RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-219ENST00000530990 HS3ST4Q9Y661 456 aa12.3□□□□□ -0.44
LTBP3-219ENST00000530990 A0A087X0T9 212 aa12.29□□□□□ -0.44
LTBP3-219ENST00000530990 TYW5A2RUC4 315 aaKnown RBP12.29□□□□□ -0.44
LTBP3-219ENST00000530990 SIGLEC16A6NMB1 481 aa12.29□□□□□ -0.44
LTBP3-219ENST00000530990 F5H5T6 163 aa12.29□□□□□ -0.44
LTBP3-219ENST00000530990 CCP110O43303 1012 aa12.29□□□□□ -0.44
LTBP3-219ENST00000530990 RTN2O75298 545 aa12.29□□□□□ -0.44
LTBP3-219ENST00000530990 FAM228BP0C875 321 aa12.29□□□□□ -0.44
LTBP3-219ENST00000530990 SP9P0CG40 484 aa12.29□□□□□ -0.44
LTBP3-219ENST00000530990 TDGF1P13385 188 aa12.29□□□□□ -0.44
LTBP3-219ENST00000530990 HLA-FP30511 346 aa12.29□□□□□ -0.44
LTBP3-219ENST00000530990 TIE1P35590 1138 aa12.29□□□□□ -0.44
LTBP3-219ENST00000530990 TNFRSF4P43489 277 aa12.29□□□□□ -0.44
LTBP3-219ENST00000530990 CXCL12P48061 93 aa12.29□□□□□ -0.44
LTBP3-219ENST00000530990 ZNF75DP51815 510 aa12.29□□□□□ -0.44
LTBP3-219ENST00000530990 OGDHQ02218 1023 aa12.29□□□□□ -0.44
LTBP3-219ENST00000530990 CSTF1Q05048 431 aaKnown RBP12.29□□□□□ -0.44
LTBP3-219ENST00000530990 MPP7Q5T2T1 576 aa12.29□□□□□ -0.44
LTBP3-219ENST00000530990 EGFLAMQ63HQ2 1017 aa12.29□□□□□ -0.44
LTBP3-219ENST00000530990 PLEKHA7Q6IQ23 1121 aa12.29□□□□□ -0.44
LTBP3-219ENST00000530990 ANKS1BQ7Z6G8 1248 aa12.29□□□□□ -0.44
LTBP3-219ENST00000530990 CIR1Q86X95 450 aaPredicted RBP12.29□□□□□ -0.44
LTBP3-219ENST00000530990 CFAP52Q8N1V2 620 aa12.29□□□□□ -0.44
LTBP3-219ENST00000530990 CCDC33Q8N5R6 958 aa12.29□□□□□ -0.44
LTBP3-219ENST00000530990 ALLCQ8N6M5 410 aa12.29□□□□□ -0.44
LTBP3-219ENST00000530990 IL17RCQ8NAC3 791 aa12.29□□□□□ -0.44
LTBP3-219ENST00000530990 OR8K1Q8NGG5 319 aa12.29□□□□□ -0.44
LTBP3-219ENST00000530990 CCDC26Q8TAB7 109 aa12.29□□□□□ -0.44
LTBP3-219ENST00000530990 FAM172AQ8WUF8 416 aa12.29□□□□□ -0.44
LTBP3-219ENST00000530990 ACDQ96AP0 544 aa12.29□□□□□ -0.44
LTBP3-219ENST00000530990 SLC2A11Q9BYW1 496 aa12.29□□□□□ -0.44
LTBP3-219ENST00000530990 IRX2Q9BZI1 471 aaPredicted RBP12.29□□□□□ -0.44
LTBP3-219ENST00000530990 ISCUQ9H1K1 167 aa12.29□□□□□ -0.44
LTBP3-219ENST00000530990 WDCPQ9H6R7 721 aa12.29□□□□□ -0.44
LTBP3-219ENST00000530990 FAM86C1Q9NVL1 165 aa12.29□□□□□ -0.44
LTBP3-219ENST00000530990 CNOT8Q9UFF9 292 aaKnown RBP12.29□□□□□ -0.44
LTBP3-219ENST00000530990 SLC12A6Q9UHW9 1150 aa12.29□□□□□ -0.44
LTBP3-219ENST00000530990 SNX10Q9Y5X0 201 aa12.29□□□□□ -0.44
LTBP3-219ENST00000530990 CKAP5Q14008 2032 aa12.28□□□□□ -0.44
LTBP3-219ENST00000530990 K7ESF4 209 aa12.28□□□□□ -0.44
LTBP3-219ENST00000530990 ATG13O75143 517 aa12.28□□□□□ -0.44
LTBP3-219ENST00000530990 ENDOD1O94919 500 aa12.28□□□□□ -0.44
LTBP3-219ENST00000530990 LUC7L3O95232 432 aaKnown RBP12.28□□□□□ -0.44
LTBP3-219ENST00000530990 PAPSS2O95340 614 aaPredicted RBP12.28□□□□□ -0.44
LTBP3-219ENST00000530990 KLF8O95600 359 aaPredicted RBP12.28□□□□□ -0.44
LTBP3-219ENST00000530990 EIF4A3P38919 411 aaKnown RBP12.28□□□□□ -0.44
LTBP3-219ENST00000530990 IRAK1P51617 712 aa12.28□□□□□ -0.44
LTBP3-219ENST00000530990 ZNF143P52747 638 aaPredicted RBP12.28□□□□□ -0.44
LTBP3-219ENST00000530990 HDAC4P56524 1084 aa12.28□□□□□ -0.44
LTBP3-219ENST00000530990 MRPS21P82921 87 aaKnown RBP12.28□□□□□ -0.44
LTBP3-219ENST00000530990 MAMLD1Q13495 774 aa12.28□□□□□ -0.44
LTBP3-219ENST00000530990 AUHQ13825 339 aaKnown RBP12.28□□□□□ -0.44
LTBP3-219ENST00000530990 DMC1Q14565 340 aa12.28□□□□□ -0.44
LTBP3-219ENST00000530990 FBXL22Q6P050 247 aa12.28□□□□□ -0.44
LTBP3-219ENST00000530990 DCUN1D2Q6PH85 259 aa12.28□□□□□ -0.44
LTBP3-219ENST00000530990 NUDT18Q6ZVK8 323 aa12.28□□□□□ -0.44
LTBP3-219ENST00000530990 SYT13Q7L8C5 426 aa12.28□□□□□ -0.44
LTBP3-219ENST00000530990 STRADAQ7RTN6 431 aa12.28□□□□□ -0.44
LTBP3-219ENST00000530990 CNGA4Q8IV77 575 aa12.28□□□□□ -0.44
LTBP3-219ENST00000530990 MFN1Q8IWA4 741 aa12.28□□□□□ -0.44
LTBP3-219ENST00000530990 DRC7Q8IY82 874 aa12.28□□□□□ -0.44
LTBP3-219ENST00000530990 CARNMT1Q8N4J0 409 aa12.28□□□□□ -0.44
LTBP3-219ENST00000530990 ZNF513Q8N8E2 541 aaPredicted RBP12.28□□□□□ -0.44
LTBP3-219ENST00000530990 TXNDC5Q8NBS9 432 aaKnown RBP12.28□□□□□ -0.44
LTBP3-219ENST00000530990 CENPIQ92674 756 aaPredicted RBP12.28□□□□□ -0.44
LTBP3-219ENST00000530990 IGSF8Q969P0 613 aa12.28□□□□□ -0.44
LTBP3-219ENST00000530990 TRIM11Q96F44 468 aa12.28□□□□□ -0.44
LTBP3-219ENST00000530990 MRFAP1L1Q96HT8 127 aa12.28□□□□□ -0.44
LTBP3-219ENST00000530990 SIK2Q9H0K1 926 aa12.28□□□□□ -0.44
LTBP3-219ENST00000530990 IRF2BPLQ9H1B7 796 aa12.28□□□□□ -0.44
LTBP3-219ENST00000530990 ABCB8Q9NUT2 735 aa12.28□□□□□ -0.44
LTBP3-219ENST00000530990 PARVAQ9NVD7 372 aa12.28□□□□□ -0.44
LTBP3-219ENST00000530990 VANGL2Q9ULK5 521 aa12.28□□□□□ -0.44
LTBP3-219ENST00000530990 MMP17Q9ULZ9 603 aa12.28□□□□□ -0.44
LTBP3-219ENST00000530990 NENFQ9UMX5 172 aa12.28□□□□□ -0.44
LTBP3-219ENST00000530990 PAXBP1Q9Y5B6 917 aa12.28□□□□□ -0.44
LTBP3-219ENST00000530990 ANKRD62A6NC57 917 aa12.27□□□□□ -0.45
LTBP3-219ENST00000530990 AKR1B15C9JRZ8 316 aaPredicted RBP12.27□□□□□ -0.45
LTBP3-219ENST00000530990 SGK1O00141 431 aa12.27□□□□□ -0.45
LTBP3-219ENST00000530990 ADAM23O75077 832 aa12.27□□□□□ -0.45
LTBP3-219ENST00000530990 MYBL1P10243 752 aa12.27□□□□□ -0.45
LTBP3-219ENST00000530990 PABPC1P11940 636 aaKnown RBP12.27□□□□□ -0.45
LTBP3-219ENST00000530990 HNRNPLP14866 589 aaKnown RBP eCLIP12.27□□□□□ -0.45
LTBP3-219ENST00000530990 CD70P32970 193 aa12.27□□□□□ -0.45
LTBP3-219ENST00000530990 GFPT1Q06210 699 aaPredicted RBP12.27□□□□□ -0.45
LTBP3-219ENST00000530990 DMWDQ09019 674 aa12.27□□□□□ -0.45
LTBP3-219ENST00000530990 ZNF252P-AS1Q0IIN9 211 aa12.27□□□□□ -0.45
LTBP3-219ENST00000530990 MTA1Q13330 715 aa12.27□□□□□ -0.45
LTBP3-219ENST00000530990 MAPK8IP2Q13387 824 aaPredicted RBP12.27□□□□□ -0.45
LTBP3-219ENST00000530990 CDH18Q13634 790 aa12.27□□□□□ -0.45
LTBP3-219ENST00000530990 ZNF528Q3MIS6 628 aa12.27□□□□□ -0.45
LTBP3-219ENST00000530990 RABGAP1LQ5R372 815 aa12.27□□□□□ -0.45
LTBP3-219ENST00000530990 TMEM215Q68D42 235 aa12.27□□□□□ -0.45
LTBP3-219ENST00000530990 ALKBH5Q6P6C2 394 aaKnown RBP12.27□□□□□ -0.45
LTBP3-219ENST00000530990 C14orf80Q86SX3 495 aa12.27□□□□□ -0.45
LTBP3-219ENST00000530990 CCDC185Q8N715 623 aa12.27□□□□□ -0.45
LTBP3-219ENST00000530990 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.27□□□□□ -0.45
LTBP3-219ENST00000530990 ATOH1Q92858 354 aaPredicted RBP12.27□□□□□ -0.45
LTBP3-219ENST00000530990 RPRD1AQ96P16 312 aaPredicted RBP12.27□□□□□ -0.45
LTBP3-219ENST00000530990 HHIPQ96QV1 700 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 142.9 ms