RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 VIRMAQ69YN4 1812 aaKnown RBP2.05□□□□□ -2.08
CD44-212ENST00000524922 TUBGCP6Q96RT7 1819 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 TRIOBPQ9H2D6 2365 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 LOC102723971A0A1B0GUV8 181 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 A0A1W2PPL8 197 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 MBD3L4A6NDZ8 208 aaPredicted RBP2.05□□□□□ -2.08
CD44-212ENST00000524922 MBD3L3A6NE82 208 aaPredicted RBP2.05□□□□□ -2.08
CD44-212ENST00000524922 C2CD4BA6NLJ0 364 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 A8MVJ9 347 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 PYCARD-AS1I3L0S3 204 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 MYO1CO00159 1063 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 CLIC1O00299 241 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 FRS3O43559 492 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 CBFA2T3O75081 653 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 ATG13O75143 517 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 RFPL1O75677 317 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 ALDH1L1O75891 902 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 MYBP10242 640 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 PLA2G2AP14555 144 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 PHKG2P15735 406 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 CREB1P16220 341 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 PTDSS1P48651 473 aaKnown RBP2.05□□□□□ -2.08
CD44-212ENST00000524922 RAB27AP51159 221 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 RPS13P62277 151 aaKnown RBP2.05□□□□□ -2.08
CD44-212ENST00000524922 B4GALNT1Q00973 533 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 MTAPQ13126 283 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 KCNB1Q14721 858 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 TTF1Q15361 905 aaPredicted RBP2.05□□□□□ -2.08
CD44-212ENST00000524922 EARS2Q5JPH6 523 aaKnown RBP2.05□□□□□ -2.08
CD44-212ENST00000524922 TTLL5Q6EMB2 1281 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 KIAA1161Q6NSJ0 714 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 TMEM65Q6PI78 240 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 DAAM2Q86T65 1068 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 RAB11FIP4Q86YS3 637 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 SPARTQ8N0X7 666 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 MMP21Q8N119 569 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 C12orf76Q8N812 135 aaPredicted RBP2.05□□□□□ -2.08
CD44-212ENST00000524922 PNPLA1Q8N8W4 532 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 ACRBPQ8NEB7 543 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 JPH3Q8WXH2 748 aaPredicted RBP2.05□□□□□ -2.08
CD44-212ENST00000524922 CUL5Q93034 780 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 SPSB4Q96A44 273 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 PRR11Q96HE9 360 aaPredicted RBP2.05□□□□□ -2.08
CD44-212ENST00000524922 CTAGE1Q96RT6 745 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 AS3MTQ9HBK9 375 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 SEMA4BQ9NPR2 832 aaPredicted RBP2.05□□□□□ -2.08
CD44-212ENST00000524922 SNX15Q9NRS6 342 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 VPS45Q9NRW7 570 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 TYW1Q9NV66 732 aaKnown RBP2.05□□□□□ -2.08
CD44-212ENST00000524922 CPNE7Q9UBL6 633 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 MGAT4CQ9UBM8 478 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 L1RE1Q9UN81 338 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 USP22Q9UPT9 525 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 TTC21BQ7Z4L5 1316 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 COL15A1P39059 1388 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 ZNF609O15014 1411 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 EDC4Q6P2E9 1401 aaKnown RBP2.05□□□□□ -2.08
CD44-212ENST00000524922 MEGF6O75095 1541 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 HTTP42858 3142 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 LTBP1Q14766 1721 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 TOGARAM1Q9Y4F4 1720 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 UBR3Q6ZT12 1888 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 PKD1L2Q7Z442 2459 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 COL6A3P12111 3177 aa2.04□□□□□ -2.08
CD44-212ENST00000524922 CENPFP49454 3210 aa2.04□□□□□ -2.08
CD44-212ENST00000524922 A0A1W2PP64 1363 aa2.04□□□□□ -2.08
CD44-212ENST00000524922 C4orf47A7E2U8 309 aa2.04□□□□□ -2.08
CD44-212ENST00000524922 B4DGG1 531 aa2.04□□□□□ -2.08
CD44-212ENST00000524922 RGPD8O14715 1765 aaPredicted RBP2.04□□□□□ -2.08
CD44-212ENST00000524922 FYB1O15117 783 aa2.04□□□□□ -2.08
CD44-212ENST00000524922 PRPF3O43395 683 aaKnown RBP2.04□□□□□ -2.08
CD44-212ENST00000524922 EPN2O95208 641 aa2.04□□□□□ -2.08
CD44-212ENST00000524922 CRYABP02511 175 aaKnown RBP2.04□□□□□ -2.08
CD44-212ENST00000524922 MMP10P09238 476 aa2.04□□□□□ -2.08
CD44-212ENST00000524922 MAP2P11137 1827 aaKnown RBP2.04□□□□□ -2.08
CD44-212ENST00000524922 HOXB2P14652 356 aa2.04□□□□□ -2.08
CD44-212ENST00000524922 KLRC1P26715 233 aa2.04□□□□□ -2.08
CD44-212ENST00000524922 NTSR1P30989 418 aa2.04□□□□□ -2.08
CD44-212ENST00000524922 HOXA7P31268 230 aaPredicted RBP2.04□□□□□ -2.08
CD44-212ENST00000524922 IDUAP35475 653 aa2.04□□□□□ -2.08
CD44-212ENST00000524922 ME1P48163 572 aa2.04□□□□□ -2.08
CD44-212ENST00000524922 MMP14P50281 582 aa2.04□□□□□ -2.08
CD44-212ENST00000524922 GATMP50440 423 aa2.04□□□□□ -2.08
CD44-212ENST00000524922 LBX1P52954 281 aa2.04□□□□□ -2.08
CD44-212ENST00000524922 TMF1P82094 1093 aa2.04□□□□□ -2.08
CD44-212ENST00000524922 HSF1Q00613 529 aa2.04□□□□□ -2.08
CD44-212ENST00000524922 SATB1Q01826 763 aa2.04□□□□□ -2.08
CD44-212ENST00000524922 RAB32Q13637 225 aa2.04□□□□□ -2.08
CD44-212ENST00000524922 MFSD13AQ14CX5 517 aa2.04□□□□□ -2.08
CD44-212ENST00000524922 DEFB115Q30KQ5 88 aa2.04□□□□□ -2.08
CD44-212ENST00000524922 RIC1Q4ADV7 1423 aa2.04□□□□□ -2.08
CD44-212ENST00000524922 TMEM63BQ5T3F8 832 aa2.04□□□□□ -2.08
CD44-212ENST00000524922 MANEALQ5VSG8 457 aa2.04□□□□□ -2.08
CD44-212ENST00000524922 ANKRD13BQ86YJ7 626 aa2.04□□□□□ -2.08
CD44-212ENST00000524922 MPP5Q8N3R9 675 aa2.04□□□□□ -2.08
CD44-212ENST00000524922 SMRP1Q8NCR6 262 aa2.04□□□□□ -2.08
CD44-212ENST00000524922 MPLKIPQ8TAP9 179 aa2.04□□□□□ -2.08
CD44-212ENST00000524922 ZCRB1Q8TBF4 217 aaKnown RBP2.04□□□□□ -2.08
CD44-212ENST00000524922 IP6K1Q92551 441 aa2.04□□□□□ -2.08
CD44-212ENST00000524922 ZDHHC12Q96GR4 267 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms