RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 E2F5Q15329 346 aa12.96□□□□□ -0.33
CCNC-216ENST00000523961 CCDC14Q49A88 953 aa12.96□□□□□ -0.33
CCNC-216ENST00000523961 RABGAP1LQ5R372 815 aa12.96□□□□□ -0.33
CCNC-216ENST00000523961 EMC10Q5UCC4 262 aa12.96□□□□□ -0.33
CCNC-216ENST00000523961 TTC39BQ5VTQ0 682 aaPredicted RBP12.96□□□□□ -0.33
CCNC-216ENST00000523961 DCUN1D2Q6PH85 259 aa12.96□□□□□ -0.33
CCNC-216ENST00000523961 STRADAQ7RTN6 431 aa12.96□□□□□ -0.33
CCNC-216ENST00000523961 ZNF513Q8N8E2 541 aaPredicted RBP12.96□□□□□ -0.33
CCNC-216ENST00000523961 IL17RCQ8NAC3 791 aa12.96□□□□□ -0.33
CCNC-216ENST00000523961 WFIKKN2Q8TEU8 576 aa12.96□□□□□ -0.33
CCNC-216ENST00000523961 UCMAQ8WVF2 138 aa12.96□□□□□ -0.33
CCNC-216ENST00000523961 DNAJC7Q99615 494 aa12.96□□□□□ -0.33
CCNC-216ENST00000523961 PRMT1Q99873 361 aaKnown RBP12.96□□□□□ -0.33
CCNC-216ENST00000523961 TKTL2Q9H0I9 626 aa12.96□□□□□ -0.33
CCNC-216ENST00000523961 ISCUQ9H1K1 167 aa12.96□□□□□ -0.33
CCNC-216ENST00000523961 PARVAQ9NVD7 372 aa12.96□□□□□ -0.33
CCNC-216ENST00000523961 STIM2Q9P246 746 aa12.96□□□□□ -0.33
CCNC-216ENST00000523961 CLEC4EQ9ULY5 219 aa12.96□□□□□ -0.33
CCNC-216ENST00000523961 MMP17Q9ULZ9 603 aa12.96□□□□□ -0.33
CCNC-216ENST00000523961 KIAA1549LQ6ZVL6 1849 aa12.96□□□□□ -0.33
CCNC-216ENST00000523961 ATG2BQ96BY7 2078 aa12.96□□□□□ -0.33
CCNC-216ENST00000523961 PRRT4C9JH25 899 aa12.95□□□□□ -0.34
CCNC-216ENST00000523961 K7ESF4 209 aa12.95□□□□□ -0.34
CCNC-216ENST00000523961 TIMM44O43615 452 aa12.95□□□□□ -0.34
CCNC-216ENST00000523961 MFAP3LO75121 409 aa12.95□□□□□ -0.34
CCNC-216ENST00000523961 KLF8O95600 359 aaPredicted RBP12.95□□□□□ -0.34
CCNC-216ENST00000523961 PLEKP08567 350 aaPredicted RBP12.95□□□□□ -0.34
CCNC-216ENST00000523961 MYBL1P10243 752 aa12.95□□□□□ -0.34
CCNC-216ENST00000523961 CHRM1P11229 460 aaPredicted RBP12.95□□□□□ -0.34
CCNC-216ENST00000523961 TDGF1P13385 188 aa12.95□□□□□ -0.34
CCNC-216ENST00000523961 DESP17661 470 aa12.95□□□□□ -0.34
CCNC-216ENST00000523961 ZNF143P52747 638 aaPredicted RBP12.95□□□□□ -0.34
CCNC-216ENST00000523961 ATXN1P54253 815 aaKnown RBP12.95□□□□□ -0.34
CCNC-216ENST00000523961 AUHQ13825 339 aaKnown RBP12.95□□□□□ -0.34
CCNC-216ENST00000523961 DMC1Q14565 340 aa12.95□□□□□ -0.34
CCNC-216ENST00000523961 ARID5BQ14865 1188 aa12.95□□□□□ -0.34
CCNC-216ENST00000523961 EIF4HQ15056 248 aaKnown RBP12.95□□□□□ -0.34
CCNC-216ENST00000523961 CDO1Q16878 200 aa12.95□□□□□ -0.34
CCNC-216ENST00000523961 GEN1Q17RS7 908 aa12.95□□□□□ -0.34
CCNC-216ENST00000523961 C15orf59Q2T9L4 293 aaPredicted RBP12.95□□□□□ -0.34
CCNC-216ENST00000523961 EOGTQ5NDL2 527 aa12.95□□□□□ -0.34
CCNC-216ENST00000523961 PPP1R15BQ5SWA1 713 aa12.95□□□□□ -0.34
CCNC-216ENST00000523961 PLEKHA7Q6IQ23 1121 aa12.95□□□□□ -0.34
CCNC-216ENST00000523961 ZC3H14Q6PJT7 736 aaKnown RBP12.95□□□□□ -0.34
CCNC-216ENST00000523961 TSSK4Q6SA08 328 aa12.95□□□□□ -0.34
CCNC-216ENST00000523961 TMC6Q7Z403 805 aa12.95□□□□□ -0.34
CCNC-216ENST00000523961 FAM131BQ86XD5 332 aa12.95□□□□□ -0.34
CCNC-216ENST00000523961 CNGA4Q8IV77 575 aa12.95□□□□□ -0.34
CCNC-216ENST00000523961 MFN1Q8IWA4 741 aa12.95□□□□□ -0.34
CCNC-216ENST00000523961 CCDC33Q8N5R6 958 aa12.95□□□□□ -0.34
CCNC-216ENST00000523961 CAMKK1Q8N5S9 505 aa12.95□□□□□ -0.34
CCNC-216ENST00000523961 ALLCQ8N6M5 410 aa12.95□□□□□ -0.34
CCNC-216ENST00000523961 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.95□□□□□ -0.34
CCNC-216ENST00000523961 TXNDC5Q8NBS9 432 aaKnown RBP12.95□□□□□ -0.34
CCNC-216ENST00000523961 FIBINQ8TAL6 211 aa12.95□□□□□ -0.34
CCNC-216ENST00000523961 CENPIQ92674 756 aaPredicted RBP12.95□□□□□ -0.34
CCNC-216ENST00000523961 NELL1Q92832 810 aa12.95□□□□□ -0.34
CCNC-216ENST00000523961 ZNF653Q96CK0 615 aa12.95□□□□□ -0.34
CCNC-216ENST00000523961 MYEOVQ96EZ4 313 aa12.95□□□□□ -0.34
CCNC-216ENST00000523961 MCEEQ96PE7 176 aa12.95□□□□□ -0.34
CCNC-216ENST00000523961 HAPLN3Q96S86 360 aa12.95□□□□□ -0.34
CCNC-216ENST00000523961 SIK2Q9H0K1 926 aa12.95□□□□□ -0.34
CCNC-216ENST00000523961 C2orf42Q9NWW7 574 aa12.95□□□□□ -0.34
CCNC-216ENST00000523961 ZSCAN32Q9NX65 697 aa12.95□□□□□ -0.34
CCNC-216ENST00000523961 ARHGAP20Q9P2F6 1191 aa12.95□□□□□ -0.34
CCNC-216ENST00000523961 CNOT8Q9UFF9 292 aaKnown RBP12.95□□□□□ -0.34
CCNC-216ENST00000523961 FARP1Q9Y4F1 1045 aaPredicted RBP12.95□□□□□ -0.34
CCNC-216ENST00000523961 HS3ST4Q9Y661 456 aa12.95□□□□□ -0.34
CCNC-216ENST00000523961 A0A087X0T9 212 aa12.94□□□□□ -0.34
CCNC-216ENST00000523961 A0A1B0GVM2 712 aa12.94□□□□□ -0.34
CCNC-216ENST00000523961 ANTXRLA6NF34 631 aa12.94□□□□□ -0.34
CCNC-216ENST00000523961 TCAF2A6NFQ2 919 aa12.94□□□□□ -0.34
CCNC-216ENST00000523961 NPC1O15118 1278 aa12.94□□□□□ -0.34
CCNC-216ENST00000523961 LUC7L3O95232 432 aaKnown RBP12.94□□□□□ -0.34
CCNC-216ENST00000523961 FAM228BP0C875 321 aa12.94□□□□□ -0.34
CCNC-216ENST00000523961 PABPC1P11940 636 aaKnown RBP12.94□□□□□ -0.34
CCNC-216ENST00000523961 HNRNPLP14866 589 aaKnown RBP eCLIP12.94□□□□□ -0.344e-7■■■■□ 24
CCNC-216ENST00000523961 HLA-FP30511 346 aa12.94□□□□□ -0.34
CCNC-216ENST00000523961 NTSR1P30989 418 aa12.94□□□□□ -0.34
CCNC-216ENST00000523961 EIF4A3P38919 411 aaKnown RBP12.94□□□□□ -0.34
CCNC-216ENST00000523961 RPL7AP62424 266 aaKnown RBP12.94□□□□□ -0.34
CCNC-216ENST00000523961 TBX2Q13207 712 aaPredicted RBP12.94□□□□□ -0.34
CCNC-216ENST00000523961 MAMLD1Q13495 774 aa12.94□□□□□ -0.34
CCNC-216ENST00000523961 CDH18Q13634 790 aa12.94□□□□□ -0.34
CCNC-216ENST00000523961 ARL13BQ3SXY8 428 aa12.94□□□□□ -0.34
CCNC-216ENST00000523961 EGFLAMQ63HQ2 1017 aa12.94□□□□□ -0.34
CCNC-216ENST00000523961 SDE2Q6IQ49 451 aa12.94□□□□□ -0.34
CCNC-216ENST00000523961 FBXL22Q6P050 247 aa12.94□□□□□ -0.34
CCNC-216ENST00000523961 ALKBH5Q6P6C2 394 aaKnown RBP12.94□□□□□ -0.34
CCNC-216ENST00000523961 KIAA0907Q7Z7F0 614 aaPredicted RBP12.94□□□□□ -0.34
CCNC-216ENST00000523961 AHI1Q8N157 1196 aa12.94□□□□□ -0.34
CCNC-216ENST00000523961 CFAP52Q8N1V2 620 aa12.94□□□□□ -0.34
CCNC-216ENST00000523961 CARNMT1Q8N4J0 409 aa12.94□□□□□ -0.34
CCNC-216ENST00000523961 FAM172AQ8WUF8 416 aa12.94□□□□□ -0.34
CCNC-216ENST00000523961 MRFAP1L1Q96HT8 127 aa12.94□□□□□ -0.34
CCNC-216ENST00000523961 C1orf74Q96LT6 269 aa12.94□□□□□ -0.34
CCNC-216ENST00000523961 RPRD1AQ96P16 312 aaPredicted RBP12.94□□□□□ -0.34
CCNC-216ENST00000523961 CNPY3Q9BT09 278 aa12.94□□□□□ -0.34
CCNC-216ENST00000523961 MRPL47Q9HD33 250 aaKnown RBP12.94□□□□□ -0.34
CCNC-216ENST00000523961 ABHD10Q9NUJ1 306 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms