RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 ST8SIA6P61647 398 aa9.39□□□□□ -0.91
VPS11-203ENST00000529545 CFHR1Q03591 330 aa9.39□□□□□ -0.91
VPS11-203ENST00000529545 DNAJC3Q13217 504 aa9.39□□□□□ -0.91
VPS11-203ENST00000529545 NUMA1Q14980 2115 aa9.39□□□□□ -0.91
VPS11-203ENST00000529545 RTP5Q14D33 572 aa9.39□□□□□ -0.91
VPS11-203ENST00000529545 ZACNQ401N2 412 aa9.39□□□□□ -0.91
VPS11-203ENST00000529545 SLC45A4Q5BKX6 768 aa9.39□□□□□ -0.91
VPS11-203ENST00000529545 KCNT1Q5JUK3 1230 aa9.39□□□□□ -0.91
VPS11-203ENST00000529545 HES3Q5TGS1 186 aa9.39□□□□□ -0.91
VPS11-203ENST00000529545 ERICH6BQ5W0A0 696 aa9.39□□□□□ -0.91
VPS11-203ENST00000529545 TMEM215Q68D42 235 aa9.39□□□□□ -0.91
VPS11-203ENST00000529545 AHI1Q8N157 1196 aa9.39□□□□□ -0.91
VPS11-203ENST00000529545 ZNF843Q8N446 348 aa9.39□□□□□ -0.91
VPS11-203ENST00000529545 EID2Q8N6I1 236 aa9.39□□□□□ -0.91
VPS11-203ENST00000529545 ZNF366Q8N895 744 aa9.39□□□□□ -0.91
VPS11-203ENST00000529545 RBBP8NLQ8NC74 664 aaPredicted RBP9.39□□□□□ -0.91
VPS11-203ENST00000529545 SNIP1Q8TAD8 396 aaKnown RBP9.39□□□□□ -0.91
VPS11-203ENST00000529545 PLEKHO2Q8TD55 490 aa9.39□□□□□ -0.91
VPS11-203ENST00000529545 CYB5D2Q8WUJ1 264 aa9.39□□□□□ -0.91
VPS11-203ENST00000529545 TMA16Q96EY4 203 aaKnown RBP9.39□□□□□ -0.91
VPS11-203ENST00000529545 P2RY11Q96G91 374 aa9.39□□□□□ -0.91
VPS11-203ENST00000529545 TMEM176AQ96HP8 235 aa9.39□□□□□ -0.91
VPS11-203ENST00000529545 USP28Q96RU2 1077 aa9.39□□□□□ -0.91
VPS11-203ENST00000529545 ELF4Q99607 663 aaPredicted RBP9.39□□□□□ -0.91
VPS11-203ENST00000529545 ARID3AQ99856 593 aa9.39□□□□□ -0.91
VPS11-203ENST00000529545 C7orf25Q9BPX7 421 aa9.39□□□□□ -0.91
VPS11-203ENST00000529545 TMEM245Q9H330 911 aa9.39□□□□□ -0.91
VPS11-203ENST00000529545 MAGEF1Q9HAY2 307 aa9.39□□□□□ -0.91
VPS11-203ENST00000529545 PRSS16Q9NQE7 514 aa9.39□□□□□ -0.91
VPS11-203ENST00000529545 GDF3Q9NR23 364 aa9.39□□□□□ -0.91
VPS11-203ENST00000529545 AASDHPPTQ9NRN7 309 aa9.39□□□□□ -0.91
VPS11-203ENST00000529545 CLEC4EQ9ULY5 219 aa9.39□□□□□ -0.91
VPS11-203ENST00000529545 USP3Q9Y6I4 520 aa9.39□□□□□ -0.91
VPS11-203ENST00000529545 TP53BP1Q12888 1972 aaPredicted RBP9.39□□□□□ -0.91
VPS11-203ENST00000529545 PVALEFA0A1B0GWK0 134 aa9.38□□□□□ -0.91
VPS11-203ENST00000529545 A0A1W2PPC4 97 aa9.38□□□□□ -0.91
VPS11-203ENST00000529545 IKBKBO14920 756 aa9.38□□□□□ -0.91
VPS11-203ENST00000529545 HLA-DRAP01903 254 aa9.38□□□□□ -0.91
VPS11-203ENST00000529545 DLDP09622 509 aaKnown RBP9.38□□□□□ -0.91
VPS11-203ENST00000529545 SLFN14P0C7P3 912 aa9.38□□□□□ -0.91
VPS11-203ENST00000529545 PABPC1P11940 636 aaKnown RBP9.38□□□□□ -0.91
VPS11-203ENST00000529545 CD58P19256 250 aa9.38□□□□□ -0.91
VPS11-203ENST00000529545 CD38P28907 300 aa9.38□□□□□ -0.91
VPS11-203ENST00000529545 HLA-FP30511 346 aa9.38□□□□□ -0.91
VPS11-203ENST00000529545 ASPAP45381 313 aa9.38□□□□□ -0.91
VPS11-203ENST00000529545 YWHAGP61981 247 aaKnown RBP eCLIP9.38□□□□□ -0.91
VPS11-203ENST00000529545 CXADRP78310 365 aa9.38□□□□□ -0.91
VPS11-203ENST00000529545 INCA1Q0VD86 236 aa9.38□□□□□ -0.91
VPS11-203ENST00000529545 ILKQ13418 452 aa9.38□□□□□ -0.91
VPS11-203ENST00000529545 TAF1BQ53T94 588 aaPredicted RBP9.38□□□□□ -0.91
VPS11-203ENST00000529545 PRAMEF14Q5SWL7 426 aa9.38□□□□□ -0.91
VPS11-203ENST00000529545 MBLAC2Q68D91 279 aa9.38□□□□□ -0.91
VPS11-203ENST00000529545 SPOPLQ6IQ16 392 aa9.38□□□□□ -0.91
VPS11-203ENST00000529545 USP30Q70CQ3 517 aa9.38□□□□□ -0.91
VPS11-203ENST00000529545 SV2AQ7L0J3 742 aa9.38□□□□□ -0.91
VPS11-203ENST00000529545 FAM217AQ8IXS0 508 aa9.38□□□□□ -0.91
VPS11-203ENST00000529545 ZNF557Q8N988 423 aaPredicted RBP9.38□□□□□ -0.91
VPS11-203ENST00000529545 RNF139Q8WU17 664 aa9.38□□□□□ -0.91
VPS11-203ENST00000529545 SLC6A18Q96N87 628 aa9.38□□□□□ -0.91
VPS11-203ENST00000529545 TWNKQ96RR1 684 aa9.38□□□□□ -0.91
VPS11-203ENST00000529545 ZSCAN16Q9H4T2 348 aaPredicted RBP9.38□□□□□ -0.91
VPS11-203ENST00000529545 OLA1Q9NTK5 396 aaKnown RBP9.38□□□□□ -0.91
VPS11-203ENST00000529545 ABCB8Q9NUT2 735 aa9.38□□□□□ -0.91
VPS11-203ENST00000529545 FBXL12Q9NXK8 326 aa9.38□□□□□ -0.91
VPS11-203ENST00000529545 GGA2Q9UJY4 613 aa9.38□□□□□ -0.91
VPS11-203ENST00000529545 FRMD4BQ9Y2L6 1034 aa9.38□□□□□ -0.91
VPS11-203ENST00000529545 BPTFQ12830 3046 aa9.38□□□□□ -0.91
VPS11-203ENST00000529545 SPTLC2O15270 562 aa9.37□□□□□ -0.91
VPS11-203ENST00000529545 IGHV4-34P06331 123 aa9.37□□□□□ -0.91
VPS11-203ENST00000529545 SYT1P21579 422 aa9.37□□□□□ -0.91
VPS11-203ENST00000529545 GLDCP23378 1020 aa9.37□□□□□ -0.91
VPS11-203ENST00000529545 HOXD9P28356 352 aaPredicted RBP9.37□□□□□ -0.91
VPS11-203ENST00000529545 ACADVLP49748 655 aa9.37□□□□□ -0.91
VPS11-203ENST00000529545 CLDN6P56747 220 aa9.37□□□□□ -0.91
VPS11-203ENST00000529545 DLG4P78352 724 aa9.37□□□□□ -0.91
VPS11-203ENST00000529545 EHHADHQ08426 723 aa9.37□□□□□ -0.91
VPS11-203ENST00000529545 CCDC173Q0VFZ6 552 aa9.37□□□□□ -0.91
VPS11-203ENST00000529545 TRIP4Q15650 581 aaPredicted RBP9.37□□□□□ -0.91
VPS11-203ENST00000529545 C8orf34Q49A92 452 aa9.37□□□□□ -0.91
VPS11-203ENST00000529545 ADGRF1Q5T601 910 aa9.37□□□□□ -0.91
VPS11-203ENST00000529545 PPP1R26Q5T8A7 1209 aaPredicted RBP9.37□□□□□ -0.91
VPS11-203ENST00000529545 BROXQ5VW32 411 aa9.37□□□□□ -0.91
VPS11-203ENST00000529545 CEP135Q66GS9 1140 aa9.37□□□□□ -0.91
VPS11-203ENST00000529545 FBXL19Q6PCT2 694 aa9.37□□□□□ -0.91
VPS11-203ENST00000529545 SLC9A9Q8IVB4 645 aa9.37□□□□□ -0.91
VPS11-203ENST00000529545 FMNL3Q8IVF7 1028 aa9.37□□□□□ -0.91
VPS11-203ENST00000529545 CCDC117Q8IWD4 279 aaPredicted RBP9.37□□□□□ -0.91
VPS11-203ENST00000529545 OXR1Q8N573 874 aa9.37□□□□□ -0.91
VPS11-203ENST00000529545 TTC39CQ8N584 583 aa9.37□□□□□ -0.91
VPS11-203ENST00000529545 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.37□□□□□ -0.91
VPS11-203ENST00000529545 SAP25Q8TEE9 199 aa9.37□□□□□ -0.91
VPS11-203ENST00000529545 HEXIM2Q96MH2 286 aaKnown RBP9.37□□□□□ -0.91
VPS11-203ENST00000529545 LGMNQ99538 433 aa9.37□□□□□ -0.91
VPS11-203ENST00000529545 OMDQ99983 421 aa9.37□□□□□ -0.91
VPS11-203ENST00000529545 BACH2Q9BYV9 841 aa9.37□□□□□ -0.91
VPS11-203ENST00000529545 UBXN6Q9BZV1 441 aa9.37□□□□□ -0.91
VPS11-203ENST00000529545 NIF3L1Q9GZT8 377 aa9.37□□□□□ -0.91
VPS11-203ENST00000529545 BLZF1Q9H2G9 400 aa9.37□□□□□ -0.91
VPS11-203ENST00000529545 PABPC3Q9H361 631 aaKnown RBP9.37□□□□□ -0.91
VPS11-203ENST00000529545 TPX2Q9ULW0 747 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms