RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 MAN2B1O00754 1011 aa16.58■□□□□ 0.24
BRK1-201ENST00000530758 TRDMT1O14717 391 aaKnown RBP16.58■□□□□ 0.24
BRK1-201ENST00000530758 CACNG3O60359 315 aa16.58■□□□□ 0.24
BRK1-201ENST00000530758 CYBBP04839 570 aa16.58■□□□□ 0.24
BRK1-201ENST00000530758 TYRP14679 529 aa16.58■□□□□ 0.24
BRK1-201ENST00000530758 L1CAMP32004 1257 aa16.58■□□□□ 0.24
BRK1-201ENST00000530758 OPRD1P41143 372 aa16.58■□□□□ 0.24
BRK1-201ENST00000530758 SLC25A11Q02978 314 aaKnown RBP16.58■□□□□ 0.24
BRK1-201ENST00000530758 SEMA3BQ13214 749 aa16.58■□□□□ 0.24
BRK1-201ENST00000530758 MANEALQ5VSG8 457 aa16.58■□□□□ 0.24
BRK1-201ENST00000530758 TTC39BQ5VTQ0 682 aaPredicted RBP16.58■□□□□ 0.24
BRK1-201ENST00000530758 RAP1GAP2Q684P5 730 aa16.58■□□□□ 0.24
BRK1-201ENST00000530758 SCYL2Q6P3W7 929 aa16.58■□□□□ 0.24
BRK1-201ENST00000530758 RFWD3Q6PCD5 774 aa16.58■□□□□ 0.24
BRK1-201ENST00000530758 TPGS1Q6ZTW0 290 aa16.58■□□□□ 0.24
BRK1-201ENST00000530758 BMP8AQ7Z5Y6 402 aa16.58■□□□□ 0.24
BRK1-201ENST00000530758 KIAA1328Q86T90 577 aa16.58■□□□□ 0.24
BRK1-201ENST00000530758 RNF10Q8N5U6 811 aaKnown RBP16.58■□□□□ 0.24
BRK1-201ENST00000530758 TEKT4Q8WW24 435 aa16.58■□□□□ 0.24
BRK1-201ENST00000530758 MYEOVQ96EZ4 313 aa16.58■□□□□ 0.24
BRK1-201ENST00000530758 SHDQ96IW2 340 aa16.58■□□□□ 0.24
BRK1-201ENST00000530758 PRICKLE1Q96MT3 831 aaPredicted RBP16.58■□□□□ 0.24
BRK1-201ENST00000530758 PEBP4Q96S96 227 aa16.58■□□□□ 0.24
BRK1-201ENST00000530758 BBS2Q9BXC9 721 aa16.58■□□□□ 0.24
BRK1-201ENST00000530758 SLC2A11Q9BYW1 496 aa16.58■□□□□ 0.24
BRK1-201ENST00000530758 ARHGEF3Q9NR81 526 aa16.58■□□□□ 0.24
BRK1-201ENST00000530758 TMPRSS4Q9NRS4 437 aa16.58■□□□□ 0.24
BRK1-201ENST00000530758 OR12D3Q9UGF7 316 aa16.58■□□□□ 0.24
BRK1-201ENST00000530758 ZDBF2Q9HCK1 2354 aa16.58■□□□□ 0.24
BRK1-201ENST00000530758 F5H5T6 163 aa16.57■□□□□ 0.24
BRK1-201ENST00000530758 PRPSAP2O60256 369 aa16.57■□□□□ 0.24
BRK1-201ENST00000530758 PDGFBP01127 241 aaPredicted RBP16.57■□□□□ 0.24
BRK1-201ENST00000530758 PTMAP06454 111 aaKnown RBP16.57■□□□□ 0.24
BRK1-201ENST00000530758 CCDC175P0C221 793 aa16.57■□□□□ 0.24
BRK1-201ENST00000530758 CISD3P0C7P0 127 aa16.57■□□□□ 0.24
BRK1-201ENST00000530758 IL1R2P27930 398 aa16.57■□□□□ 0.24
BRK1-201ENST00000530758 HOXD9P28356 352 aaPredicted RBP16.57■□□□□ 0.24
BRK1-201ENST00000530758 HTR7P34969 479 aa16.57■□□□□ 0.24
BRK1-201ENST00000530758 NOP2P46087 812 aaKnown RBP16.57■□□□□ 0.24
BRK1-201ENST00000530758 ZNF135P52742 658 aaPredicted RBP16.57■□□□□ 0.24
BRK1-201ENST00000530758 MESDQ14696 234 aa16.57■□□□□ 0.24
BRK1-201ENST00000530758 ANO4Q32M45 955 aa16.57■□□□□ 0.24
BRK1-201ENST00000530758 C14orf80Q86SX3 495 aa16.57■□□□□ 0.24
BRK1-201ENST00000530758 CHSY1Q86X52 802 aa16.57■□□□□ 0.24
BRK1-201ENST00000530758 SUGP1Q8IWZ8 645 aaKnown RBP16.57■□□□□ 0.24
BRK1-201ENST00000530758 LGI2Q8N0V4 545 aa16.57■□□□□ 0.24
BRK1-201ENST00000530758 ZNF687Q8N1G0 1237 aa16.57■□□□□ 0.24
BRK1-201ENST00000530758 PHTF2Q8N3S3 785 aa16.57■□□□□ 0.24
BRK1-201ENST00000530758 ZNF557Q8N988 423 aaPredicted RBP16.57■□□□□ 0.24
BRK1-201ENST00000530758 HJURPQ8NCD3 748 aaPredicted RBP16.57■□□□□ 0.24
BRK1-201ENST00000530758 TPCN2Q8NHX9 752 aa16.57■□□□□ 0.24
BRK1-201ENST00000530758 FAM71BQ8TC56 605 aa16.57■□□□□ 0.24
BRK1-201ENST00000530758 DDI1Q8WTU0 396 aa16.57■□□□□ 0.24
BRK1-201ENST00000530758 IGSF8Q969P0 613 aa16.57■□□□□ 0.24
BRK1-201ENST00000530758 XPO6Q96QU8 1125 aaKnown RBP16.57■□□□□ 0.24
BRK1-201ENST00000530758 NELL2Q99435 816 aa16.57■□□□□ 0.24
BRK1-201ENST00000530758 SIK2Q9H0K1 926 aa16.57■□□□□ 0.24
BRK1-201ENST00000530758 CHD5Q8TDI0 1954 aa16.57■□□□□ 0.24
BRK1-201ENST00000530758 NEDD8-MDP1E9PL57 170 aa16.56■□□□□ 0.24
BRK1-201ENST00000530758 BUB1BO60566 1050 aaPredicted RBP16.56■□□□□ 0.24
BRK1-201ENST00000530758 TSPAN3O60637 253 aa16.56■□□□□ 0.24
BRK1-201ENST00000530758 TCF4P15884 667 aa16.56■□□□□ 0.24
BRK1-201ENST00000530758 HOXC13P31276 330 aa16.56■□□□□ 0.24
BRK1-201ENST00000530758 SOX9P48436 509 aa16.56■□□□□ 0.24
BRK1-201ENST00000530758 GALK1P51570 392 aa16.56■□□□□ 0.24
BRK1-201ENST00000530758 SGSHP51688 502 aa16.56■□□□□ 0.24
BRK1-201ENST00000530758 VCPP55072 806 aaKnown RBP16.56■□□□□ 0.24
BRK1-201ENST00000530758 HADHQ16836 314 aaKnown RBP16.56■□□□□ 0.24
BRK1-201ENST00000530758 TMEM196Q5HYL7 178 aa16.56■□□□□ 0.24
BRK1-201ENST00000530758 EFHC2Q5JST6 749 aa16.56■□□□□ 0.24
BRK1-201ENST00000530758 RABGAP1LQ5R372 815 aa16.56■□□□□ 0.24
BRK1-201ENST00000530758 LRRC38Q5VT99 294 aa16.56■□□□□ 0.24
BRK1-201ENST00000530758 DAB2IPQ5VWQ8 1189 aa16.56■□□□□ 0.24
BRK1-201ENST00000530758 C11orf63Q6NUN7 778 aa16.56■□□□□ 0.24
BRK1-201ENST00000530758 TXNDC11Q6PKC3 985 aa16.56■□□□□ 0.24
BRK1-201ENST00000530758 LRRC31Q6UY01 552 aa16.56■□□□□ 0.24
BRK1-201ENST00000530758 ZNF852Q6ZMS4 543 aa16.56■□□□□ 0.24
BRK1-201ENST00000530758 POLNQ7Z5Q5 900 aa16.56■□□□□ 0.24
BRK1-201ENST00000530758 KIAA0907Q7Z7F0 614 aaPredicted RBP16.56■□□□□ 0.24
BRK1-201ENST00000530758 TTC8Q8TAM2 541 aa16.56■□□□□ 0.24
BRK1-201ENST00000530758 UBE2Q2Q8WVN8 375 aa16.56■□□□□ 0.24
BRK1-201ENST00000530758 EXOC4Q96A65 974 aa16.56■□□□□ 0.24
BRK1-201ENST00000530758 LMLNQ96KR4 655 aa16.56■□□□□ 0.24
BRK1-201ENST00000530758 SNRNP25Q9BV90 132 aaKnown RBP16.56■□□□□ 0.24
BRK1-201ENST00000530758 MAGEB5Q9BZ81 275 aa16.56■□□□□ 0.24
BRK1-201ENST00000530758 OSBPL6Q9BZF3 934 aa16.56■□□□□ 0.24
BRK1-201ENST00000530758 TSGA10Q9BZW7 698 aa16.56■□□□□ 0.24
BRK1-201ENST00000530758 PCSK1NQ9UHG2 260 aa16.56■□□□□ 0.24
BRK1-201ENST00000530758 FBXL21Q9UKT6 434 aa16.56■□□□□ 0.24
BRK1-201ENST00000530758 VANGL2Q9ULK5 521 aa16.56■□□□□ 0.24
BRK1-201ENST00000530758 CA14Q9ULX7 337 aa16.56■□□□□ 0.24
BRK1-201ENST00000530758 SLC27A6Q9Y2P4 619 aa16.56■□□□□ 0.24
BRK1-201ENST00000530758 ALG6Q9Y672 507 aa16.56■□□□□ 0.24
BRK1-201ENST00000530758 A0A0U1RQJ8 604 aa16.55■□□□□ 0.24
BRK1-201ENST00000530758 KANSL1LA0AUZ9 987 aa16.55■□□□□ 0.24
BRK1-201ENST00000530758 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.55■□□□□ 0.24
BRK1-201ENST00000530758 E9PAM4 449 aa16.55■□□□□ 0.24
BRK1-201ENST00000530758 FAM72CH0Y354 149 aa16.55■□□□□ 0.24
BRK1-201ENST00000530758 KRT86O43790 486 aa16.55■□□□□ 0.24
BRK1-201ENST00000530758 TULP3O75386 442 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms