RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 CDO1Q16878 200 aa14.97□□□□□ -0.01
CPSF1-206ENST00000531480 MANEALQ5VSG8 457 aa14.97□□□□□ -0.01
CPSF1-206ENST00000531480 NAIF1Q69YI7 327 aaPredicted RBP14.97□□□□□ -0.01
CPSF1-206ENST00000531480 FSTL4Q6MZW2 842 aa14.97□□□□□ -0.01
CPSF1-206ENST00000531480 RFWD3Q6PCD5 774 aa14.97□□□□□ -0.01
CPSF1-206ENST00000531480 CYP4V2Q6ZWL3 525 aaPredicted RBP14.97□□□□□ -0.01
CPSF1-206ENST00000531480 KIAA0907Q7Z7F0 614 aaPredicted RBP14.97□□□□□ -0.01
CPSF1-206ENST00000531480 RHOT2Q8IXI1 618 aa14.97□□□□□ -0.01
CPSF1-206ENST00000531480 CCDC105Q8IYK2 499 aa14.97□□□□□ -0.01
CPSF1-206ENST00000531480 FBXL6Q8N531 539 aa14.97□□□□□ -0.01
CPSF1-206ENST00000531480 RFFLQ8WZ73 363 aa14.97□□□□□ -0.01
CPSF1-206ENST00000531480 EZH1Q92800 747 aaPredicted RBP14.97□□□□□ -0.01
CPSF1-206ENST00000531480 RNF34Q969K3 372 aa14.97□□□□□ -0.01
CPSF1-206ENST00000531480 EXOC4Q96A65 974 aa14.97□□□□□ -0.01
CPSF1-206ENST00000531480 TMA16Q96EY4 203 aaKnown RBP14.97□□□□□ -0.01
CPSF1-206ENST00000531480 P2RY13Q9BPV8 354 aa14.97□□□□□ -0.01
CPSF1-206ENST00000531480 NCAPGQ9BPX3 1015 aa14.97□□□□□ -0.01
CPSF1-206ENST00000531480 OSBPL2Q9H1P3 480 aa14.97□□□□□ -0.01
CPSF1-206ENST00000531480 FBRSL1Q9HCM7 1045 aaKnown RBP14.97□□□□□ -0.01
CPSF1-206ENST00000531480 REXO2Q9Y3B8 237 aaKnown RBP14.97□□□□□ -0.01
CPSF1-206ENST00000531480 MTF2Q9Y483 593 aaPredicted RBP14.97□□□□□ -0.01
CPSF1-206ENST00000531480 DRGXA6NNA5 263 aa14.96□□□□□ -0.01
CPSF1-206ENST00000531480 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.96□□□□□ -0.01
CPSF1-206ENST00000531480 LRCH4O75427 683 aa14.96□□□□□ -0.01
CPSF1-206ENST00000531480 DRD1P21728 446 aa14.96□□□□□ -0.01
CPSF1-206ENST00000531480 SLC6A11P48066 632 aa14.96□□□□□ -0.01
CPSF1-206ENST00000531480 MESP2Q0VG99 397 aa14.96□□□□□ -0.01
CPSF1-206ENST00000531480 PON2Q15165 354 aa14.96□□□□□ -0.01
CPSF1-206ENST00000531480 ANO4Q32M45 955 aa14.96□□□□□ -0.01
CPSF1-206ENST00000531480 TTC39BQ5VTQ0 682 aaPredicted RBP14.96□□□□□ -0.01
CPSF1-206ENST00000531480 RAP1GAP2Q684P5 730 aa14.96□□□□□ -0.01
CPSF1-206ENST00000531480 ASTLQ6HA08 431 aaPredicted RBP14.96□□□□□ -0.01
CPSF1-206ENST00000531480 FBXL22Q6P050 247 aa14.96□□□□□ -0.01
CPSF1-206ENST00000531480 SYNPOQ8N3V7 929 aa14.96□□□□□ -0.01
CPSF1-206ENST00000531480 CCDC185Q8N715 623 aa14.96□□□□□ -0.01
CPSF1-206ENST00000531480 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.96□□□□□ -0.01
CPSF1-206ENST00000531480 HJURPQ8NCD3 748 aaPredicted RBP14.96□□□□□ -0.01
CPSF1-206ENST00000531480 CCDC112Q8NEF3 446 aa14.96□□□□□ -0.01
CPSF1-206ENST00000531480 ZNF564Q8TBZ8 553 aaPredicted RBP14.96□□□□□ -0.01
CPSF1-206ENST00000531480 PBXIP1Q96AQ6 731 aa14.96□□□□□ -0.01
CPSF1-206ENST00000531480 LMLNQ96KR4 655 aa14.96□□□□□ -0.01
CPSF1-206ENST00000531480 XPO6Q96QU8 1125 aaKnown RBP14.96□□□□□ -0.01
CPSF1-206ENST00000531480 PNKPQ96T60 521 aa14.96□□□□□ -0.01
CPSF1-206ENST00000531480 FOXQ1Q9C009 403 aa14.96□□□□□ -0.01
CPSF1-206ENST00000531480 TMPRSS4Q9NRS4 437 aa14.96□□□□□ -0.01
CPSF1-206ENST00000531480 IP6K2Q9UHH9 426 aa14.96□□□□□ -0.01
CPSF1-206ENST00000531480 NEU3Q9UQ49 428 aa14.96□□□□□ -0.01
CPSF1-206ENST00000531480 PCDHA13Q9Y5I0 950 aa14.96□□□□□ -0.01
CPSF1-206ENST00000531480 A0A0A6YYK5 440 aaPredicted RBP14.95□□□□□ -0.02
CPSF1-206ENST00000531480 FAM170BA6NMN3 283 aa14.95□□□□□ -0.02
CPSF1-206ENST00000531480 BTNL10A8MVZ5 291 aa14.95□□□□□ -0.02
CPSF1-206ENST00000531480 F5H5T6 163 aa14.95□□□□□ -0.02
CPSF1-206ENST00000531480 MYO1FO00160 1098 aa14.95□□□□□ -0.02
CPSF1-206ENST00000531480 DESP17661 470 aa14.95□□□□□ -0.02
CPSF1-206ENST00000531480 GRIA2P42262 883 aa14.95□□□□□ -0.02
CPSF1-206ENST00000531480 MAGEA1P43355 309 aa14.95□□□□□ -0.02
CPSF1-206ENST00000531480 MAGEA9P43362 315 aa14.95□□□□□ -0.02
CPSF1-206ENST00000531480 RPS24P62847 133 aaKnown RBP14.95□□□□□ -0.02
CPSF1-206ENST00000531480 SEMA3BQ13214 749 aa14.95□□□□□ -0.02
CPSF1-206ENST00000531480 SPA17Q15506 151 aa14.95□□□□□ -0.02
CPSF1-206ENST00000531480 ARL13BQ3SXY8 428 aa14.95□□□□□ -0.02
CPSF1-206ENST00000531480 FBXO43Q4G163 708 aa14.95□□□□□ -0.02
CPSF1-206ENST00000531480 PREPLQ4J6C6 727 aaPredicted RBP14.95□□□□□ -0.02
CPSF1-206ENST00000531480 DGKKQ5KSL6 1271 aa14.95□□□□□ -0.02
CPSF1-206ENST00000531480 MAMSTRQ6ZN01 415 aa14.95□□□□□ -0.02
CPSF1-206ENST00000531480 C14orf80Q86SX3 495 aa14.95□□□□□ -0.02
CPSF1-206ENST00000531480 CHSY1Q86X52 802 aa14.95□□□□□ -0.02
CPSF1-206ENST00000531480 PSTKQ8IV42 348 aaKnown RBP14.95□□□□□ -0.02
CPSF1-206ENST00000531480 LRRC8AQ8IWT6 810 aa14.95□□□□□ -0.02
CPSF1-206ENST00000531480 LGI2Q8N0V4 545 aa14.95□□□□□ -0.02
CPSF1-206ENST00000531480 ZNF557Q8N988 423 aaPredicted RBP14.95□□□□□ -0.02
CPSF1-206ENST00000531480 SLC35G2Q8TBE7 412 aa14.95□□□□□ -0.02
CPSF1-206ENST00000531480 DDI1Q8WTU0 396 aa14.95□□□□□ -0.02
CPSF1-206ENST00000531480 RETREG1Q9H6L5 497 aa14.95□□□□□ -0.02
CPSF1-206ENST00000531480 OSGEPQ9NPF4 335 aa14.95□□□□□ -0.02
CPSF1-206ENST00000531480 PLK2Q9NYY3 685 aa14.95□□□□□ -0.02
CPSF1-206ENST00000531480 DEC1Q9P2X7 70 aa14.95□□□□□ -0.02
CPSF1-206ENST00000531480 PPARGC1AQ9UBK2 798 aaKnown RBP14.95□□□□□ -0.02
CPSF1-206ENST00000531480 ZNF212Q9UDV6 495 aa14.95□□□□□ -0.02
CPSF1-206ENST00000531480 ANAPC7Q9UJX3 599 aa14.95□□□□□ -0.02
CPSF1-206ENST00000531480 FZD10Q9ULW2 581 aa14.95□□□□□ -0.02
CPSF1-206ENST00000531480 CLEC4EQ9ULY5 219 aa14.95□□□□□ -0.02
CPSF1-206ENST00000531480 SIT1Q9Y3P8 196 aa14.95□□□□□ -0.02
CPSF1-206ENST00000531480 MUC22E2RYF6 1773 aaPredicted RBP14.94□□□□□ -0.02
CPSF1-206ENST00000531480 K7EQS6 105 aa14.94□□□□□ -0.02
CPSF1-206ENST00000531480 NCAM2O15394 837 aa14.94□□□□□ -0.02
CPSF1-206ENST00000531480 PJA2O43164 708 aa14.94□□□□□ -0.02
CPSF1-206ENST00000531480 PI15O43692 258 aa14.94□□□□□ -0.02
CPSF1-206ENST00000531480 TSPAN3O60637 253 aa14.94□□□□□ -0.02
CPSF1-206ENST00000531480 RNF8O76064 485 aa14.94□□□□□ -0.02
CPSF1-206ENST00000531480 KAT7O95251 611 aa14.94□□□□□ -0.02
CPSF1-206ENST00000531480 MIPP30301 263 aa14.94□□□□□ -0.02
CPSF1-206ENST00000531480 HOXC13P31276 330 aa14.94□□□□□ -0.02
CPSF1-206ENST00000531480 MAN1A1P33908 653 aa14.94□□□□□ -0.02
CPSF1-206ENST00000531480 ARHGAP25P42331 645 aa14.94□□□□□ -0.02
CPSF1-206ENST00000531480 GRSF1Q12849 480 aaKnown RBP eCLIP14.94□□□□□ -0.02
CPSF1-206ENST00000531480 CHST9Q7L1S5 443 aa14.94□□□□□ -0.02
CPSF1-206ENST00000531480 SLFN11Q7Z7L1 901 aa14.94□□□□□ -0.02
CPSF1-206ENST00000531480 NAT16Q8N8M0 369 aa14.94□□□□□ -0.02
CPSF1-206ENST00000531480 TERB1Q8NA31 727 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms