RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 CPXCR1Q8N123 301 aa3.54□□□□□ -1.84
CSDE1-209ENST00000525132 MSL3Q8N5Y2 521 aaKnown RBP3.54□□□□□ -1.84
CSDE1-209ENST00000525132 ACRBPQ8NEB7 543 aa3.54□□□□□ -1.84
CSDE1-209ENST00000525132 PPP1R14CQ8TAE6 165 aa3.54□□□□□ -1.84
CSDE1-209ENST00000525132 SLC22A17Q8WUG5 538 aa3.54□□□□□ -1.84
CSDE1-209ENST00000525132 GJA10Q969M2 543 aa3.54□□□□□ -1.84
CSDE1-209ENST00000525132 C18orf12Q96KH6 178 aa3.54□□□□□ -1.84
CSDE1-209ENST00000525132 C5orf34Q96MH7 638 aa3.54□□□□□ -1.84
CSDE1-209ENST00000525132 NUP88Q99567 741 aaPredicted RBP3.54□□□□□ -1.84
CSDE1-209ENST00000525132 KXD1Q9BQD3 176 aa3.54□□□□□ -1.84
CSDE1-209ENST00000525132 MTG1Q9BT17 334 aaPredicted RBP3.54□□□□□ -1.84
CSDE1-209ENST00000525132 NAA15Q9BXJ9 866 aaKnown RBP3.54□□□□□ -1.84
CSDE1-209ENST00000525132 OSBPL5Q9H0X9 879 aaPredicted RBP3.54□□□□□ -1.84
CSDE1-209ENST00000525132 ZCCHC4Q9H5U6 513 aa3.54□□□□□ -1.84
CSDE1-209ENST00000525132 NLRC4Q9NPP4 1024 aa3.54□□□□□ -1.84
CSDE1-209ENST00000525132 KLHL11Q9NVR0 708 aa3.54□□□□□ -1.84
CSDE1-209ENST00000525132 LUZP4Q9P127 313 aa3.54□□□□□ -1.84
CSDE1-209ENST00000525132 CROTQ9UKG9 612 aa3.54□□□□□ -1.84
CSDE1-209ENST00000525132 CNOT11Q9UKZ1 510 aaKnown RBP3.54□□□□□ -1.84
CSDE1-209ENST00000525132 TMPRSS11EQ9UL52 423 aa3.54□□□□□ -1.84
CSDE1-209ENST00000525132 FPGT-TNNI3KV9GXZ4 949 aa3.54□□□□□ -1.84
CSDE1-209ENST00000525132 ESPL1Q14674 2120 aa3.53□□□□□ -1.84
CSDE1-209ENST00000525132 EMSYQ7Z589 1322 aa3.53□□□□□ -1.84
CSDE1-209ENST00000525132 ELL2O00472 640 aaPredicted RBP3.53□□□□□ -1.84
CSDE1-209ENST00000525132 MAFGO15525 162 aa3.53□□□□□ -1.84
CSDE1-209ENST00000525132 PIP5K1CO60331 668 aa3.53□□□□□ -1.84
CSDE1-209ENST00000525132 HIP1RO75146 1068 aa3.53□□□□□ -1.84
CSDE1-209ENST00000525132 RTN2O75298 545 aa3.53□□□□□ -1.84
CSDE1-209ENST00000525132 REC8O95072 547 aa3.53□□□□□ -1.84
CSDE1-209ENST00000525132 PLATP00750 562 aa3.53□□□□□ -1.84
CSDE1-209ENST00000525132 ZNF888P0CJ79 500 aaPredicted RBP3.53□□□□□ -1.84
CSDE1-209ENST00000525132 SLC9A1P19634 815 aa3.53□□□□□ -1.84
CSDE1-209ENST00000525132 CA8P35219 290 aa3.53□□□□□ -1.84
CSDE1-209ENST00000525132 KCNJ4P48050 445 aa3.53□□□□□ -1.84
CSDE1-209ENST00000525132 RGS3P49796 1198 aa3.53□□□□□ -1.84
CSDE1-209ENST00000525132 AK2P54819 239 aa3.53□□□□□ -1.84
CSDE1-209ENST00000525132 HGFACQ04756 655 aa3.53□□□□□ -1.84
CSDE1-209ENST00000525132 RNASELQ05823 741 aaKnown RBP3.53□□□□□ -1.84
CSDE1-209ENST00000525132 EFEMP1Q12805 493 aa3.53□□□□□ -1.84
CSDE1-209ENST00000525132 STK3Q13188 491 aa3.53□□□□□ -1.84
CSDE1-209ENST00000525132 TMEM132BQ14DG7 1078 aa3.53□□□□□ -1.84
CSDE1-209ENST00000525132 KARSQ15046 597 aaKnown RBP3.53□□□□□ -1.84
CSDE1-209ENST00000525132 MAPRE1Q15691 268 aaKnown RBP3.53□□□□□ -1.84
CSDE1-209ENST00000525132 MTHFSDQ2M296 383 aaKnown RBP3.53□□□□□ -1.84
CSDE1-209ENST00000525132 TRIM71Q2Q1W2 868 aaKnown RBP3.53□□□□□ -1.84
CSDE1-209ENST00000525132 VWA2Q5GFL6 755 aa3.53□□□□□ -1.84
CSDE1-209ENST00000525132 RRP12Q5JTH9 1297 aaKnown RBP3.53□□□□□ -1.84
CSDE1-209ENST00000525132 SPOUT1Q5T280 376 aaKnown RBP3.53□□□□□ -1.84
CSDE1-209ENST00000525132 CCDC70Q6NSX1 233 aa3.53□□□□□ -1.84
CSDE1-209ENST00000525132 B3GNT9Q6UX72 402 aa3.53□□□□□ -1.84
CSDE1-209ENST00000525132 C15orf39Q6ZRI6 1047 aa3.53□□□□□ -1.84
CSDE1-209ENST00000525132 CHST15Q7LFX5 561 aaPredicted RBP3.53□□□□□ -1.84
CSDE1-209ENST00000525132 CATIPQ7Z7H3 387 aa3.53□□□□□ -1.84
CSDE1-209ENST00000525132 CMIPQ8IY22 773 aa3.53□□□□□ -1.84
CSDE1-209ENST00000525132 AMOTL1Q8IY63 956 aa3.53□□□□□ -1.84
CSDE1-209ENST00000525132 ZNF610Q8N9Z0 462 aa3.53□□□□□ -1.84
CSDE1-209ENST00000525132 MRPS27Q92552 414 aaKnown RBP3.53□□□□□ -1.84
CSDE1-209ENST00000525132 SGF29Q96ES7 293 aa3.53□□□□□ -1.84
CSDE1-209ENST00000525132 SCLT1Q96NL6 688 aa3.53□□□□□ -1.84
CSDE1-209ENST00000525132 C19orf24Q9BVV8 132 aa3.53□□□□□ -1.84
CSDE1-209ENST00000525132 TMEM168Q9H0V1 697 aa3.53□□□□□ -1.84
CSDE1-209ENST00000525132 MS4A5Q9H3V2 200 aa3.53□□□□□ -1.84
CSDE1-209ENST00000525132 ZHX3Q9H4I2 956 aa3.53□□□□□ -1.84
CSDE1-209ENST00000525132 L2HGDHQ9H9P8 463 aa3.53□□□□□ -1.84
CSDE1-209ENST00000525132 PPP4R1LQ9P1A2 415 aa3.53□□□□□ -1.84
CSDE1-209ENST00000525132 ARHGAP28Q9P2N2 729 aa3.53□□□□□ -1.84
CSDE1-209ENST00000525132 FTSJ1Q9UET6 329 aa3.53□□□□□ -1.84
CSDE1-209ENST00000525132 FBXO10Q9UK96 956 aa3.53□□□□□ -1.84
CSDE1-209ENST00000525132 DNM3Q9UQ16 869 aa3.53□□□□□ -1.84
CSDE1-209ENST00000525132 DMTF1Q9Y222 760 aa3.53□□□□□ -1.84
CSDE1-209ENST00000525132 LZTS1Q9Y250 596 aa3.53□□□□□ -1.84
CSDE1-209ENST00000525132 THADAQ6YHU6 1953 aa3.52□□□□□ -1.85
CSDE1-209ENST00000525132 SHANK1Q9Y566 2161 aa3.52□□□□□ -1.85
CSDE1-209ENST00000525132 A0A0A6YYK5 440 aaPredicted RBP3.52□□□□□ -1.85
CSDE1-209ENST00000525132 ESYT2A0FGR8 921 aa3.52□□□□□ -1.85
CSDE1-209ENST00000525132 PMS2P1A4D2B8 440 aa3.52□□□□□ -1.85
CSDE1-209ENST00000525132 RSPH10B2B2RC85 870 aa3.52□□□□□ -1.85
CSDE1-209ENST00000525132 F5H423 210 aaPredicted RBP3.52□□□□□ -1.85
CSDE1-209ENST00000525132 H2AFYO75367 372 aaKnown RBP3.52□□□□□ -1.85
CSDE1-209ENST00000525132 OFD1O75665 1012 aa3.52□□□□□ -1.85
CSDE1-209ENST00000525132 SERPINF2P08697 491 aa3.52□□□□□ -1.85
CSDE1-209ENST00000525132 RSPH10BP0C881 870 aa3.52□□□□□ -1.85
CSDE1-209ENST00000525132 SETSIPP0DME0 302 aa3.52□□□□□ -1.85
CSDE1-209ENST00000525132 MYBP10242 640 aa3.52□□□□□ -1.85
CSDE1-209ENST00000525132 AKAP5P24588 427 aa3.52□□□□□ -1.85
CSDE1-209ENST00000525132 CCNE1P24864 410 aa3.52□□□□□ -1.85
CSDE1-209ENST00000525132 APEX1P27695 318 aaKnown RBP3.52□□□□□ -1.85
CSDE1-209ENST00000525132 MAN1A1P33908 653 aa3.52□□□□□ -1.85
CSDE1-209ENST00000525132 PTGER3P43115 390 aa3.52□□□□□ -1.85
CSDE1-209ENST00000525132 GPR3P46089 330 aa3.52□□□□□ -1.85
CSDE1-209ENST00000525132 GATMP50440 423 aa3.52□□□□□ -1.85
CSDE1-209ENST00000525132 IST1P53990 364 aa3.52□□□□□ -1.85
CSDE1-209ENST00000525132 USP14P54578 494 aa3.52□□□□□ -1.85
CSDE1-209ENST00000525132 ANTXR2P58335 489 aa3.52□□□□□ -1.85
CSDE1-209ENST00000525132 LLGL1Q15334 1064 aa3.52□□□□□ -1.85
CSDE1-209ENST00000525132 ALFQ53S48 1182 aa3.52□□□□□ -1.85
CSDE1-209ENST00000525132 KRBA2Q6ZNG9 492 aa3.52□□□□□ -1.85
CSDE1-209ENST00000525132 PCGF5Q86SE9 256 aa3.52□□□□□ -1.85
CSDE1-209ENST00000525132 RASSF3Q86WH2 238 aa3.52□□□□□ -1.85
CSDE1-209ENST00000525132 KBTBD2Q8IY47 623 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms