RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 OMDQ99983 421 aa12.04□□□□□ -0.48
CMTM1-216ENST00000533078 DDX50Q9BQ39 737 aaKnown RBP12.04□□□□□ -0.48
CMTM1-216ENST00000533078 IRX2Q9BZI1 471 aaPredicted RBP12.04□□□□□ -0.48
CMTM1-216ENST00000533078 APOBEC3GQ9HC16 384 aaKnown RBP12.04□□□□□ -0.48
CMTM1-216ENST00000533078 TMEM8AQ9HCN3 771 aa12.04□□□□□ -0.48
CMTM1-216ENST00000533078 PRSS16Q9NQE7 514 aa12.04□□□□□ -0.48
CMTM1-216ENST00000533078 CISHQ9NSE2 258 aa12.04□□□□□ -0.48
CMTM1-216ENST00000533078 FBXL12Q9NXK8 326 aa12.04□□□□□ -0.48
CMTM1-216ENST00000533078 USP25Q9UHP3 1055 aa12.04□□□□□ -0.48
CMTM1-216ENST00000533078 CFAP45Q9UL16 551 aa12.04□□□□□ -0.48
CMTM1-216ENST00000533078 TPX2Q9ULW0 747 aaKnown RBP12.04□□□□□ -0.48
CMTM1-216ENST00000533078 SHROOM3Q8TF72 1996 aa12.04□□□□□ -0.48
CMTM1-216ENST00000533078 A0A1W2PPC4 97 aa12.03□□□□□ -0.48
CMTM1-216ENST00000533078 CAPN8A6NHC0 703 aa12.03□□□□□ -0.48
CMTM1-216ENST00000533078 K7ELQ4 463 aaPredicted RBP12.03□□□□□ -0.48
CMTM1-216ENST00000533078 IRAK2O43187 625 aa12.03□□□□□ -0.48
CMTM1-216ENST00000533078 MOCS3O95396 460 aa12.03□□□□□ -0.48
CMTM1-216ENST00000533078 ASLP04424 464 aa12.03□□□□□ -0.48
CMTM1-216ENST00000533078 MXI1P50539 228 aa12.03□□□□□ -0.48
CMTM1-216ENST00000533078 YWHAEP62258 255 aaKnown RBP12.03□□□□□ -0.48
CMTM1-216ENST00000533078 FOXD4L6Q3SYB3 417 aaPredicted RBP12.03□□□□□ -0.48
CMTM1-216ENST00000533078 MPP7Q5T2T1 576 aa12.03□□□□□ -0.48
CMTM1-216ENST00000533078 FOXD4L5Q5VV16 416 aaPredicted RBP12.03□□□□□ -0.48
CMTM1-216ENST00000533078 NUGGCQ68CJ6 796 aa12.03□□□□□ -0.48
CMTM1-216ENST00000533078 ARHGAP17Q68EM7 881 aa12.03□□□□□ -0.48
CMTM1-216ENST00000533078 ATL3Q6DD88 541 aa12.03□□□□□ -0.48
CMTM1-216ENST00000533078 FOXD4L3Q6VB84 417 aaPredicted RBP12.03□□□□□ -0.48
CMTM1-216ENST00000533078 MFN1Q8IWA4 741 aa12.03□□□□□ -0.48
CMTM1-216ENST00000533078 UNC45BQ8IWX7 931 aa12.03□□□□□ -0.48
CMTM1-216ENST00000533078 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.03□□□□□ -0.48
CMTM1-216ENST00000533078 RBBP8NLQ8NC74 664 aaPredicted RBP12.03□□□□□ -0.48
CMTM1-216ENST00000533078 FOXD4L4Q8WXT5 416 aaPredicted RBP12.03□□□□□ -0.48
CMTM1-216ENST00000533078 ULBP1Q9BZM6 244 aa12.03□□□□□ -0.48
CMTM1-216ENST00000533078 PABPC3Q9H361 631 aaKnown RBP12.03□□□□□ -0.48
CMTM1-216ENST00000533078 ABCC13Q9NSE7 274 aa12.03□□□□□ -0.48
CMTM1-216ENST00000533078 SERTAD1Q9UHV2 236 aa12.03□□□□□ -0.48
CMTM1-216ENST00000533078 PCDHA7Q9UN72 937 aa12.03□□□□□ -0.48
CMTM1-216ENST00000533078 TRAF3IP3Q9Y228 551 aa12.03□□□□□ -0.48
CMTM1-216ENST00000533078 CEP83Q9Y592 693 aa12.03□□□□□ -0.48
CMTM1-216ENST00000533078 XPO1O14980 1071 aaKnown RBP12.02□□□□□ -0.49
CMTM1-216ENST00000533078 KLRC4O43908 158 aa12.02□□□□□ -0.49
CMTM1-216ENST00000533078 RNASEH2AO75792 299 aaKnown RBP12.02□□□□□ -0.49
CMTM1-216ENST00000533078 HSP90AA1P07900 732 aaKnown RBP12.02□□□□□ -0.49
CMTM1-216ENST00000533078 CD38P28907 300 aa12.02□□□□□ -0.49
CMTM1-216ENST00000533078 ADIGQ0VDE8 80 aa12.02□□□□□ -0.49
CMTM1-216ENST00000533078 BST2Q10589 180 aaKnown RBP12.02□□□□□ -0.49
CMTM1-216ENST00000533078 NFIL3Q16649 462 aa12.02□□□□□ -0.49
CMTM1-216ENST00000533078 GOLGA7BQ2TAP0 167 aa12.02□□□□□ -0.49
CMTM1-216ENST00000533078 HS1BP3Q53T59 392 aa12.02□□□□□ -0.49
CMTM1-216ENST00000533078 SGO2Q562F6 1265 aa12.02□□□□□ -0.49
CMTM1-216ENST00000533078 RNF219Q5W0B1 726 aaPredicted RBP12.02□□□□□ -0.49
CMTM1-216ENST00000533078 BSPRYQ5W0U4 402 aa12.02□□□□□ -0.49
CMTM1-216ENST00000533078 PM20D1Q6GTS8 502 aa12.02□□□□□ -0.49
CMTM1-216ENST00000533078 ADIPOR2Q86V24 386 aa12.02□□□□□ -0.49
CMTM1-216ENST00000533078 GATAD2AQ86YP4 633 aa12.02□□□□□ -0.49
CMTM1-216ENST00000533078 SLC4A11Q8NBS3 891 aa12.02□□□□□ -0.49
CMTM1-216ENST00000533078 LSM14AQ8ND56 463 aaKnown RBP12.02□□□□□ -0.49
CMTM1-216ENST00000533078 FBXL13Q8NEE6 735 aa12.02□□□□□ -0.49
CMTM1-216ENST00000533078 OR2T34Q8NGX1 318 aa12.02□□□□□ -0.49
CMTM1-216ENST00000533078 ADAM32Q8TC27 787 aa12.02□□□□□ -0.49
CMTM1-216ENST00000533078 PAGE5Q96GU1 130 aa12.02□□□□□ -0.49
CMTM1-216ENST00000533078 SLC6A18Q96N87 628 aa12.02□□□□□ -0.49
CMTM1-216ENST00000533078 FCRL3Q96P31 734 aaPredicted RBP12.02□□□□□ -0.49
CMTM1-216ENST00000533078 RSPH9Q9H1X1 276 aaPredicted RBP12.02□□□□□ -0.49
CMTM1-216ENST00000533078 SFMBT1Q9UHJ3 866 aa12.02□□□□□ -0.49
CMTM1-216ENST00000533078 STOML2Q9UJZ1 356 aa12.02□□□□□ -0.49
CMTM1-216ENST00000533078 SLCO1B1Q9Y6L6 691 aa12.02□□□□□ -0.49
CMTM1-216ENST00000533078 ASH1LQ9NR48 2969 aaKnown RBP12.02□□□□□ -0.49
CMTM1-216ENST00000533078 COL5A1P20908 1838 aaPredicted RBP12.02□□□□□ -0.49
CMTM1-216ENST00000533078 ATXN7O15265 892 aaPredicted RBP12.01□□□□□ -0.49
CMTM1-216ENST00000533078 MAGEC1O60732 1142 aa12.01□□□□□ -0.49
CMTM1-216ENST00000533078 TBL1XO60907 577 aa12.01□□□□□ -0.49
CMTM1-216ENST00000533078 IGHV4-34P06331 123 aa12.01□□□□□ -0.49
CMTM1-216ENST00000533078 SETSIPP0DME0 302 aa12.01□□□□□ -0.49
CMTM1-216ENST00000533078 C7P10643 843 aa12.01□□□□□ -0.49
CMTM1-216ENST00000533078 EPB41P11171 864 aaKnown RBP12.01□□□□□ -0.49
CMTM1-216ENST00000533078 CD19P15391 556 aa12.01□□□□□ -0.49
CMTM1-216ENST00000533078 EIF2S3P41091 472 aaKnown RBP12.01□□□□□ -0.49
CMTM1-216ENST00000533078 RAD23BP54727 409 aa12.01□□□□□ -0.49
CMTM1-216ENST00000533078 PPP3CAQ08209 521 aa12.01□□□□□ -0.49
CMTM1-216ENST00000533078 ILKQ13418 452 aa12.01□□□□□ -0.49
CMTM1-216ENST00000533078 ADAM9Q13443 819 aa12.01□□□□□ -0.49
CMTM1-216ENST00000533078 CDH18Q13634 790 aa12.01□□□□□ -0.49
CMTM1-216ENST00000533078 CST6Q15828 149 aa12.01□□□□□ -0.49
CMTM1-216ENST00000533078 C1orf220Q5T0J3 134 aa12.01□□□□□ -0.49
CMTM1-216ENST00000533078 HES3Q5TGS1 186 aa12.01□□□□□ -0.49
CMTM1-216ENST00000533078 NCEH1Q6PIU2 408 aa12.01□□□□□ -0.49
CMTM1-216ENST00000533078 SND1Q7KZF4 910 aaKnown RBP eCLIP12.01□□□□□ -0.49
CMTM1-216ENST00000533078 ZNF605Q86T29 641 aa12.01□□□□□ -0.49
CMTM1-216ENST00000533078 EID2Q8N6I1 236 aa12.01□□□□□ -0.49
CMTM1-216ENST00000533078 HJURPQ8NCD3 748 aaPredicted RBP12.01□□□□□ -0.49
CMTM1-216ENST00000533078 EDEM1Q92611 657 aa12.01□□□□□ -0.49
CMTM1-216ENST00000533078 COL26A1Q96A83 441 aa12.01□□□□□ -0.49
CMTM1-216ENST00000533078 CRELD1Q96HD1 420 aa12.01□□□□□ -0.49
CMTM1-216ENST00000533078 CCDC34Q96HJ3 373 aa12.01□□□□□ -0.49
CMTM1-216ENST00000533078 NRSN2Q9GZP1 204 aa12.01□□□□□ -0.49
CMTM1-216ENST00000533078 CNGB3Q9NQW8 809 aa12.01□□□□□ -0.49
CMTM1-216ENST00000533078 RAB20Q9NX57 234 aa12.01□□□□□ -0.49
CMTM1-216ENST00000533078 STIM2Q9P246 746 aa12.01□□□□□ -0.49
CMTM1-216ENST00000533078 TSPAN16Q9UKR8 245 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms