RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 TMEM215Q68D42 235 aa21.17■□□□□ 0.98
CCS-208ENST00000533244 PHLDB2Q86SQ0 1253 aa21.17■□□□□ 0.98
CCS-208ENST00000533244 MCOLN2Q8IZK6 566 aa21.17■□□□□ 0.98
CCS-208ENST00000533244 ZNF557Q8N988 423 aaPredicted RBP21.17■□□□□ 0.98
CCS-208ENST00000533244 NKD2Q969F2 451 aaPredicted RBP21.17■□□□□ 0.98
CCS-208ENST00000533244 RNF34Q969K3 372 aa21.17■□□□□ 0.98
CCS-208ENST00000533244 EPC1Q9H2F5 836 aa21.17■□□□□ 0.98
CCS-208ENST00000533244 ANLNQ9NQW6 1124 aa21.17■□□□□ 0.98
CCS-208ENST00000533244 PRR23AA6NEV1 266 aa21.16■□□□□ 0.98
CCS-208ENST00000533244 DDX3XO00571 662 aaKnown RBP eCLIP21.16■□□□□ 0.982e-13■■■■□ 25.1
CCS-208ENST00000533244 GJB6O95452 261 aa21.16■□□□□ 0.98
CCS-208ENST00000533244 ADCY5O95622 1261 aa21.16■□□□□ 0.98
CCS-208ENST00000533244 NTSR1P30989 418 aa21.16■□□□□ 0.98
CCS-208ENST00000533244 PTPN9P43378 593 aa21.16■□□□□ 0.98
CCS-208ENST00000533244 DGKEP52429 567 aa21.16■□□□□ 0.98
CCS-208ENST00000533244 ENPP2Q13822 863 aa21.16■□□□□ 0.98
CCS-208ENST00000533244 PPP1R15BQ5SWA1 713 aa21.16■□□□□ 0.98
CCS-208ENST00000533244 RASSF3Q86WH2 238 aa21.16■□□□□ 0.98
CCS-208ENST00000533244 LGI2Q8N0V4 545 aa21.16■□□□□ 0.98
CCS-208ENST00000533244 FIBINQ8TAL6 211 aa21.16■□□□□ 0.98
CCS-208ENST00000533244 WFIKKN2Q8TEU8 576 aa21.16■□□□□ 0.98
CCS-208ENST00000533244 RXFP2Q8WXD0 754 aa21.16■□□□□ 0.98
CCS-208ENST00000533244 VCPIP1Q96JH7 1222 aa21.16■□□□□ 0.98
CCS-208ENST00000533244 ACOX2Q99424 681 aa21.16■□□□□ 0.98
CCS-208ENST00000533244 GABRG3Q99928 467 aa21.16■□□□□ 0.98
CCS-208ENST00000533244 CD248Q9HCU0 757 aa21.16■□□□□ 0.98
CCS-208ENST00000533244 ELOVL2Q9NXB9 296 aa21.16■□□□□ 0.98
CCS-208ENST00000533244 HS3ST4Q9Y661 456 aa21.16■□□□□ 0.98
CCS-208ENST00000533244 EML5Q05BV3 1969 aa21.15■□□□□ 0.98
CCS-208ENST00000533244 TYW5A2RUC4 315 aaKnown RBP21.15■□□□□ 0.98
CCS-208ENST00000533244 SIGLEC16A6NMB1 481 aa21.15■□□□□ 0.98
CCS-208ENST00000533244 F5H5T6 163 aa21.15■□□□□ 0.98
CCS-208ENST00000533244 NPC1O15118 1278 aa21.15■□□□□ 0.98
CCS-208ENST00000533244 PAGE1O75459 146 aa21.15■□□□□ 0.98
CCS-208ENST00000533244 KRT3P12035 628 aa21.15■□□□□ 0.98
CCS-208ENST00000533244 GZMAP12544 262 aa21.15■□□□□ 0.98
CCS-208ENST00000533244 SKILP12757 684 aa21.15■□□□□ 0.98
CCS-208ENST00000533244 HOXD11P31277 338 aaPredicted RBP21.15■□□□□ 0.98
CCS-208ENST00000533244 CNR2P34972 360 aa21.15■□□□□ 0.98
CCS-208ENST00000533244 RDXP35241 583 aaKnown RBP21.15■□□□□ 0.98
CCS-208ENST00000533244 PXNP49023 591 aaPredicted RBP21.15■□□□□ 0.98
CCS-208ENST00000533244 MRE11P49959 708 aa21.15■□□□□ 0.98
CCS-208ENST00000533244 ATXN1P54253 815 aaKnown RBP21.15■□□□□ 0.98
CCS-208ENST00000533244 CCDC14Q49A88 953 aa21.15■□□□□ 0.98
CCS-208ENST00000533244 C5orf22Q49AR2 442 aa21.15■□□□□ 0.98
CCS-208ENST00000533244 HEATR6Q6AI08 1181 aaKnown RBP21.15■□□□□ 0.98
CCS-208ENST00000533244 ASCL5Q7RTU5 278 aa21.15■□□□□ 0.98
CCS-208ENST00000533244 MFN1Q8IWA4 741 aa21.15■□□□□ 0.98
CCS-208ENST00000533244 CFAP52Q8N1V2 620 aa21.15■□□□□ 0.98
CCS-208ENST00000533244 SUMF1Q8NBK3 374 aa21.15■□□□□ 0.98
CCS-208ENST00000533244 TSTD1Q8NFU3 115 aa21.15■□□□□ 0.98
CCS-208ENST00000533244 TKTL2Q9H0I9 626 aa21.15■□□□□ 0.98
CCS-208ENST00000533244 WDCPQ9H6R7 721 aa21.15■□□□□ 0.98
CCS-208ENST00000533244 ABCB8Q9NUT2 735 aa21.15■□□□□ 0.98
CCS-208ENST00000533244 STIM2Q9P246 746 aa21.15■□□□□ 0.98
CCS-208ENST00000533244 THAP10Q9P2Z0 257 aaPredicted RBP21.15■□□□□ 0.98
CCS-208ENST00000533244 GGA2Q9UJY4 613 aa21.15■□□□□ 0.98
CCS-208ENST00000533244 LUC7L2Q9Y383 392 aaKnown RBP21.15■□□□□ 0.98
CCS-208ENST00000533244 PAXBP1Q9Y5B6 917 aa21.15■□□□□ 0.98
CCS-208ENST00000533244 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.15■□□□□ 0.985e-7■■□□□ 13.9
CCS-208ENST00000533244 MUC22E2RYF6 1773 aaPredicted RBP21.15■□□□□ 0.98
CCS-208ENST00000533244 GPR179Q6PRD1 2367 aa21.14■□□□□ 0.98
CCS-208ENST00000533244 TIMM44O43615 452 aa21.14■□□□□ 0.98
CCS-208ENST00000533244 LUC7L3O95232 432 aaKnown RBP21.14■□□□□ 0.98
CCS-208ENST00000533244 PABPC1P11940 636 aaKnown RBP21.14■□□□□ 0.98
CCS-208ENST00000533244 PDGFRAP16234 1089 aa21.14■□□□□ 0.98
CCS-208ENST00000533244 SDC4P31431 198 aa21.14■□□□□ 0.98
CCS-208ENST00000533244 RFC1P35251 1148 aaPredicted RBP21.14■□□□□ 0.98
CCS-208ENST00000533244 AUHQ13825 339 aaKnown RBP21.14■□□□□ 0.98
CCS-208ENST00000533244 TTC39BQ5VTQ0 682 aaPredicted RBP21.14■□□□□ 0.98
CCS-208ENST00000533244 FBXL22Q6P050 247 aa21.14■□□□□ 0.98
CCS-208ENST00000533244 SND1Q7KZF4 910 aaKnown RBP eCLIP21.14■□□□□ 0.98
CCS-208ENST00000533244 ADIPOR2Q86V24 386 aa21.14■□□□□ 0.98
CCS-208ENST00000533244 CHPFQ8IZ52 775 aa21.14■□□□□ 0.98
CCS-208ENST00000533244 CPLX3Q8WVH0 158 aa21.14■□□□□ 0.98
CCS-208ENST00000533244 CENPIQ92674 756 aaPredicted RBP21.14■□□□□ 0.98
CCS-208ENST00000533244 SELENOOQ9BVL4 669 aa21.14■□□□□ 0.98
CCS-208ENST00000533244 BZW2Q9Y6E2 419 aaKnown RBP21.14■□□□□ 0.98
CCS-208ENST00000533244 A0A1W2PQF6 199 aa21.13■□□□□ 0.97
CCS-208ENST00000533244 AXIN1O15169 862 aa21.13■□□□□ 0.97
CCS-208ENST00000533244 HRO43593 1189 aa21.13■□□□□ 0.97
CCS-208ENST00000533244 LMNAP02545 664 aaKnown RBP21.13■□□□□ 0.97
CCS-208ENST00000533244 RRM1P23921 792 aa21.13■□□□□ 0.97
CCS-208ENST00000533244 CASP14P31944 242 aa21.13■□□□□ 0.97
CCS-208ENST00000533244 CD70P32970 193 aa21.13■□□□□ 0.97
CCS-208ENST00000533244 C15orf59Q2T9L4 293 aaPredicted RBP21.13■□□□□ 0.97
CCS-208ENST00000533244 SPECC1LQ69YQ0 1117 aa21.13■□□□□ 0.97
CCS-208ENST00000533244 DNAJC24Q6P3W2 148 aa21.13■□□□□ 0.97
CCS-208ENST00000533244 WDR59Q6PJI9 974 aa21.13■□□□□ 0.97
CCS-208ENST00000533244 STRADAQ7RTN6 431 aa21.13■□□□□ 0.97
CCS-208ENST00000533244 ZNF683Q8IZ20 524 aa21.13■□□□□ 0.97
CCS-208ENST00000533244 AHI1Q8N157 1196 aa21.13■□□□□ 0.97
CCS-208ENST00000533244 UCMAQ8WVF2 138 aa21.13■□□□□ 0.97
CCS-208ENST00000533244 CACNA2D2Q9NY47 1150 aa21.13■□□□□ 0.97
CCS-208ENST00000533244 OTOGLQ3ZCN5 2332 aa21.13■□□□□ 0.97
CCS-208ENST00000533244 SERPING1P05155 500 aa21.12■□□□□ 0.97
CCS-208ENST00000533244 HOXB2P14652 356 aa21.12■□□□□ 0.97
CCS-208ENST00000533244 HNRNPH3P31942 346 aaKnown RBP21.12■□□□□ 0.97
CCS-208ENST00000533244 ATP11AP98196 1134 aa21.12■□□□□ 0.97
CCS-208ENST00000533244 LMAN2Q12907 356 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms