RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 HDAC4P56524 1084 aa12.38□□□□□ -0.43
CLN8-207ENST00000524258 CSTF1Q05048 431 aaKnown RBP12.38□□□□□ -0.43
CLN8-207ENST00000524258 MAMLD1Q13495 774 aa12.38□□□□□ -0.43
CLN8-207ENST00000524258 C2orf27AQ580R0 203 aa12.38□□□□□ -0.43
CLN8-207ENST00000524258 BRMS1LQ5PSV4 323 aa12.38□□□□□ -0.43
CLN8-207ENST00000524258 EGFLAMQ63HQ2 1017 aa12.38□□□□□ -0.43
CLN8-207ENST00000524258 RAP1GAP2Q684P5 730 aa12.38□□□□□ -0.43
CLN8-207ENST00000524258 FBXL22Q6P050 247 aa12.38□□□□□ -0.43
CLN8-207ENST00000524258 TMEM92Q6UXU6 159 aa12.38□□□□□ -0.43
CLN8-207ENST00000524258 ADIPOR2Q86V24 386 aa12.38□□□□□ -0.43
CLN8-207ENST00000524258 ARFGAP1Q8N6T3 406 aa12.38□□□□□ -0.43
CLN8-207ENST00000524258 ATP6V0D2Q8N8Y2 350 aa12.38□□□□□ -0.43
CLN8-207ENST00000524258 FIBINQ8TAL6 211 aa12.38□□□□□ -0.43
CLN8-207ENST00000524258 KCNV2Q8TDN2 545 aa12.38□□□□□ -0.43
CLN8-207ENST00000524258 DDI1Q8WTU0 396 aa12.38□□□□□ -0.43
CLN8-207ENST00000524258 IGSF8Q969P0 613 aa12.38□□□□□ -0.43
CLN8-207ENST00000524258 ACOX2Q99424 681 aa12.38□□□□□ -0.43
CLN8-207ENST00000524258 MAGEB5Q9BZ81 275 aa12.38□□□□□ -0.43
CLN8-207ENST00000524258 TRIM7Q9C029 511 aa12.38□□□□□ -0.43
CLN8-207ENST00000524258 ZDHHC4Q9NPG8 344 aa12.38□□□□□ -0.43
CLN8-207ENST00000524258 SEPT11Q9NVA2 429 aaKnown RBP12.38□□□□□ -0.43
CLN8-207ENST00000524258 FAM86C1Q9NVL1 165 aa12.38□□□□□ -0.43
CLN8-207ENST00000524258 COX16Q9P0S2 106 aa12.38□□□□□ -0.43
CLN8-207ENST00000524258 ADAMTS1Q9UHI8 967 aa12.38□□□□□ -0.43
CLN8-207ENST00000524258 INTS6Q9UL03 887 aaKnown RBP12.38□□□□□ -0.43
CLN8-207ENST00000524258 STAP1Q9ULZ2 295 aa12.38□□□□□ -0.43
CLN8-207ENST00000524258 MMP17Q9ULZ9 603 aa12.38□□□□□ -0.43
CLN8-207ENST00000524258 SNX10Q9Y5X0 201 aa12.38□□□□□ -0.43
CLN8-207ENST00000524258 HS3ST4Q9Y661 456 aa12.38□□□□□ -0.43
CLN8-207ENST00000524258 BZW2Q9Y6E2 419 aaKnown RBP12.38□□□□□ -0.43
CLN8-207ENST00000524258 USP34Q70CQ2 3546 aa12.37□□□□□ -0.43
CLN8-207ENST00000524258 IGLV3-10A0A075B6K4 115 aa12.37□□□□□ -0.43
CLN8-207ENST00000524258 DRGXA6NNA5 263 aa12.37□□□□□ -0.43
CLN8-207ENST00000524258 TMCO5BA8MYB1 307 aa12.37□□□□□ -0.43
CLN8-207ENST00000524258 CYBBP04839 570 aa12.37□□□□□ -0.43
CLN8-207ENST00000524258 TPM3P06753 285 aa12.37□□□□□ -0.43
CLN8-207ENST00000524258 TIE1P35590 1138 aa12.37□□□□□ -0.43
CLN8-207ENST00000524258 DEUP1Q05D60 604 aa12.37□□□□□ -0.43
CLN8-207ENST00000524258 ZNF252P-AS1Q0IIN9 211 aa12.37□□□□□ -0.43
CLN8-207ENST00000524258 MAPK8IP2Q13387 824 aaPredicted RBP12.37□□□□□ -0.43
CLN8-207ENST00000524258 AUHQ13825 339 aaKnown RBP12.37□□□□□ -0.43
CLN8-207ENST00000524258 TRIM14Q14142 442 aa12.37□□□□□ -0.43
CLN8-207ENST00000524258 HSF5Q4G112 596 aaPredicted RBP12.37□□□□□ -0.43
CLN8-207ENST00000524258 FSCBQ5H9T9 825 aa12.37□□□□□ -0.43
CLN8-207ENST00000524258 C10orf76Q5T2E6 689 aa12.37□□□□□ -0.43
CLN8-207ENST00000524258 STRADAQ7RTN6 431 aa12.37□□□□□ -0.43
CLN8-207ENST00000524258 LGI2Q8N0V4 545 aa12.37□□□□□ -0.43
CLN8-207ENST00000524258 CFAP52Q8N1V2 620 aa12.37□□□□□ -0.43
CLN8-207ENST00000524258 ALLCQ8N6M5 410 aa12.37□□□□□ -0.43
CLN8-207ENST00000524258 HJURPQ8NCD3 748 aaPredicted RBP12.37□□□□□ -0.43
CLN8-207ENST00000524258 OR8K1Q8NGG5 319 aa12.37□□□□□ -0.43
CLN8-207ENST00000524258 ALG14Q96F25 216 aa12.37□□□□□ -0.43
CLN8-207ENST00000524258 C1orf74Q96LT6 269 aa12.37□□□□□ -0.43
CLN8-207ENST00000524258 DDX50Q9BQ39 737 aaKnown RBP12.37□□□□□ -0.43
CLN8-207ENST00000524258 TKTL2Q9H0I9 626 aa12.37□□□□□ -0.43
CLN8-207ENST00000524258 WDCPQ9H6R7 721 aa12.37□□□□□ -0.43
CLN8-207ENST00000524258 TMEM51Q9NW97 253 aa12.37□□□□□ -0.43
CLN8-207ENST00000524258 ZNF212Q9UDV6 495 aa12.37□□□□□ -0.43
CLN8-207ENST00000524258 OTOGLQ3ZCN5 2332 aa12.37□□□□□ -0.43
CLN8-207ENST00000524258 FANCMQ8IYD8 2048 aa12.37□□□□□ -0.43
CLN8-207ENST00000524258 EP300Q09472 2414 aaPredicted RBP12.36□□□□□ -0.43
CLN8-207ENST00000524258 A0A1W2PQF6 199 aa12.36□□□□□ -0.43
CLN8-207ENST00000524258 TMEM191CA6NGB0 347 aa12.36□□□□□ -0.43
CLN8-207ENST00000524258 ATMINO43313 823 aaPredicted RBP12.36□□□□□ -0.43
CLN8-207ENST00000524258 MFAP3LO75121 409 aa12.36□□□□□ -0.43
CLN8-207ENST00000524258 ATG13O75143 517 aa12.36□□□□□ -0.43
CLN8-207ENST00000524258 KLF8O95600 359 aaPredicted RBP12.36□□□□□ -0.43
CLN8-207ENST00000524258 C7P10643 843 aa12.36□□□□□ -0.43
CLN8-207ENST00000524258 ABCB4P21439 1286 aa12.36□□□□□ -0.43
CLN8-207ENST00000524258 CD70P32970 193 aa12.36□□□□□ -0.43
CLN8-207ENST00000524258 RDXP35241 583 aaKnown RBP12.36□□□□□ -0.43
CLN8-207ENST00000524258 ADRA1BP35368 520 aa12.36□□□□□ -0.43
CLN8-207ENST00000524258 GGCXP38435 758 aa12.36□□□□□ -0.43
CLN8-207ENST00000524258 EIF4A3P38919 411 aaKnown RBP12.36□□□□□ -0.43
CLN8-207ENST00000524258 ZNF75DP51815 510 aa12.36□□□□□ -0.43
CLN8-207ENST00000524258 ZNF143P52747 638 aaPredicted RBP12.36□□□□□ -0.43
CLN8-207ENST00000524258 ADKP55263 362 aaKnown RBP12.36□□□□□ -0.43
CLN8-207ENST00000524258 ATP11AP98196 1134 aa12.36□□□□□ -0.43
CLN8-207ENST00000524258 DMC1Q14565 340 aa12.36□□□□□ -0.43
CLN8-207ENST00000524258 CRY1Q16526 586 aa12.36□□□□□ -0.43
CLN8-207ENST00000524258 PREPLQ4J6C6 727 aaPredicted RBP12.36□□□□□ -0.43
CLN8-207ENST00000524258 MANEALQ5VSG8 457 aa12.36□□□□□ -0.43
CLN8-207ENST00000524258 CXorf57Q6NSI4 855 aaKnown RBP12.36□□□□□ -0.43
CLN8-207ENST00000524258 PPP1R2P3Q6NXS1 205 aa12.36□□□□□ -0.43
CLN8-207ENST00000524258 DNAJC24Q6P3W2 148 aa12.36□□□□□ -0.43
CLN8-207ENST00000524258 CHSY1Q86X52 802 aa12.36□□□□□ -0.43
CLN8-207ENST00000524258 CIR1Q86X95 450 aaPredicted RBP12.36□□□□□ -0.43
CLN8-207ENST00000524258 FAM131BQ86XD5 332 aa12.36□□□□□ -0.43
CLN8-207ENST00000524258 CCDC33Q8N5R6 958 aa12.36□□□□□ -0.43
CLN8-207ENST00000524258 TC2NQ8N9U0 490 aa12.36□□□□□ -0.43
CLN8-207ENST00000524258 TXNDC5Q8NBS9 432 aaKnown RBP12.36□□□□□ -0.43
CLN8-207ENST00000524258 OR52K2Q8NGK3 314 aa12.36□□□□□ -0.43
CLN8-207ENST00000524258 CCDC26Q8TAB7 109 aa12.36□□□□□ -0.43
CLN8-207ENST00000524258 MCEEQ96PE7 176 aa12.36□□□□□ -0.43
CLN8-207ENST00000524258 HAPLN3Q96S86 360 aa12.36□□□□□ -0.43
CLN8-207ENST00000524258 CHP1Q99653 195 aa12.36□□□□□ -0.43
CLN8-207ENST00000524258 GABRG3Q99928 467 aa12.36□□□□□ -0.43
CLN8-207ENST00000524258 SELENOOQ9BVL4 669 aa12.36□□□□□ -0.43
CLN8-207ENST00000524258 FAM126AQ9BYI3 521 aaPredicted RBP12.36□□□□□ -0.43
CLN8-207ENST00000524258 IRF2BPLQ9H1B7 796 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms