RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 CLCN5P51795 746 aa3.14□□□□□ -1.91
ECHDC1-219ENST00000526299 Q0VFX4 171 aa3.14□□□□□ -1.91
ECHDC1-219ENST00000526299 PIN1Q13526 163 aaPredicted RBP3.14□□□□□ -1.91
ECHDC1-219ENST00000526299 TMEM196Q5HYL7 178 aa3.14□□□□□ -1.91
ECHDC1-219ENST00000526299 FAM90A2PQ658T7 463 aa3.14□□□□□ -1.91
ECHDC1-219ENST00000526299 ACSM6Q6P461 480 aa3.14□□□□□ -1.91
ECHDC1-219ENST00000526299 ZNF474Q6S9Z5 364 aaPredicted RBP3.14□□□□□ -1.91
ECHDC1-219ENST00000526299 LRIG3Q6UXM1 1119 aa3.14□□□□□ -1.91
ECHDC1-219ENST00000526299 RNF44Q7L0R7 432 aa3.14□□□□□ -1.91
ECHDC1-219ENST00000526299 ARMC9Q7Z3E5 817 aa3.14□□□□□ -1.91
ECHDC1-219ENST00000526299 LAS2Q8IYD9 372 aa3.14□□□□□ -1.91
ECHDC1-219ENST00000526299 CLEC18CQ8NCF0 446 aa3.14□□□□□ -1.91
ECHDC1-219ENST00000526299 OR52L2PQ8NGH6 319 aa3.14□□□□□ -1.91
ECHDC1-219ENST00000526299 ZFPM2Q8WW38 1151 aa3.14□□□□□ -1.91
ECHDC1-219ENST00000526299 ASB12Q8WXK4 309 aa3.14□□□□□ -1.91
ECHDC1-219ENST00000526299 SNX22Q96L94 193 aa3.14□□□□□ -1.91
ECHDC1-219ENST00000526299 INPP4AQ96PE3 977 aaPredicted RBP3.14□□□□□ -1.91
ECHDC1-219ENST00000526299 ABHD14AQ9BUJ0 271 aa3.14□□□□□ -1.91
ECHDC1-219ENST00000526299 LRRC27Q9C0I9 530 aa3.14□□□□□ -1.91
ECHDC1-219ENST00000526299 MAP6D1Q9H9H5 199 aa3.14□□□□□ -1.91
ECHDC1-219ENST00000526299 ERVK-5Q9HDB9 667 aa3.14□□□□□ -1.91
ECHDC1-219ENST00000526299 SPAG4Q9NPE6 437 aa3.14□□□□□ -1.91
ECHDC1-219ENST00000526299 TBC1D14Q9P2M4 693 aa3.14□□□□□ -1.91
ECHDC1-219ENST00000526299 RGS17Q9UGC6 210 aaPredicted RBP3.14□□□□□ -1.91
ECHDC1-219ENST00000526299 A0A0B4J293 547 aa3.13□□□□□ -1.91
ECHDC1-219ENST00000526299 E2F8A0AVK6 867 aa3.13□□□□□ -1.91
ECHDC1-219ENST00000526299 SRRM3A6NNA2 597 aaPredicted RBP3.13□□□□□ -1.91
ECHDC1-219ENST00000526299 SPRY3O43610 288 aa3.13□□□□□ -1.91
ECHDC1-219ENST00000526299 CCNT2O60583 730 aaKnown RBP3.13□□□□□ -1.91
ECHDC1-219ENST00000526299 IL18RAPO95256 599 aa3.13□□□□□ -1.91
ECHDC1-219ENST00000526299 KLKB1P03952 638 aa3.13□□□□□ -1.91
ECHDC1-219ENST00000526299 RFPL3SP0C7P2 107 aa3.13□□□□□ -1.91
ECHDC1-219ENST00000526299 MYF5P13349 255 aa3.13□□□□□ -1.91
ECHDC1-219ENST00000526299 ALADP13716 330 aa3.13□□□□□ -1.91
ECHDC1-219ENST00000526299 ABATP80404 500 aa3.13□□□□□ -1.91
ECHDC1-219ENST00000526299 EEF1A2Q05639 463 aaKnown RBP3.13□□□□□ -1.91
ECHDC1-219ENST00000526299 COASYQ13057 564 aa3.13□□□□□ -1.91
ECHDC1-219ENST00000526299 TRAF1Q13077 416 aa3.13□□□□□ -1.91
ECHDC1-219ENST00000526299 GPS2Q13227 327 aa3.13□□□□□ -1.91
ECHDC1-219ENST00000526299 GPR18Q14330 331 aa3.13□□□□□ -1.91
ECHDC1-219ENST00000526299 TTF1Q15361 905 aaPredicted RBP3.13□□□□□ -1.91
ECHDC1-219ENST00000526299 TTC39AQ5SRH9 613 aa3.13□□□□□ -1.91
ECHDC1-219ENST00000526299 FNBP1LQ5T0N5 605 aa3.13□□□□□ -1.91
ECHDC1-219ENST00000526299 RNF220Q5VTB9 566 aa3.13□□□□□ -1.91
ECHDC1-219ENST00000526299 RRAGBQ5VZM2 374 aa3.13□□□□□ -1.91
ECHDC1-219ENST00000526299 CYB5R4Q7L1T6 521 aa3.13□□□□□ -1.91
ECHDC1-219ENST00000526299 C16orf82Q7Z2V1 217 aa3.13□□□□□ -1.91
ECHDC1-219ENST00000526299 ZCRB1Q8TBF4 217 aaKnown RBP3.13□□□□□ -1.91
ECHDC1-219ENST00000526299 PMM1Q92871 262 aa3.13□□□□□ -1.91
ECHDC1-219ENST00000526299 APIPQ96GX9 242 aa3.13□□□□□ -1.91
ECHDC1-219ENST00000526299 CLMNQ96JQ2 1002 aa3.13□□□□□ -1.91
ECHDC1-219ENST00000526299 RTFDC1Q9BY42 306 aaPredicted RBP3.13□□□□□ -1.91
ECHDC1-219ENST00000526299 RETREG1Q9H6L5 497 aa3.13□□□□□ -1.91
ECHDC1-219ENST00000526299 PRDM16Q9HAZ2 1276 aa3.13□□□□□ -1.91
ECHDC1-219ENST00000526299 KRCC1Q9NPI7 259 aaPredicted RBP3.13□□□□□ -1.91
ECHDC1-219ENST00000526299 MAGED2Q9UNF1 606 aaPredicted RBP3.13□□□□□ -1.91
ECHDC1-219ENST00000526299 B3GNT3Q9Y2A9 372 aa3.13□□□□□ -1.91
ECHDC1-219ENST00000526299 CKAP5Q14008 2032 aa3.13□□□□□ -1.91
ECHDC1-219ENST00000526299 FOXO6A8MYZ6 492 aa3.12□□□□□ -1.91
ECHDC1-219ENST00000526299 ZSCAN9O15535 394 aaPredicted RBP3.12□□□□□ -1.91
ECHDC1-219ENST00000526299 CBFA2T3O75081 653 aa3.12□□□□□ -1.91
ECHDC1-219ENST00000526299 COQ9O75208 318 aa3.12□□□□□ -1.91
ECHDC1-219ENST00000526299 GLUD1P00367 558 aa3.12□□□□□ -1.91
ECHDC1-219ENST00000526299 ARSBP15848 533 aa3.12□□□□□ -1.91
ECHDC1-219ENST00000526299 GSTM5P46439 218 aa3.12□□□□□ -1.91
ECHDC1-219ENST00000526299 RFX5P48382 616 aaPredicted RBP3.12□□□□□ -1.91
ECHDC1-219ENST00000526299 GLUD2P49448 558 aa3.12□□□□□ -1.91
ECHDC1-219ENST00000526299 MCL1Q07820 350 aa3.12□□□□□ -1.91
ECHDC1-219ENST00000526299 DSC1Q08554 894 aa3.12□□□□□ -1.91
ECHDC1-219ENST00000526299 SF3B4Q15427 424 aaKnown RBP eCLIP3.12□□□□□ -1.91
ECHDC1-219ENST00000526299 ZNF718Q3SXZ3 478 aa3.12□□□□□ -1.91
ECHDC1-219ENST00000526299 KIAA1755Q5JYT7 1200 aa3.12□□□□□ -1.91
ECHDC1-219ENST00000526299 OTUD1Q5VV17 481 aaPredicted RBP3.12□□□□□ -1.91
ECHDC1-219ENST00000526299 C9orf57Q5W0N0 161 aa3.12□□□□□ -1.91
ECHDC1-219ENST00000526299 CCDC144NLQ6NUI1 221 aa3.12□□□□□ -1.91
ECHDC1-219ENST00000526299 KRT28Q7Z3Y7 464 aa3.12□□□□□ -1.91
ECHDC1-219ENST00000526299 LRTOMTQ8WZ04 291 aa3.12□□□□□ -1.91
ECHDC1-219ENST00000526299 OVCA2Q8WZ82 227 aa3.12□□□□□ -1.91
ECHDC1-219ENST00000526299 ZNF347Q96SE7 839 aa3.12□□□□□ -1.91
ECHDC1-219ENST00000526299 EIF3CQ99613 913 aaKnown RBP3.12□□□□□ -1.91
ECHDC1-219ENST00000526299 C1QTNF4Q9BXJ3 329 aa3.12□□□□□ -1.91
ECHDC1-219ENST00000526299 MAGEH1Q9H213 219 aa3.12□□□□□ -1.91
ECHDC1-219ENST00000526299 TMOD4Q9NZQ9 345 aa3.12□□□□□ -1.91
ECHDC1-219ENST00000526299 GAGE12JA6NER3 117 aa3.11□□□□□ -1.91
ECHDC1-219ENST00000526299 LCATP04180 440 aa3.11□□□□□ -1.91
ECHDC1-219ENST00000526299 CXCR3P49682 368 aa3.11□□□□□ -1.91
ECHDC1-219ENST00000526299 RASSF2P50749 326 aa3.11□□□□□ -1.91
ECHDC1-219ENST00000526299 CACNB3P54284 484 aa3.11□□□□□ -1.91
ECHDC1-219ENST00000526299 GPS1Q13098 491 aa3.11□□□□□ -1.91
ECHDC1-219ENST00000526299 P3H1Q32P28 736 aa3.11□□□□□ -1.91
ECHDC1-219ENST00000526299 ABLIM2Q6H8Q1 611 aa3.11□□□□□ -1.91
ECHDC1-219ENST00000526299 CADM3Q8N126 398 aa3.11□□□□□ -1.91
ECHDC1-219ENST00000526299 GABPB2Q8TAK5 448 aaPredicted RBP3.11□□□□□ -1.91
ECHDC1-219ENST00000526299 GLMPQ8WWB7 406 aa3.11□□□□□ -1.91
ECHDC1-219ENST00000526299 ADAMTS14Q8WXS8 1223 aa3.11□□□□□ -1.91
ECHDC1-219ENST00000526299 KAT2AQ92830 837 aa3.11□□□□□ -1.91
ECHDC1-219ENST00000526299 RUNDC1Q96C34 613 aa3.11□□□□□ -1.91
ECHDC1-219ENST00000526299 WDR24Q96S15 920 aa3.11□□□□□ -1.91
ECHDC1-219ENST00000526299 ZBTB26Q9HCK0 441 aa3.11□□□□□ -1.91
ECHDC1-219ENST00000526299 HEYLQ9NQ87 328 aaPredicted RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms