RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 RPAP2Q8IXW5 612 aaPredicted RBP6.99□□□□□ -1.29
CAPRIN1-208ENST00000530008 PNPLA1Q8N8W4 532 aa6.99□□□□□ -1.29
CAPRIN1-208ENST00000530008 TOR1AIP2Q8NFQ8 470 aa6.99□□□□□ -1.29
CAPRIN1-208ENST00000530008 USP6NLQ92738 828 aa6.99□□□□□ -1.29
CAPRIN1-208ENST00000530008 EDAQ92838 391 aa6.99□□□□□ -1.29
CAPRIN1-208ENST00000530008 SH3KBP1Q96B97 665 aa6.99□□□□□ -1.29
CAPRIN1-208ENST00000530008 KIF1BPQ96EK5 621 aa6.99□□□□□ -1.29
CAPRIN1-208ENST00000530008 ELOVL1Q9BW60 279 aa6.99□□□□□ -1.29
CAPRIN1-208ENST00000530008 CINPQ9BW66 212 aaPredicted RBP6.99□□□□□ -1.29
CAPRIN1-208ENST00000530008 SSBP3Q9BWW4 388 aaPredicted RBP6.99□□□□□ -1.29
CAPRIN1-208ENST00000530008 SYNCQ9H7C4 482 aa6.99□□□□□ -1.29
CAPRIN1-208ENST00000530008 SEPT11Q9NVA2 429 aaKnown RBP6.99□□□□□ -1.29
CAPRIN1-208ENST00000530008 HCN3Q9P1Z3 774 aa6.99□□□□□ -1.29
CAPRIN1-208ENST00000530008 MGAT4CQ9UBM8 478 aa6.99□□□□□ -1.29
CAPRIN1-208ENST00000530008 SARDHQ9UL12 918 aa6.99□□□□□ -1.29
CAPRIN1-208ENST00000530008 SYNDIG1LA6NDD5 238 aa6.98□□□□□ -1.29
CAPRIN1-208ENST00000530008 NPIPB15A6NHN6 443 aaPredicted RBP6.98□□□□□ -1.29
CAPRIN1-208ENST00000530008 AP4M1O00189 453 aa6.98□□□□□ -1.29
CAPRIN1-208ENST00000530008 CES2O00748 559 aa6.98□□□□□ -1.29
CAPRIN1-208ENST00000530008 PROM1O43490 865 aa6.98□□□□□ -1.29
CAPRIN1-208ENST00000530008 TNFSF14O43557 240 aa6.98□□□□□ -1.29
CAPRIN1-208ENST00000530008 METTL18O95568 372 aa6.98□□□□□ -1.29
CAPRIN1-208ENST00000530008 STARD3NLO95772 234 aa6.98□□□□□ -1.29
CAPRIN1-208ENST00000530008 PORP16435 677 aaPredicted RBP6.98□□□□□ -1.29
CAPRIN1-208ENST00000530008 MATN1P21941 496 aa6.98□□□□□ -1.29
CAPRIN1-208ENST00000530008 PDE1AP54750 535 aa6.98□□□□□ -1.29
CAPRIN1-208ENST00000530008 TPTEP56180 551 aa6.98□□□□□ -1.29
CAPRIN1-208ENST00000530008 WTAPQ15007 396 aa6.98□□□□□ -1.29
CAPRIN1-208ENST00000530008 HS1BP3Q53T59 392 aa6.98□□□□□ -1.29
CAPRIN1-208ENST00000530008 KLHL24Q6TFL4 600 aa6.98□□□□□ -1.29
CAPRIN1-208ENST00000530008 SIRT6Q8N6T7 355 aa6.98□□□□□ -1.29
CAPRIN1-208ENST00000530008 POU5F2Q8N7G0 328 aa6.98□□□□□ -1.29
CAPRIN1-208ENST00000530008 TNIP2Q8NFZ5 429 aa6.98□□□□□ -1.29
CAPRIN1-208ENST00000530008 PGBD1Q96JS3 809 aa6.98□□□□□ -1.29
CAPRIN1-208ENST00000530008 NR1H4Q96RI1 486 aaPredicted RBP6.98□□□□□ -1.29
CAPRIN1-208ENST00000530008 EYA3Q99504 573 aa6.98□□□□□ -1.29
CAPRIN1-208ENST00000530008 ALG8Q9BVK2 526 aa6.98□□□□□ -1.29
CAPRIN1-208ENST00000530008 RANBP17Q9H2T7 1088 aaKnown RBP6.98□□□□□ -1.29
CAPRIN1-208ENST00000530008 KCND2Q9NZV8 630 aa6.98□□□□□ -1.29
CAPRIN1-208ENST00000530008 DKK2Q9UBU2 259 aa6.98□□□□□ -1.29
CAPRIN1-208ENST00000530008 VPS4AQ9UN37 437 aa6.98□□□□□ -1.29
CAPRIN1-208ENST00000530008 UNC119BA6NIH7 251 aa6.97□□□□□ -1.29
CAPRIN1-208ENST00000530008 NPIPB13A6NJU9 1138 aa6.97□□□□□ -1.29
CAPRIN1-208ENST00000530008 NPIPB5A8MRT5 1133 aa6.97□□□□□ -1.29
CAPRIN1-208ENST00000530008 NPIPB4C9JG80 1138 aa6.97□□□□□ -1.29
CAPRIN1-208ENST00000530008 TMEM232C9JQI7 657 aa6.97□□□□□ -1.29
CAPRIN1-208ENST00000530008 P4HA2O15460 535 aa6.97□□□□□ -1.29
CAPRIN1-208ENST00000530008 SPDEFO95238 335 aa6.97□□□□□ -1.29
CAPRIN1-208ENST00000530008 ARSAP15289 507 aa6.97□□□□□ -1.29
CAPRIN1-208ENST00000530008 IGFBP2P18065 325 aa6.97□□□□□ -1.29
CAPRIN1-208ENST00000530008 ZFP36P26651 326 aaKnown RBP6.97□□□□□ -1.29
CAPRIN1-208ENST00000530008 CTGFP29279 349 aa6.97□□□□□ -1.29
CAPRIN1-208ENST00000530008 AVPR2P30518 371 aa6.97□□□□□ -1.29
CAPRIN1-208ENST00000530008 GALNSP34059 522 aa6.97□□□□□ -1.29
CAPRIN1-208ENST00000530008 MVDP53602 400 aa6.97□□□□□ -1.29
CAPRIN1-208ENST00000530008 RARSP54136 660 aaKnown RBP6.97□□□□□ -1.29
CAPRIN1-208ENST00000530008 RAE1P78406 368 aaKnown RBP6.97□□□□□ -1.29
CAPRIN1-208ENST00000530008 CCDC15Q0P6D6 951 aa6.97□□□□□ -1.29
CAPRIN1-208ENST00000530008 UBAP2Q5T6F2 1119 aaKnown RBP6.97□□□□□ -1.29
CAPRIN1-208ENST00000530008 GPR149Q86SP6 731 aa6.97□□□□□ -1.29
CAPRIN1-208ENST00000530008 LNX2Q8N448 690 aa6.97□□□□□ -1.29
CAPRIN1-208ENST00000530008 BEND2Q8NDZ0 799 aa6.97□□□□□ -1.29
CAPRIN1-208ENST00000530008 KCNJ9Q92806 393 aa6.97□□□□□ -1.29
CAPRIN1-208ENST00000530008 KLC2Q9H0B6 622 aa6.97□□□□□ -1.29
CAPRIN1-208ENST00000530008 MUC13Q9H3R2 512 aa6.97□□□□□ -1.29
CAPRIN1-208ENST00000530008 SLC22A11Q9NSA0 550 aa6.97□□□□□ -1.29
CAPRIN1-208ENST00000530008 KLC4Q9NSK0 619 aa6.97□□□□□ -1.29
CAPRIN1-208ENST00000530008 MTMR4Q9NYA4 1195 aa6.97□□□□□ -1.29
CAPRIN1-208ENST00000530008 EHD3Q9NZN3 535 aa6.97□□□□□ -1.29
CAPRIN1-208ENST00000530008 CCNL1Q9UK58 526 aaPredicted RBP6.97□□□□□ -1.29
CAPRIN1-208ENST00000530008 KAT6BQ8WYB5 2073 aa6.97□□□□□ -1.29
CAPRIN1-208ENST00000530008 hCG_1807616A0A1W2PRN6 198 aa6.96□□□□□ -1.3
CAPRIN1-208ENST00000530008 VWC2LB2RUY7 222 aa6.96□□□□□ -1.3
CAPRIN1-208ENST00000530008 TEX22C9J3V5 150 aa6.96□□□□□ -1.3
CAPRIN1-208ENST00000530008 LPXNO60711 386 aa6.96□□□□□ -1.3
CAPRIN1-208ENST00000530008 PRAMEF2O60811 474 aa6.96□□□□□ -1.3
CAPRIN1-208ENST00000530008 NXPH3O95157 252 aa6.96□□□□□ -1.3
CAPRIN1-208ENST00000530008 KAT7O95251 611 aa6.96□□□□□ -1.3
CAPRIN1-208ENST00000530008 CCNDBP1O95273 360 aa6.96□□□□□ -1.3
CAPRIN1-208ENST00000530008 MBPP02686 304 aaPredicted RBP6.96□□□□□ -1.3
CAPRIN1-208ENST00000530008 URODP06132 367 aa6.96□□□□□ -1.3
CAPRIN1-208ENST00000530008 DLDP09622 509 aaKnown RBP6.96□□□□□ -1.3
CAPRIN1-208ENST00000530008 ACRV1P26436 265 aa6.96□□□□□ -1.3
CAPRIN1-208ENST00000530008 HNF1BP35680 557 aa6.96□□□□□ -1.3
CAPRIN1-208ENST00000530008 ARL1P40616 181 aaPredicted RBP6.96□□□□□ -1.3
CAPRIN1-208ENST00000530008 DIO1P49895 249 aa6.96□□□□□ -1.3
CAPRIN1-208ENST00000530008 JAK3P52333 1124 aa6.96□□□□□ -1.3
CAPRIN1-208ENST00000530008 MC1RQ01726 317 aa6.96□□□□□ -1.3
CAPRIN1-208ENST00000530008 CREB5Q02930 508 aa6.96□□□□□ -1.3
CAPRIN1-208ENST00000530008 ACVR2BQ13705 512 aa6.96□□□□□ -1.3
CAPRIN1-208ENST00000530008 ARMC3Q5W041 872 aa6.96□□□□□ -1.3
CAPRIN1-208ENST00000530008 MTHFD1LQ6UB35 978 aa6.96□□□□□ -1.3
CAPRIN1-208ENST00000530008 Q6ZWC4 215 aa6.96□□□□□ -1.3
CAPRIN1-208ENST00000530008 MON1AQ86VX9 555 aa6.96□□□□□ -1.3
CAPRIN1-208ENST00000530008 CNTROBQ8N137 903 aa6.96□□□□□ -1.3
CAPRIN1-208ENST00000530008 TTC39CQ8N584 583 aa6.96□□□□□ -1.3
CAPRIN1-208ENST00000530008 ADOQ96SZ5 270 aa6.96□□□□□ -1.3
CAPRIN1-208ENST00000530008 LBHD1Q9BQE6 289 aaPredicted RBP6.96□□□□□ -1.3
CAPRIN1-208ENST00000530008 CLSTN3Q9BQT9 956 aa6.96□□□□□ -1.3
CAPRIN1-208ENST00000530008 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms