RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 Q6ZS52 159 aa12.02□□□□□ -0.49
CCDC90B-210ENST00000528149 H2AFVQ71UI9 128 aa12.02□□□□□ -0.49
CCDC90B-210ENST00000528149 TAC4Q86UU9 113 aa12.02□□□□□ -0.49
CCDC90B-210ENST00000528149 C12orf40Q86WS4 652 aa12.02□□□□□ -0.49
CCDC90B-210ENST00000528149 CCDC112Q8NEF3 446 aa12.02□□□□□ -0.49
CCDC90B-210ENST00000528149 FAM3CQ92520 227 aa12.02□□□□□ -0.49
CCDC90B-210ENST00000528149 TCEAL3Q969E4 200 aa12.02□□□□□ -0.49
CCDC90B-210ENST00000528149 VCPIP1Q96JH7 1222 aa12.02□□□□□ -0.49
CCDC90B-210ENST00000528149 CDK5RAP1Q96SZ6 601 aaKnown RBP12.02□□□□□ -0.49
CCDC90B-210ENST00000528149 TRIM62Q9BVG3 475 aa12.02□□□□□ -0.49
CCDC90B-210ENST00000528149 TRIM7Q9C029 511 aa12.02□□□□□ -0.49
CCDC90B-210ENST00000528149 FAM204AQ9H8W3 233 aa12.02□□□□□ -0.49
CCDC90B-210ENST00000528149 OLA1Q9NTK5 396 aaKnown RBP12.02□□□□□ -0.49
CCDC90B-210ENST00000528149 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.02□□□□□ -0.49
CCDC90B-210ENST00000528149 COX16Q9P0S2 106 aa12.02□□□□□ -0.49
CCDC90B-210ENST00000528149 SFMBT1Q9UHJ3 866 aa12.02□□□□□ -0.49
CCDC90B-210ENST00000528149 DNMT3LQ9UJW3 386 aa12.02□□□□□ -0.49
CCDC90B-210ENST00000528149 TMEM59LQ9UK28 342 aa12.02□□□□□ -0.49
CCDC90B-210ENST00000528149 TFR2Q9UP52 801 aa12.02□□□□□ -0.49
CCDC90B-210ENST00000528149 REXO2Q9Y3B8 237 aaKnown RBP12.02□□□□□ -0.49
CCDC90B-210ENST00000528149 EPN1Q9Y6I3 576 aaPredicted RBP12.02□□□□□ -0.49
CCDC90B-210ENST00000528149 PIAS3Q9Y6X2 628 aa12.02□□□□□ -0.49
CCDC90B-210ENST00000528149 KIAA1549LQ6ZVL6 1849 aa12.02□□□□□ -0.49
CCDC90B-210ENST00000528149 SLC12A8A0AV02 714 aa12.01□□□□□ -0.49
CCDC90B-210ENST00000528149 ANKRD62A6NC57 917 aa12.01□□□□□ -0.49
CCDC90B-210ENST00000528149 SIGLEC16A6NMB1 481 aa12.01□□□□□ -0.49
CCDC90B-210ENST00000528149 EIF3CLB5ME19 914 aaKnown RBP12.01□□□□□ -0.49
CCDC90B-210ENST00000528149 DPYSL4O14531 572 aa12.01□□□□□ -0.49
CCDC90B-210ENST00000528149 GREM1O60565 184 aa12.01□□□□□ -0.49
CCDC90B-210ENST00000528149 PAPSS2O95340 614 aaPredicted RBP12.01□□□□□ -0.49
CCDC90B-210ENST00000528149 LCA5LO95447 670 aa12.01□□□□□ -0.49
CCDC90B-210ENST00000528149 CYP1A2P05177 515 aa12.01□□□□□ -0.49
CCDC90B-210ENST00000528149 KRT3P12035 628 aa12.01□□□□□ -0.49
CCDC90B-210ENST00000528149 PFKLP17858 780 aa12.01□□□□□ -0.49
CCDC90B-210ENST00000528149 ATP5C1P36542 298 aaKnown RBP12.01□□□□□ -0.49
CCDC90B-210ENST00000528149 SULT1E1P49888 294 aa12.01□□□□□ -0.49
CCDC90B-210ENST00000528149 SLC7A9P82251 487 aa12.01□□□□□ -0.49
CCDC90B-210ENST00000528149 MAMLD1Q13495 774 aa12.01□□□□□ -0.49
CCDC90B-210ENST00000528149 SPA17Q15506 151 aa12.01□□□□□ -0.49
CCDC90B-210ENST00000528149 PLA2G2CQ5R387 149 aa12.01□□□□□ -0.49
CCDC90B-210ENST00000528149 PPP1R15BQ5SWA1 713 aa12.01□□□□□ -0.49
CCDC90B-210ENST00000528149 TADA2BQ86TJ2 420 aa12.01□□□□□ -0.49
CCDC90B-210ENST00000528149 YAF2Q8IY57 180 aa12.01□□□□□ -0.49
CCDC90B-210ENST00000528149 SPEM1Q8N4L4 309 aa12.01□□□□□ -0.49
CCDC90B-210ENST00000528149 DEPDC1BQ8WUY9 529 aa12.01□□□□□ -0.49
CCDC90B-210ENST00000528149 RXFP2Q8WXD0 754 aa12.01□□□□□ -0.49
CCDC90B-210ENST00000528149 CTNNBL1Q8WYA6 563 aaPredicted RBP12.01□□□□□ -0.49
CCDC90B-210ENST00000528149 CFAP57Q96MR6 1250 aa12.01□□□□□ -0.49
CCDC90B-210ENST00000528149 TBCBQ99426 244 aa12.01□□□□□ -0.49
CCDC90B-210ENST00000528149 EIF3CQ99613 913 aaKnown RBP12.01□□□□□ -0.49
CCDC90B-210ENST00000528149 FAM83CQ9BQN1 747 aa12.01□□□□□ -0.49
CCDC90B-210ENST00000528149 NUP85Q9BW27 656 aa12.01□□□□□ -0.49
CCDC90B-210ENST00000528149 KCNF1Q9H3M0 494 aa12.01□□□□□ -0.49
CCDC90B-210ENST00000528149 ZDHHC4Q9NPG8 344 aa12.01□□□□□ -0.49
CCDC90B-210ENST00000528149 ZMYM5Q9UJ78 669 aa12.01□□□□□ -0.49
CCDC90B-210ENST00000528149 ARHGAP26Q9UNA1 814 aa12.01□□□□□ -0.49
CCDC90B-210ENST00000528149 CACNA1EQ15878 2313 aa12.01□□□□□ -0.49
CCDC90B-210ENST00000528149 C2CD4BA6NLJ0 364 aa12□□□□□ -0.49
CCDC90B-210ENST00000528149 CYSRT1A8MQ03 144 aa12□□□□□ -0.49
CCDC90B-210ENST00000528149 SPECC1L-ADORA2AF8WAN1 911 aa12□□□□□ -0.49
CCDC90B-210ENST00000528149 TRIM24O15164 1050 aa12□□□□□ -0.49
CCDC90B-210ENST00000528149 CHADO15335 359 aa12□□□□□ -0.49
CCDC90B-210ENST00000528149 IRAK2O43187 625 aa12□□□□□ -0.49
CCDC90B-210ENST00000528149 IPO7O95373 1038 aaKnown RBP12□□□□□ -0.49
CCDC90B-210ENST00000528149 TRUB2O95900 331 aaKnown RBP12□□□□□ -0.49
CCDC90B-210ENST00000528149 CYP17A1P05093 508 aa12□□□□□ -0.49
CCDC90B-210ENST00000528149 TMEM253P0C7T8 217 aa12□□□□□ -0.49
CCDC90B-210ENST00000528149 GPD1P21695 349 aa12□□□□□ -0.49
CCDC90B-210ENST00000528149 WEE1P30291 646 aa12□□□□□ -0.49
CCDC90B-210ENST00000528149 CTHP32929 405 aa12□□□□□ -0.49
CCDC90B-210ENST00000528149 NOS2P35228 1153 aa12□□□□□ -0.49
CCDC90B-210ENST00000528149 RFC1P35251 1148 aaPredicted RBP12□□□□□ -0.49
CCDC90B-210ENST00000528149 MATKP42679 507 aa12□□□□□ -0.49
CCDC90B-210ENST00000528149 MAGEA1P43355 309 aa12□□□□□ -0.49
CCDC90B-210ENST00000528149 ATP11AP98196 1134 aa12□□□□□ -0.49
CCDC90B-210ENST00000528149 OGDHQ02218 1023 aa12□□□□□ -0.49
CCDC90B-210ENST00000528149 PON2Q15165 354 aa12□□□□□ -0.49
CCDC90B-210ENST00000528149 CDO1Q16878 200 aa12□□□□□ -0.49
CCDC90B-210ENST00000528149 C15orf59Q2T9L4 293 aaPredicted RBP12□□□□□ -0.49
CCDC90B-210ENST00000528149 EML3Q32P44 896 aa12□□□□□ -0.49
CCDC90B-210ENST00000528149 RAB6CQ53S08 254 aa12□□□□□ -0.49
CCDC90B-210ENST00000528149 SH3PXD2AQ5TCZ1 1133 aa12□□□□□ -0.49
CCDC90B-210ENST00000528149 KIAA1211LQ6NV74 962 aa12□□□□□ -0.49
CCDC90B-210ENST00000528149 DCUN1D2Q6PH85 259 aa12□□□□□ -0.49
CCDC90B-210ENST00000528149 KLHDC10Q6PID8 442 aa12□□□□□ -0.49
CCDC90B-210ENST00000528149 BEND5Q7L4P6 421 aa12□□□□□ -0.49
CCDC90B-210ENST00000528149 PDZD3Q86UT5 571 aa12□□□□□ -0.49
CCDC90B-210ENST00000528149 BBS7Q8IWZ6 715 aa12□□□□□ -0.49
CCDC90B-210ENST00000528149 ZNF276Q8N554 614 aa12□□□□□ -0.49
CCDC90B-210ENST00000528149 LOXL4Q96JB6 756 aa12□□□□□ -0.49
CCDC90B-210ENST00000528149 BTBD6Q96KE9 485 aa12□□□□□ -0.49
CCDC90B-210ENST00000528149 ZNF830Q96NB3 372 aaPredicted RBP12□□□□□ -0.49
CCDC90B-210ENST00000528149 EDEM2Q9BV94 578 aa12□□□□□ -0.49
CCDC90B-210ENST00000528149 KLF16Q9BXK1 252 aaPredicted RBP12□□□□□ -0.49
CCDC90B-210ENST00000528149 RAB6CQ9H0N0 254 aa12□□□□□ -0.49
CCDC90B-210ENST00000528149 KIF9Q9HAQ2 790 aa12□□□□□ -0.49
CCDC90B-210ENST00000528149 PARVAQ9NVD7 372 aa12□□□□□ -0.49
CCDC90B-210ENST00000528149 DDIT4Q9NX09 232 aa12□□□□□ -0.49
CCDC90B-210ENST00000528149 CALCOCO1Q9P1Z2 691 aa12□□□□□ -0.49
CCDC90B-210ENST00000528149 STAP1Q9ULZ2 295 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms