RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 PSTPIP1O43586 416 aa12.96□□□□□ -0.33
COPB1-208ENST00000532088 PRPSAP2O60256 369 aa12.96□□□□□ -0.33
COPB1-208ENST00000532088 PALMO75781 387 aa12.96□□□□□ -0.33
COPB1-208ENST00000532088 KRT7P08729 469 aa12.96□□□□□ -0.33
COPB1-208ENST00000532088 CORO1AP31146 461 aaKnown RBP12.96□□□□□ -0.33
COPB1-208ENST00000532088 HTR7P34969 479 aa12.96□□□□□ -0.33
COPB1-208ENST00000532088 ADRA1BP35368 520 aa12.96□□□□□ -0.33
COPB1-208ENST00000532088 SLC25A11Q02978 314 aaKnown RBP12.96□□□□□ -0.33
COPB1-208ENST00000532088 FCHO2Q0JRZ9 810 aa12.96□□□□□ -0.33
COPB1-208ENST00000532088 ZC3H12AQ5D1E8 599 aaKnown RBP12.96□□□□□ -0.33
COPB1-208ENST00000532088 SH3PXD2AQ5TCZ1 1133 aa12.96□□□□□ -0.33
COPB1-208ENST00000532088 FAM131BQ86XD5 332 aa12.96□□□□□ -0.33
COPB1-208ENST00000532088 VSIG1Q86XK7 387 aa12.96□□□□□ -0.33
COPB1-208ENST00000532088 MFSD6LQ8IWD5 586 aa12.96□□□□□ -0.33
COPB1-208ENST00000532088 CPXM2Q8N436 756 aa12.96□□□□□ -0.33
COPB1-208ENST00000532088 RNF34Q969K3 372 aa12.96□□□□□ -0.33
COPB1-208ENST00000532088 CDK15Q96Q40 435 aa12.96□□□□□ -0.33
COPB1-208ENST00000532088 TKTL2Q9H0I9 626 aa12.96□□□□□ -0.33
COPB1-208ENST00000532088 OSBPL2Q9H1P3 480 aa12.96□□□□□ -0.33
COPB1-208ENST00000532088 RETREG1Q9H6L5 497 aa12.96□□□□□ -0.33
COPB1-208ENST00000532088 GKN1Q9NS71 199 aa12.96□□□□□ -0.33
COPB1-208ENST00000532088 THG1LQ9NWX6 298 aaKnown RBP12.96□□□□□ -0.33
COPB1-208ENST00000532088 SMPD4Q9NXE4 827 aa12.96□□□□□ -0.33
COPB1-208ENST00000532088 CFAP97Q9P2B7 532 aa12.96□□□□□ -0.33
COPB1-208ENST00000532088 IGSF9Q9P2J2 1179 aa12.96□□□□□ -0.33
COPB1-208ENST00000532088 CAPN6Q9Y6Q1 641 aa12.96□□□□□ -0.33
COPB1-208ENST00000532088 SPTBN5Q9NRC6 3674 aaKnown RBP12.96□□□□□ -0.34
COPB1-208ENST00000532088 CCDC66A2RUB6 948 aa12.95□□□□□ -0.34
COPB1-208ENST00000532088 HEPACAM2A8MVW5 462 aa12.95□□□□□ -0.34
COPB1-208ENST00000532088 MIF4GDA9UHW6 222 aaKnown RBP12.95□□□□□ -0.34
COPB1-208ENST00000532088 C2CD4DB7Z1M9 353 aa12.95□□□□□ -0.34
COPB1-208ENST00000532088 LOC730098B7Z3J9 87 aa12.95□□□□□ -0.34
COPB1-208ENST00000532088 SPOPO43791 374 aa12.95□□□□□ -0.34
COPB1-208ENST00000532088 KIF5CO60282 957 aa12.95□□□□□ -0.34
COPB1-208ENST00000532088 ACSL4O60488 711 aa12.95□□□□□ -0.34
COPB1-208ENST00000532088 MOCS3O95396 460 aa12.95□□□□□ -0.34
COPB1-208ENST00000532088 COMTP21964 271 aa12.95□□□□□ -0.34
COPB1-208ENST00000532088 CTNNA2P26232 953 aa12.95□□□□□ -0.34
COPB1-208ENST00000532088 SOX11P35716 441 aa12.95□□□□□ -0.34
COPB1-208ENST00000532088 CHKAP35790 457 aa12.95□□□□□ -0.34
COPB1-208ENST00000532088 KCNQ1P51787 676 aa12.95□□□□□ -0.34
COPB1-208ENST00000532088 ATXN1P54253 815 aaKnown RBP12.95□□□□□ -0.34
COPB1-208ENST00000532088 HTR4Q13639 388 aa12.95□□□□□ -0.34
COPB1-208ENST00000532088 EFHC2Q5JST6 749 aa12.95□□□□□ -0.34
COPB1-208ENST00000532088 ADGRF1Q5T601 910 aa12.95□□□□□ -0.34
COPB1-208ENST00000532088 ERMARDQ5T6L9 678 aa12.95□□□□□ -0.34
COPB1-208ENST00000532088 CYP4V2Q6ZWL3 525 aaPredicted RBP12.95□□□□□ -0.34
COPB1-208ENST00000532088 NT5DC3Q86UY8 548 aa12.95□□□□□ -0.34
COPB1-208ENST00000532088 ADHFE1Q8IWW8 467 aa12.95□□□□□ -0.34
COPB1-208ENST00000532088 RHOT1Q8IXI2 618 aa12.95□□□□□ -0.34
COPB1-208ENST00000532088 CD101Q93033 1021 aa12.95□□□□□ -0.34
COPB1-208ENST00000532088 TRMT1Q9NXH9 659 aaKnown RBP12.95□□□□□ -0.34
COPB1-208ENST00000532088 AMFRQ9UKV5 643 aa12.95□□□□□ -0.34
COPB1-208ENST00000532088 AGO1Q9UL18 857 aaKnown RBP12.95□□□□□ -0.34
COPB1-208ENST00000532088 FZD10Q9ULW2 581 aa12.95□□□□□ -0.34
COPB1-208ENST00000532088 CCL26Q9Y258 94 aa12.95□□□□□ -0.34
COPB1-208ENST00000532088 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.95□□□□□ -0.34
COPB1-208ENST00000532088 KIF26AQ9ULI4 1882 aaPredicted RBP12.95□□□□□ -0.34
COPB1-208ENST00000532088 SYNJ2BP-COX16A0A087WUM0 186 aa12.94□□□□□ -0.34
COPB1-208ENST00000532088 TMEM110-MUSTN1A8MSY1 372 aa12.94□□□□□ -0.34
COPB1-208ENST00000532088 ZNF487B1APH4 448 aa12.94□□□□□ -0.34
COPB1-208ENST00000532088 GFRA2O00451 464 aa12.94□□□□□ -0.34
COPB1-208ENST00000532088 KLKB1P03952 638 aa12.94□□□□□ -0.34
COPB1-208ENST00000532088 TUBB4AP04350 444 aa12.94□□□□□ -0.34
COPB1-208ENST00000532088 HMBSP08397 361 aa12.94□□□□□ -0.34
COPB1-208ENST00000532088 IL9P15248 144 aa12.94□□□□□ -0.34
COPB1-208ENST00000532088 PSMC3P17980 439 aa12.94□□□□□ -0.34
COPB1-208ENST00000532088 CTNNA1P35221 906 aaKnown RBP12.94□□□□□ -0.34
COPB1-208ENST00000532088 MLLT6P55198 1093 aaPredicted RBP12.94□□□□□ -0.34
COPB1-208ENST00000532088 TFF2Q03403 129 aa12.94□□□□□ -0.34
COPB1-208ENST00000532088 PDGFRLQ15198 375 aa12.94□□□□□ -0.34
COPB1-208ENST00000532088 DPYSL2Q16555 572 aa12.94□□□□□ -0.34
COPB1-208ENST00000532088 C5orf22Q49AR2 442 aa12.94□□□□□ -0.34
COPB1-208ENST00000532088 TANGO2Q6ICL3 276 aa12.94□□□□□ -0.34
COPB1-208ENST00000532088 SCYL2Q6P3W7 929 aa12.94□□□□□ -0.34
COPB1-208ENST00000532088 PARM1Q6UWI2 310 aa12.94□□□□□ -0.34
COPB1-208ENST00000532088 VITQ6UXI7 678 aa12.94□□□□□ -0.34
COPB1-208ENST00000532088 PEX26Q7Z412 305 aa12.94□□□□□ -0.34
COPB1-208ENST00000532088 CCDC185Q8N715 623 aa12.94□□□□□ -0.34
COPB1-208ENST00000532088 FAM71BQ8TC56 605 aa12.94□□□□□ -0.34
COPB1-208ENST00000532088 OSCP1Q8WVF1 389 aa12.94□□□□□ -0.34
COPB1-208ENST00000532088 ZNF592Q92610 1267 aa12.94□□□□□ -0.34
COPB1-208ENST00000532088 PEBP4Q96S96 227 aa12.94□□□□□ -0.34
COPB1-208ENST00000532088 SMG9Q9H0W8 520 aaKnown RBP12.94□□□□□ -0.34
COPB1-208ENST00000532088 PRDM6Q9NQX0 595 aa12.94□□□□□ -0.34
COPB1-208ENST00000532088 DDX56Q9NY93 547 aaKnown RBP12.94□□□□□ -0.34
COPB1-208ENST00000532088 COX16Q9P0S2 106 aa12.94□□□□□ -0.34
COPB1-208ENST00000532088 RCOR3Q9P2K3 495 aaPredicted RBP12.94□□□□□ -0.34
COPB1-208ENST00000532088 AP4E1Q9UPM8 1137 aa12.94□□□□□ -0.34
COPB1-208ENST00000532088 MAP4K5Q9Y4K4 846 aa12.94□□□□□ -0.34
COPB1-208ENST00000532088 REV3LO60673 3130 aa12.94□□□□□ -0.34
COPB1-208ENST00000532088 USP27XA6NNY8 438 aa12.93□□□□□ -0.34
COPB1-208ENST00000532088 POM121CA8CG34 1229 aa12.93□□□□□ -0.34
COPB1-208ENST00000532088 TNFRSF10AO00220 468 aa12.93□□□□□ -0.34
COPB1-208ENST00000532088 CHADO15335 359 aa12.93□□□□□ -0.34
COPB1-208ENST00000532088 PAGE1O75459 146 aa12.93□□□□□ -0.34
COPB1-208ENST00000532088 IRF1P10914 325 aa12.93□□□□□ -0.34
COPB1-208ENST00000532088 IL1R2P27930 398 aa12.93□□□□□ -0.34
COPB1-208ENST00000532088 HOXC13P31276 330 aa12.93□□□□□ -0.34
COPB1-208ENST00000532088 L1CAMP32004 1257 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms