RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 HNF1BP35680 557 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 GPD2P43304 727 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 RAP1GAPP47736 663 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 LSSP48449 732 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 CDK7P50613 346 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 ARHGDIBP52566 201 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 STX17P56962 302 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 EIF4A1P60842 406 aaKnown RBP5.71□□□□□ -1.5
CD44-236ENST00000533222 RPS3AP61247 264 aaKnown RBP5.71□□□□□ -1.5
CD44-236ENST00000533222 UBE2IP63279 158 aaKnown RBP5.71□□□□□ -1.5
CD44-236ENST00000533222 TMPRSS15P98073 1019 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 ECT2LQ008S8 904 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 OCA2Q04671 838 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 ZBTB16Q05516 673 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 RAD51Q06609 339 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 MORC3Q14149 939 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 STAT4Q14765 748 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 PTPAQ15257 358 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 TOMM20Q15388 145 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 WASHC2DQ5SRD0 308 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 C6orf10Q5SRN2 563 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 DACT2Q5SW24 774 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 C10orf62Q5T681 223 aaPredicted RBP5.71□□□□□ -1.5
CD44-236ENST00000533222 AADACL4Q5VUY2 407 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 TCERG1LQ5VWI1 586 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 NIPAL1Q6NVV3 410 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 MZT2BQ6NZ67 158 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 EMBQ6PCB8 327 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 B3GNT6Q6ZMB0 384 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 FRA10AC1Q70Z53 315 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 BTN2A1Q7KYR7 527 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 TRPM8Q7Z2W7 1104 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 RTN4RL1Q86UN2 441 aaPredicted RBP5.71□□□□□ -1.5
CD44-236ENST00000533222 HEATR4Q86WZ0 1026 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 OR8H2Q8N162 312 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 MREGQ8N565 214 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 LINC00482Q8N8I6 264 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 OR6S1Q8NH40 331 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 FBXO30Q8TB52 745 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 SLC22A8Q8TCC7 542 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 GAB3Q8WWW8 586 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 NELFBQ8WX92 580 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 SLC9A6Q92581 669 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 FOXRED1Q96CU9 486 aaPredicted RBP5.71□□□□□ -1.5
CD44-236ENST00000533222 C7orf34Q96L11 122 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 BIRC8Q96P09 236 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 USP28Q96RU2 1077 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 C9orf16Q9BUW7 83 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 NUSAP1Q9BXS6 441 aaKnown RBP5.71□□□□□ -1.5
CD44-236ENST00000533222 GON7Q9BXV9 100 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 FTOQ9C0B1 505 aaKnown RBP eCLIP5.71□□□□□ -1.5
CD44-236ENST00000533222 GLT8D2Q9H1C3 349 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 WNT5BQ9H1J7 359 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 ADNPQ9H2P0 1102 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 KCNN2Q9H2S1 579 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 ELAC1Q9H777 363 aaKnown RBP5.71□□□□□ -1.5
CD44-236ENST00000533222 ZMAT4Q9H898 229 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 PLGRKTQ9HBL7 147 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 CD209Q9NNX6 404 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 HAUS2Q9NVX0 235 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 PAQR5Q9NXK6 330 aaPredicted RBP5.71□□□□□ -1.5
CD44-236ENST00000533222 PLK2Q9NYY3 685 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 EHD3Q9NZN3 535 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 ARHGAP28Q9P2N2 729 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 CHTOPQ9Y3Y2 248 aaKnown RBP5.71□□□□□ -1.5
CD44-236ENST00000533222 GCC2Q8IWJ2 1684 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 ACEP12821 1306 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 FANCAO15360 1455 aa5.71□□□□□ -1.5
CD44-236ENST00000533222 PRAMEF22A3QJZ6 481 aa5.7□□□□□ -1.5
CD44-236ENST00000533222 SH3D21A4FU49 640 aa5.7□□□□□ -1.5
CD44-236ENST00000533222 GMNCA6NCL1 334 aa5.7□□□□□ -1.5
CD44-236ENST00000533222 OR5K3A6NET4 321 aa5.7□□□□□ -1.5
CD44-236ENST00000533222 CCT8L1PA6NM43 557 aa5.7□□□□□ -1.5
CD44-236ENST00000533222 MAPK13O15264 365 aa5.7□□□□□ -1.5
CD44-236ENST00000533222 HDAC3O15379 428 aa5.7□□□□□ -1.5
CD44-236ENST00000533222 SCO2O43819 266 aa5.7□□□□□ -1.5
CD44-236ENST00000533222 N4BP1O75113 896 aaKnown RBP5.7□□□□□ -1.5
CD44-236ENST00000533222 TOM1L1O75674 476 aa5.7□□□□□ -1.5
CD44-236ENST00000533222 SNX4O95219 450 aa5.7□□□□□ -1.5
CD44-236ENST00000533222 KRT75O95678 551 aa5.7□□□□□ -1.5
CD44-236ENST00000533222 ASS1P00966 412 aaKnown RBP5.7□□□□□ -1.5
CD44-236ENST00000533222 IFNA14P01570 189 aa5.7□□□□□ -1.5
CD44-236ENST00000533222 DDX5P17844 614 aaKnown RBP5.7□□□□□ -1.5
CD44-236ENST00000533222 ARF4P18085 180 aaPredicted RBP5.7□□□□□ -1.5
CD44-236ENST00000533222 JAK1P23458 1154 aa5.7□□□□□ -1.5
CD44-236ENST00000533222 PSMA2P25787 234 aa5.7□□□□□ -1.5
CD44-236ENST00000533222 SERPINB3P29508 390 aa5.7□□□□□ -1.5
CD44-236ENST00000533222 ADSLP30566 484 aaPredicted RBP5.7□□□□□ -1.5
CD44-236ENST00000533222 KRT20P35900 424 aa5.7□□□□□ -1.5
CD44-236ENST00000533222 ADCY8P40145 1251 aa5.7□□□□□ -1.5
CD44-236ENST00000533222 SLC26A3P40879 764 aa5.7□□□□□ -1.5
CD44-236ENST00000533222 MDH1P40925 334 aaKnown RBP5.7□□□□□ -1.5
CD44-236ENST00000533222 TXKP42681 527 aa5.7□□□□□ -1.5
CD44-236ENST00000533222 PCYT1AP49585 367 aa5.7□□□□□ -1.5
CD44-236ENST00000533222 C21orf58P58505 322 aa5.7□□□□□ -1.5
CD44-236ENST00000533222 HERVK_113P62684 666 aa5.7□□□□□ -1.5
CD44-236ENST00000533222 MTX1Q13505 466 aa5.7□□□□□ -1.5
CD44-236ENST00000533222 FRG1Q14331 258 aaKnown RBP5.7□□□□□ -1.5
CD44-236ENST00000533222 PUM3Q15397 648 aaKnown RBP5.7□□□□□ -1.5
CD44-236ENST00000533222 ZNF174Q15697 407 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms