RNA–Protein interactions for RNA: ENST00000527805.5

ATM-212, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 4,841 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-212ENST00000527805 FAM47DPA6NHR8 397 aa15.22■□□□□ 0.03
ATM-212ENST00000527805 USP12O75317 370 aa15.22■□□□□ 0.03
ATM-212ENST00000527805 LRCH4O75427 683 aa15.22■□□□□ 0.03
ATM-212ENST00000527805 HIST1H2AGP0C0S8 130 aaPredicted RBP15.22■□□□□ 0.03
ATM-212ENST00000527805 HIST1H2ADP20671 130 aa15.22■□□□□ 0.03
ATM-212ENST00000527805 TAF5Q15542 800 aa15.22■□□□□ 0.03
ATM-212ENST00000527805 HS6ST3Q8IZP7 471 aa15.22■□□□□ 0.03
ATM-212ENST00000527805 RIBC1Q8N443 379 aaPredicted RBP15.22■□□□□ 0.03
ATM-212ENST00000527805 HIST1H2AHQ96KK5 128 aa15.22■□□□□ 0.03
ATM-212ENST00000527805 FIZ1Q96SL8 496 aa15.22■□□□□ 0.03
ATM-212ENST00000527805 HIST1H2AJQ99878 128 aa15.22■□□□□ 0.03
ATM-212ENST00000527805 H2AFJQ9BTM1 129 aa15.22■□□□□ 0.03
ATM-212ENST00000527805 C2orf49Q9BVC5 232 aaPredicted RBP15.22■□□□□ 0.03
ATM-212ENST00000527805 OXCT2Q9BYC2 517 aaPredicted RBP15.22■□□□□ 0.03
ATM-212ENST00000527805 CAPN7Q9Y6W3 813 aa15.22■□□□□ 0.03
ATM-212ENST00000527805 SYNCRIPO60506 623 aaKnown RBP15.22■□□□□ 0.03
ATM-212ENST00000527805 RHOBTB1O94844 696 aa15.22■□□□□ 0.03
ATM-212ENST00000527805 MMP13P45452 471 aa15.22■□□□□ 0.03
ATM-212ENST00000527805 DPYSL3Q14195 570 aa15.22■□□□□ 0.03
ATM-212ENST00000527805 MAP7Q14244 749 aa15.22■□□□□ 0.03
ATM-212ENST00000527805 BRMS1LQ5PSV4 323 aa15.22■□□□□ 0.03
ATM-212ENST00000527805 ARHGAP17Q68EM7 881 aa15.22■□□□□ 0.03
ATM-212ENST00000527805 FBXO46Q6PJ61 603 aaPredicted RBP15.22■□□□□ 0.03
ATM-212ENST00000527805 CRTAMO95727 393 aa15.22■□□□□ 0.03
ATM-212ENST00000527805 TTC4O95801 387 aa15.22■□□□□ 0.03
ATM-212ENST00000527805 CDC25CP30307 473 aa15.22■□□□□ 0.03
ATM-212ENST00000527805 ELK3P41970 407 aa15.22■□□□□ 0.03
ATM-212ENST00000527805 AGBL2Q5U5Z8 902 aa15.22■□□□□ 0.03
ATM-212ENST00000527805 CFAP61Q8NHU2 1237 aa15.22■□□□□ 0.03
ATM-212ENST00000527805 PCDH18Q9HCL0 1135 aa15.22■□□□□ 0.03
ATM-212ENST00000527805 SALL4Q9UJQ4 1053 aa15.22■□□□□ 0.03
ATM-212ENST00000527805 PAPSS1O43252 624 aaPredicted RBP15.22■□□□□ 0.03
ATM-212ENST00000527805 DIAPH2O60879 1101 aa15.22■□□□□ 0.03
ATM-212ENST00000527805 SYF2O95926 243 aaKnown RBP15.22■□□□□ 0.03
ATM-212ENST00000527805 ETS1P14921 441 aa15.22■□□□□ 0.03
ATM-212ENST00000527805 HABP4Q5JVS0 413 aaKnown RBP15.22■□□□□ 0.03
ATM-212ENST00000527805 NETO2Q8NC67 525 aa15.22■□□□□ 0.03
ATM-212ENST00000527805 GIMAP7Q8NHV1 300 aa15.22■□□□□ 0.03
ATM-212ENST00000527805 EPS8L3Q8TE67 593 aaKnown RBP15.22■□□□□ 0.03
ATM-212ENST00000527805 FNIP1Q8TF40 1166 aa15.22■□□□□ 0.03
ATM-212ENST00000527805 RAB3IPQ96QF0 476 aaPredicted RBP15.22■□□□□ 0.03
ATM-212ENST00000527805 MPP6Q9NZW5 540 aa15.22■□□□□ 0.03
ATM-212ENST00000527805 TMEM120BA0PK00 339 aa15.21■□□□□ 0.03
ATM-212ENST00000527805 LIASO43766 372 aa15.21■□□□□ 0.03
ATM-212ENST00000527805 PAGE1O75459 146 aa15.21■□□□□ 0.03
ATM-212ENST00000527805 COL6A1P12109 1028 aa15.21■□□□□ 0.03
ATM-212ENST00000527805 TPD52P55327 224 aaPredicted RBP15.21■□□□□ 0.03
ATM-212ENST00000527805 DQX1Q8TE96 717 aaKnown RBP15.21■□□□□ 0.03
ATM-212ENST00000527805 SERPINB12Q96P63 405 aa15.21■□□□□ 0.03
ATM-212ENST00000527805 DRC3Q9H069 523 aa15.21■□□□□ 0.03
ATM-212ENST00000527805 IARS2Q9NSE4 1012 aaKnown RBP15.21■□□□□ 0.03
ATM-212ENST00000527805 SIX4Q9UIU6 781 aa15.21■□□□□ 0.03
ATM-212ENST00000527805 FSCN2O14926 492 aa15.21■□□□□ 0.03
ATM-212ENST00000527805 EDIL3O43854 480 aa15.21■□□□□ 0.03
ATM-212ENST00000527805 CHN1P15882 459 aa15.21■□□□□ 0.03
ATM-212ENST00000527805 RGS4P49798 205 aa15.21■□□□□ 0.03
ATM-212ENST00000527805 LRRN4Q8WUT4 740 aa15.21■□□□□ 0.03
ATM-212ENST00000527805 CHMP6Q96FZ7 201 aa15.21■□□□□ 0.03
ATM-212ENST00000527805 HHIPL1Q96JK4 782 aa15.21■□□□□ 0.03
ATM-212ENST00000527805 TCF25Q9BQ70 676 aa15.21■□□□□ 0.03
ATM-212ENST00000527805 FAM153AQ9UHL3 310 aa15.21■□□□□ 0.03
ATM-212ENST00000527805 SHANK3Q9BYB0 1731 aa15.21■□□□□ 0.03
ATM-212ENST00000527805 ZNF197O14709 1029 aa15.21■□□□□ 0.03
ATM-212ENST00000527805 SOAT2O75908 522 aa15.21■□□□□ 0.03
ATM-212ENST00000527805 GPD2P43304 727 aa15.21■□□□□ 0.03
ATM-212ENST00000527805 TSSK1BQ9BXA7 367 aa15.21■□□□□ 0.03
ATM-212ENST00000527805 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.21■□□□□ 0.03
ATM-212ENST00000527805 DRG1Q9Y295 367 aaKnown RBP15.21■□□□□ 0.03
ATM-212ENST00000527805 VPS9D1Q9Y2B5 631 aa15.21■□□□□ 0.03
ATM-212ENST00000527805 TBL1XO60907 577 aa15.2■□□□□ 0.02
ATM-212ENST00000527805 SP100P23497 879 aaPredicted RBP15.2■□□□□ 0.02
ATM-212ENST00000527805 MAP4P27816 1152 aaKnown RBP15.2■□□□□ 0.02
ATM-212ENST00000527805 CSE1LP55060 971 aaKnown RBP15.2■□□□□ 0.02
ATM-212ENST00000527805 KIF19Q2TAC6 998 aa15.2■□□□□ 0.02
ATM-212ENST00000527805 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.2■□□□□ 0.02
ATM-212ENST00000527805 SUSD3Q96L08 255 aa15.2■□□□□ 0.02
ATM-212ENST00000527805 LGMNQ99538 433 aa15.2■□□□□ 0.02
ATM-212ENST00000527805 UBE2OQ9C0C9 1292 aaKnown RBP15.2■□□□□ 0.02
ATM-212ENST00000527805 PTPRJQ12913 1337 aa15.2■□□□□ 0.02
ATM-212ENST00000527805 GPR32O75388 356 aa15.2■□□□□ 0.02
ATM-212ENST00000527805 LIG3P49916 1009 aa15.2■□□□□ 0.02
ATM-212ENST00000527805 ACAD11Q709F0 780 aa15.2■□□□□ 0.02
ATM-212ENST00000527805 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.2■□□□□ 0.02
ATM-212ENST00000527805 KLHL29Q96CT2 875 aa15.2■□□□□ 0.02
ATM-212ENST00000527805 FOPNLQ96NB1 174 aa15.2■□□□□ 0.02
ATM-212ENST00000527805 POLR1EQ9GZS1 481 aaKnown RBP15.2■□□□□ 0.02
ATM-212ENST00000527805 CACYBPQ9HB71 228 aaKnown RBP15.2■□□□□ 0.02
ATM-212ENST00000527805 INSL6Q9Y581 213 aa15.2■□□□□ 0.02
ATM-212ENST00000527805 A0A0A0MRY4 1105 aa15.2■□□□□ 0.02
ATM-212ENST00000527805 TBC1D3BA6NDS4 549 aa15.2■□□□□ 0.02
ATM-212ENST00000527805 CCL16O15467 120 aa15.2■□□□□ 0.02
ATM-212ENST00000527805 ESRRAP11474 423 aaPredicted RBP15.2■□□□□ 0.02
ATM-212ENST00000527805 UNGP13051 313 aaPredicted RBP15.2■□□□□ 0.02
ATM-212ENST00000527805 ANKRD20A2Q5SQ80 823 aa15.2■□□□□ 0.02
ATM-212ENST00000527805 ANKRD20A1Q5TYW2 823 aa15.2■□□□□ 0.02
ATM-212ENST00000527805 SGSM3Q96HU1 749 aa15.2■□□□□ 0.02
ATM-212ENST00000527805 SPATA13Q96N96 652 aa15.2■□□□□ 0.02
ATM-212ENST00000527805 PRMT1Q99873 361 aaKnown RBP15.2■□□□□ 0.02
ATM-212ENST00000527805 FUT8Q9BYC5 575 aa15.2■□□□□ 0.02
ATM-212ENST00000527805 PDLIM7Q9NR12 457 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms