RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 SHOC2Q9UQ13 582 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 CRYL1Q9Y2S2 319 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 RAD54BQ9Y620 910 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 SLIT1O75093 1534 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 SLCO1B7G3V0H7 640 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 PDE5AO76074 875 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 TOMM70O94826 608 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 ERVK-10P10266 1014 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 IL5RAQ01344 420 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 TBX2Q13207 712 aaPredicted RBP8.3□□□□□ -1.08
CTNND1-220ENST00000529526 PHKG1Q16816 387 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 C15orf59Q2T9L4 293 aaPredicted RBP8.3□□□□□ -1.08
CTNND1-220ENST00000529526 CCDC153Q494R4 210 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 APOBEC3HQ6NTF7 200 aaKnown RBP8.3□□□□□ -1.08
CTNND1-220ENST00000529526 DOK6Q6PKX4 331 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 FGD2Q7Z6J4 655 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 CYP4Z1Q86W10 505 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 FBXO39Q8N4B4 442 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 ARRDC4Q8NCT1 418 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 PRCCQ92733 491 aaPredicted RBP8.3□□□□□ -1.08
CTNND1-220ENST00000529526 DPY30Q9C005 99 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 GDF3Q9NR23 364 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 MAN1C1Q9NR34 630 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 A0A096LPK6 155 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 MAGEB16A2A368 324 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 NDUFB5O43674 189 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 SERPINF2P08697 491 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 ACADMP11310 421 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 CRADDP78560 199 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 FASTKQ14296 549 aaKnown RBP8.3□□□□□ -1.08
CTNND1-220ENST00000529526 KCNT2Q6UVM3 1135 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 ISLR2Q6UXK2 745 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 KYQ8NBH2 561 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 ZSCAN32Q9NX65 697 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 PCDHB12Q9Y5F1 795 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 PPP2R3BQ9Y5P8 575 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 FCHO1O14526 889 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 SERPINE1P05121 402 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 KLRC2P26717 231 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 SOX6P35712 828 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 ANXA11P50995 505 aaKnown RBP8.3□□□□□ -1.08
CTNND1-220ENST00000529526 KPNA1P52294 538 aaPredicted RBP8.3□□□□□ -1.08
CTNND1-220ENST00000529526 PLD1Q13393 1074 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 ACOX1Q15067 660 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 TRIM16LQ309B1 348 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 C16orf46Q6P387 395 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 DNAJC14Q6Y2X3 702 aaPredicted RBP8.3□□□□□ -1.08
CTNND1-220ENST00000529526 BRSK2Q8IWQ3 736 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 GDPD5Q8WTR4 605 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 PIK3R5Q8WYR1 880 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 MARK4Q96L34 752 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 CAMKK2Q96RR4 588 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 STN1Q9H668 368 aaKnown RBP8.3□□□□□ -1.08
CTNND1-220ENST00000529526 CDHR5Q9HBB8 845 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 PARVBQ9HBI1 364 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 COMMD8Q9NX08 183 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 ZNF112Q9UJU3 913 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 BANF1O75531 89 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 GP5P40197 560 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 IRX1P78414 480 aaPredicted RBP8.3□□□□□ -1.08
CTNND1-220ENST00000529526 GCNT1Q02742 428 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 CCDC92Q53HC0 331 aaPredicted RBP8.3□□□□□ -1.08
CTNND1-220ENST00000529526 OTUD3Q5T2D3 398 aaPredicted RBP8.3□□□□□ -1.08
CTNND1-220ENST00000529526 ANKS6Q68DC2 871 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 CYP2R1Q6VVX0 501 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 ITIH5Q86UX2 942 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 FAM83AQ86UY5 434 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 UTP15Q8TED0 518 aaKnown RBP8.3□□□□□ -1.08
CTNND1-220ENST00000529526 COPS5Q92905 334 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 FBXO44Q9H4M3 255 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 DCLRE1BQ9H816 532 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 CCDC154A6NI56 674 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 ACKR2O00590 384 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 TPP1O14773 563 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 SCAMP3O14828 347 aaKnown RBP8.3□□□□□ -1.08
CTNND1-220ENST00000529526 SEC22BO75396 215 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 RAG1P15918 1043 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 YWHAQP27348 245 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 RPA3P35244 121 aaPredicted RBP8.3□□□□□ -1.08
CTNND1-220ENST00000529526 PSEN2P49810 448 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 DGKZQ13574 1117 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 FAM228AQ86W67 206 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 TSEN2Q8NCE0 465 aaKnown RBP8.3□□□□□ -1.08
CTNND1-220ENST00000529526 CDCA5Q96FF9 252 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 SEMA6AQ9H2E6 1030 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 TSC22D4Q9Y3Q8 395 aa8.3□□□□□ -1.08
CTNND1-220ENST00000529526 BTN3A1O00481 513 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 FAM20BO75063 409 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 CBX6O95503 412 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 TGFB3P10600 412 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 HPGDP15428 266 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 CYP2A7P20853 494 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 CLK2P49760 499 aaKnown RBP8.29□□□□□ -1.08
CTNND1-220ENST00000529526 PPP3CAQ08209 521 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 ACVR2BQ13705 512 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 DPYSL3Q14195 570 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 GRIK5Q16478 980 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 ZDHHC17Q8IUH5 632 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 MAP4K3Q8IVH8 894 aa8.29□□□□□ -1.08
CTNND1-220ENST00000529526 SYTL1Q8IYJ3 562 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms