8 540 aa17.06■□□□□ 0.32
CTSB-228ENST00000533455 MYO18AQ92614 2054 aaKnown RBP17.06■□□□□ 0.32
CTSB-228ENST00000533455 SOCS7O14512 581 aa17.06■□□□□ 0.32
CTSB-228ENST00000533455 PEX10O60683 326 aa17.06■□□□□ 0.32
CTSB-228ENST00000533455 OPHN1O60890 802 aa17.06■□□□□ 0.32
CTSB-228ENST00000533455 C22orf31O95567 290 aa17.06■□□□□ 0.32
CTSB-228ENST00000533455 CPA3P15088 417 aa17.06■□□□□ 0.32
CTSB-228ENST00000533455 BAG6P46379 1132 aa17.06■□□□□ 0.32
CTSB-228ENST00000533455 NUMBP49757 651 aa17.06■□□□□ 0.32
CTSB-228ENST00000533455 ANKRD20A4Q4UJ75 823 aa17.06■□□□□ 0.32
CTSB-228ENST00000533455 GRTP1Q5TC63 336 aa17.06■□□□□ 0.32
CTSB-228ENST00000533455 OGFRL1Q5TC84 451 aaPredicted RBP17.06■□□□□ 0.32
CTSB-228ENST00000533455 PHTF2Q8N3S3 785 aa17.06■□□□□ 0.32
CTSB-228ENST00000533455 DTNBP1Q96EV8 351 aa17.06■□□□□ 0.32
CTSB-228ENST00000533455 CPNE1Q99829 537 aa17.06■□□□□ 0.32
CTSB-228ENST00000533455 CDH19Q9H159 772 aa17.06■□□□□ 0.32
CTSB-228ENST00000533455 CYP4F11Q9HBI6 524 aa17.06■□□□□ 0.32
CTSB-228ENST00000533455 RCOR3Q9P2K3 495 aaPredicted RBP17.06■□□□□ 0.32
CTSB-228ENST00000533455 SCN1AP35498 2009 aa17.05■□□□□ 0.32
CTSB-228ENST00000533455 UTRNP46939 3433 aa17.05■□□□□ 0.32
CTSB-228ENST00000533455 GRIA2P42262 883 aa17.05■□□□□ 0.32
CTSB-228ENST00000533455 DLG1Q12959 904 aa17.05■□□□□ 0.32
CTSB-228ENST00000533455 KLF10Q13118 480 aa17.05■□□□□ 0.32
CTSB-228ENST00000533455 ITGA9Q13797 1035 aa17.05■□□□□ 0.32
CTSB-228ENST00000533455 TRIP10Q15642 601 aa17.05■□□□□ 0.32
CTSB-228ENST00000533455 PDCD2Q16342 344 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms