RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 GMPSP49915 693 aaPredicted RBP3.48□□□□□ -1.85
CSDE1-208ENST00000524652 PLCD1P51178 756 aa3.48□□□□□ -1.85
CSDE1-208ENST00000524652 MYO1EQ12965 1108 aa3.48□□□□□ -1.85
CSDE1-208ENST00000524652 CAVIN4Q5BKX8 364 aa3.48□□□□□ -1.85
CSDE1-208ENST00000524652 ATAT1Q5SQI0 421 aa3.48□□□□□ -1.85
CSDE1-208ENST00000524652 TTC39AQ5SRH9 613 aa3.48□□□□□ -1.85
CSDE1-208ENST00000524652 TTC22Q5TAA0 569 aa3.48□□□□□ -1.85
CSDE1-208ENST00000524652 TTLL5Q6EMB2 1281 aa3.48□□□□□ -1.85
CSDE1-208ENST00000524652 DLK2Q6UY11 383 aa3.48□□□□□ -1.85
CSDE1-208ENST00000524652 SLC15A3Q8IY34 581 aa3.48□□□□□ -1.85
CSDE1-208ENST00000524652 SPATA5Q8NB90 893 aa3.48□□□□□ -1.85
CSDE1-208ENST00000524652 PIGOQ8TEQ8 1089 aa3.48□□□□□ -1.85
CSDE1-208ENST00000524652 OSCP1Q8WVF1 389 aa3.48□□□□□ -1.85
CSDE1-208ENST00000524652 HPS3Q969F9 1004 aa3.48□□□□□ -1.85
CSDE1-208ENST00000524652 NSUN4Q96CB9 384 aaKnown RBP3.48□□□□□ -1.85
CSDE1-208ENST00000524652 RSPRY1Q96DX4 576 aa3.48□□□□□ -1.85
CSDE1-208ENST00000524652 HMCESQ96FZ2 354 aa3.48□□□□□ -1.85
CSDE1-208ENST00000524652 ZBED3Q96IU2 234 aaPredicted RBP3.48□□□□□ -1.85
CSDE1-208ENST00000524652 C5orf34Q96MH7 638 aa3.48□□□□□ -1.85
CSDE1-208ENST00000524652 SEC62Q99442 399 aaKnown RBP3.48□□□□□ -1.85
CSDE1-208ENST00000524652 MAP3K14Q99558 947 aa3.48□□□□□ -1.85
CSDE1-208ENST00000524652 MESP1Q9BRJ9 268 aa3.48□□□□□ -1.85
CSDE1-208ENST00000524652 PCDH12Q9NPG4 1184 aa3.48□□□□□ -1.85
CSDE1-208ENST00000524652 NMRK2Q9NPI5 230 aa3.48□□□□□ -1.85
CSDE1-208ENST00000524652 PDGFCQ9NRA1 345 aa3.48□□□□□ -1.85
CSDE1-208ENST00000524652 HOMER2Q9NSB8 354 aa3.48□□□□□ -1.85
CSDE1-208ENST00000524652 ECHDC1Q9NTX5 307 aa3.48□□□□□ -1.85
CSDE1-208ENST00000524652 ELOVL5Q9NYP7 299 aa3.48□□□□□ -1.85
CSDE1-208ENST00000524652 PCDHA6Q9UN73 950 aa3.48□□□□□ -1.85
CSDE1-208ENST00000524652 SCAF8Q9UPN6 1271 aaKnown RBP3.48□□□□□ -1.85
CSDE1-208ENST00000524652 TMX2Q9Y320 296 aa3.48□□□□□ -1.85
CSDE1-208ENST00000524652 COL4A3BPQ9Y5P4 624 aa3.48□□□□□ -1.85
CSDE1-208ENST00000524652 RFX7Q2KHR2 1363 aa3.48□□□□□ -1.85
CSDE1-208ENST00000524652 MKI67P46013 3256 aaKnown RBP3.48□□□□□ -1.85
CSDE1-208ENST00000524652 PDS5AQ29RF7 1337 aaKnown RBP3.47□□□□□ -1.85
CSDE1-208ENST00000524652 TTC41PQ6P2S7 1318 aa3.47□□□□□ -1.85
CSDE1-208ENST00000524652 SSC5DA1L4H1 1573 aa3.47□□□□□ -1.85
CSDE1-208ENST00000524652 KCNU1A8MYU2 1149 aa3.47□□□□□ -1.85
CSDE1-208ENST00000524652 E5RJQ4 531 aa3.47□□□□□ -1.85
CSDE1-208ENST00000524652 MYO1CO00159 1063 aa3.47□□□□□ -1.85
CSDE1-208ENST00000524652 GOLIM4O00461 696 aa3.47□□□□□ -1.85
CSDE1-208ENST00000524652 TRIM38O00635 465 aa3.47□□□□□ -1.85
CSDE1-208ENST00000524652 ALDH2P05091 517 aa3.47□□□□□ -1.85
CSDE1-208ENST00000524652 UQCRFS1P1P0C7P4 283 aa3.47□□□□□ -1.85
CSDE1-208ENST00000524652 ARHGAP25P42331 645 aa3.47□□□□□ -1.85
CSDE1-208ENST00000524652 NR4A2P43354 598 aa3.47□□□□□ -1.85
CSDE1-208ENST00000524652 SLC11A2P49281 568 aa3.47□□□□□ -1.85
CSDE1-208ENST00000524652 NEK2P51955 445 aa3.47□□□□□ -1.85
CSDE1-208ENST00000524652 UCP3P55916 312 aa3.47□□□□□ -1.85
CSDE1-208ENST00000524652 RAB1AP62820 205 aa3.47□□□□□ -1.85
CSDE1-208ENST00000524652 FKBP1AP62942 108 aaKnown RBP3.47□□□□□ -1.85
CSDE1-208ENST00000524652 DYNLL1P63167 89 aaKnown RBP3.47□□□□□ -1.85
CSDE1-208ENST00000524652 MECOMQ03112 1051 aa3.47□□□□□ -1.85
CSDE1-208ENST00000524652 MGAT5BQ3V5L5 792 aa3.47□□□□□ -1.85
CSDE1-208ENST00000524652 CCDC158Q5M9N0 1113 aa3.47□□□□□ -1.85
CSDE1-208ENST00000524652 DEPDC1Q5TB30 811 aa3.47□□□□□ -1.85
CSDE1-208ENST00000524652 PXDC1Q5TGL8 231 aa3.47□□□□□ -1.85
CSDE1-208ENST00000524652 FCRL6Q6DN72 434 aa3.47□□□□□ -1.85
CSDE1-208ENST00000524652 MIS18BP1Q6P0N0 1132 aa3.47□□□□□ -1.85
CSDE1-208ENST00000524652 GAS2L3Q86XJ1 694 aa3.47□□□□□ -1.85
CSDE1-208ENST00000524652 GPC2Q8N158 579 aa3.47□□□□□ -1.85
CSDE1-208ENST00000524652 TERB1Q8NA31 727 aa3.47□□□□□ -1.85
CSDE1-208ENST00000524652 JDP2Q8WYK2 163 aa3.47□□□□□ -1.85
CSDE1-208ENST00000524652 C1GALT1C1Q96EU7 318 aa3.47□□□□□ -1.85
CSDE1-208ENST00000524652 LENG8Q96PV6 779 aaPredicted RBP3.47□□□□□ -1.85
CSDE1-208ENST00000524652 TMX4Q9H1E5 349 aaPredicted RBP3.47□□□□□ -1.85
CSDE1-208ENST00000524652 CXorf36Q9H7Y0 433 aa3.47□□□□□ -1.85
CSDE1-208ENST00000524652 TRMT13Q9NUP7 481 aaKnown RBP3.47□□□□□ -1.85
CSDE1-208ENST00000524652 PAG1Q9NWQ8 432 aa3.47□□□□□ -1.85
CSDE1-208ENST00000524652 PIH1D1Q9NWS0 290 aaKnown RBP3.47□□□□□ -1.85
CSDE1-208ENST00000524652 SMCHD1A6NHR9 2005 aa3.47□□□□□ -1.85
CSDE1-208ENST00000524652 CNTNAP1P78357 1384 aa3.47□□□□□ -1.85
CSDE1-208ENST00000524652 COL11A1P12107 1806 aaPredicted RBP3.47□□□□□ -1.85
CSDE1-208ENST00000524652 GAKO14976 1311 aa3.46□□□□□ -1.85
CSDE1-208ENST00000524652 MYH6P13533 1939 aa3.46□□□□□ -1.85
CSDE1-208ENST00000524652 CACNA1IQ9P0X4 2223 aa3.46□□□□□ -1.86
CSDE1-208ENST00000524652 A0A088AWK7 358 aa3.46□□□□□ -1.86
CSDE1-208ENST00000524652 A0A0D9SFI3 127 aa3.46□□□□□ -1.86
CSDE1-208ENST00000524652 hCG_1984214I3L0E3 225 aa3.46□□□□□ -1.86
CSDE1-208ENST00000524652 FRAT2O75474 233 aaPredicted RBP3.46□□□□□ -1.86
CSDE1-208ENST00000524652 NTN1O95631 604 aa3.46□□□□□ -1.86
CSDE1-208ENST00000524652 CYP2A6P11509 494 aaPredicted RBP3.46□□□□□ -1.86
CSDE1-208ENST00000524652 MYCLP12524 364 aaPredicted RBP3.46□□□□□ -1.86
CSDE1-208ENST00000524652 ADD2P35612 726 aa3.46□□□□□ -1.86
CSDE1-208ENST00000524652 RENBPP51606 427 aa3.46□□□□□ -1.86
CSDE1-208ENST00000524652 DGKEP52429 567 aa3.46□□□□□ -1.86
CSDE1-208ENST00000524652 CACNB3P54284 484 aa3.46□□□□□ -1.86
CSDE1-208ENST00000524652 RHBDL3P58872 404 aa3.46□□□□□ -1.86
CSDE1-208ENST00000524652 KRT17Q04695 432 aa3.46□□□□□ -1.86
CSDE1-208ENST00000524652 BRDTQ58F21 947 aaPredicted RBP3.46□□□□□ -1.86
CSDE1-208ENST00000524652 L1TD1Q5T7N2 865 aaKnown RBP3.46□□□□□ -1.86
CSDE1-208ENST00000524652 GORABQ5T7V8 394 aa3.46□□□□□ -1.86
CSDE1-208ENST00000524652 AWAT2Q6E213 333 aa3.46□□□□□ -1.86
CSDE1-208ENST00000524652 APOBEC3HQ6NTF7 200 aaKnown RBP3.46□□□□□ -1.86
CSDE1-208ENST00000524652 ZNF813Q6ZN06 617 aa3.46□□□□□ -1.86
CSDE1-208ENST00000524652 CCDC129Q6ZRS4 1044 aa3.46□□□□□ -1.86
CSDE1-208ENST00000524652 TECPR1Q7Z6L1 1165 aa3.46□□□□□ -1.86
CSDE1-208ENST00000524652 ZNF589Q86UQ0 364 aaPredicted RBP3.46□□□□□ -1.86
CSDE1-208ENST00000524652 CNGA4Q8IV77 575 aa3.46□□□□□ -1.86
CSDE1-208ENST00000524652 ABRAQ8N0Z2 381 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms